RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 ARRDC5A6NEK1 342 aa7.41□□□□□ -1.22
SNRPA1-206ENST00000558059 IQCF6A8MYZ5 107 aa7.41□□□□□ -1.22
SNRPA1-206ENST00000558059 PHF1O43189 567 aaPredicted RBP7.41□□□□□ -1.22
SNRPA1-206ENST00000558059 GYPBP06028 91 aa7.41□□□□□ -1.22
SNRPA1-206ENST00000558059 CLUP10909 449 aa7.41□□□□□ -1.22
SNRPA1-206ENST00000558059 SPI1P17947 270 aa7.41□□□□□ -1.22
SNRPA1-206ENST00000558059 ANOS1P23352 680 aa7.41□□□□□ -1.22
SNRPA1-206ENST00000558059 TNFSF4P23510 183 aa7.41□□□□□ -1.22
SNRPA1-206ENST00000558059 FMO3P31513 532 aa7.41□□□□□ -1.22
SNRPA1-206ENST00000558059 OTX1P32242 354 aaPredicted RBP7.41□□□□□ -1.22
SNRPA1-206ENST00000558059 SLC3A1Q07837 685 aa7.41□□□□□ -1.22
SNRPA1-206ENST00000558059 TEX30Q5JUR7 227 aa7.41□□□□□ -1.22
SNRPA1-206ENST00000558059 LINC01590Q5TEZ4 76 aa7.41□□□□□ -1.22
SNRPA1-206ENST00000558059 ACSM5Q6NUN0 579 aa7.41□□□□□ -1.22
SNRPA1-206ENST00000558059 SPATA24Q86W54 205 aa7.41□□□□□ -1.22
SNRPA1-206ENST00000558059 HS3ST5Q8IZT8 346 aa7.41□□□□□ -1.22
SNRPA1-206ENST00000558059 IQCF1Q8N6M8 205 aa7.41□□□□□ -1.22
SNRPA1-206ENST00000558059 ZNF283Q8N7M2 679 aa7.41□□□□□ -1.22
SNRPA1-206ENST00000558059 PAPD5Q8NDF8 572 aaKnown RBP7.41□□□□□ -1.22
SNRPA1-206ENST00000558059 OR8G5Q8NG78 346 aa7.41□□□□□ -1.22
SNRPA1-206ENST00000558059 OR13G1Q8NGZ3 307 aa7.41□□□□□ -1.22
SNRPA1-206ENST00000558059 OR51F2Q8NH61 342 aa7.41□□□□□ -1.22
SNRPA1-206ENST00000558059 SLCO4A1Q96BD0 722 aa7.41□□□□□ -1.22
SNRPA1-206ENST00000558059 RAB39BQ96DA2 213 aa7.41□□□□□ -1.22
SNRPA1-206ENST00000558059 OR2V2Q96R30 315 aa7.41□□□□□ -1.22
SNRPA1-206ENST00000558059 SIGLEC11Q96RL6 698 aa7.41□□□□□ -1.22
SNRPA1-206ENST00000558059 SLC30A2Q9BRI3 323 aa7.41□□□□□ -1.22
SNRPA1-206ENST00000558059 HCAR1Q9BXC0 346 aa7.41□□□□□ -1.22
SNRPA1-206ENST00000558059 CMC2Q9NRP2 79 aa7.41□□□□□ -1.22
SNRPA1-206ENST00000558059 DDX28Q9NUL7 540 aaKnown RBP7.41□□□□□ -1.22
SNRPA1-206ENST00000558059 TMEM106BQ9NUM4 274 aa7.41□□□□□ -1.22
SNRPA1-206ENST00000558059 PDP1Q9P0J1 537 aaPredicted RBP7.41□□□□□ -1.22
SNRPA1-206ENST00000558059 IL19Q9UHD0 177 aa7.41□□□□□ -1.22
SNRPA1-206ENST00000558059 POMPQ9Y244 141 aa7.41□□□□□ -1.22
SNRPA1-206ENST00000558059 NPTNQ9Y639 398 aa7.41□□□□□ -1.22
SNRPA1-206ENST00000558059 COMMD3-BMI1R4GMX3 469 aa7.41□□□□□ -1.22
SNRPA1-206ENST00000558059 TRAV20A0A0B4J274 112 aa7.4□□□□□ -1.22
SNRPA1-206ENST00000558059 C5orf63A6NC05 138 aa7.4□□□□□ -1.22
SNRPA1-206ENST00000558059 RIIAD1A6NNX1 92 aa7.4□□□□□ -1.22
SNRPA1-206ENST00000558059 RNF212BA8MTL3 300 aa7.4□□□□□ -1.22
SNRPA1-206ENST00000558059 H0YL77 283 aa7.4□□□□□ -1.22
SNRPA1-206ENST00000558059 M0R135 149 aa7.4□□□□□ -1.22
SNRPA1-206ENST00000558059 ZNF593O00488 134 aaPredicted RBP7.4□□□□□ -1.22
SNRPA1-206ENST00000558059 SURF4O15260 269 aa7.4□□□□□ -1.22
SNRPA1-206ENST00000558059 GSC2O15499 205 aa7.4□□□□□ -1.22
SNRPA1-206ENST00000558059 MLNRO43193 412 aa7.4□□□□□ -1.22
SNRPA1-206ENST00000558059 PLPP2O43688 288 aa7.4□□□□□ -1.22
SNRPA1-206ENST00000558059 FKBP6O75344 327 aa7.4□□□□□ -1.22
SNRPA1-206ENST00000558059 DNAJC8O75937 253 aaPredicted RBP7.4□□□□□ -1.22
SNRPA1-206ENST00000558059 IFNGP01579 166 aa7.4□□□□□ -1.22
SNRPA1-206ENST00000558059 IGHV2-70P01814 119 aa7.4□□□□□ -1.22
SNRPA1-206ENST00000558059 LCATP04180 440 aa7.4□□□□□ -1.22
SNRPA1-206ENST00000558059 ANPEPP15144 967 aa7.4□□□□□ -1.22
SNRPA1-206ENST00000558059 HOXB6P17509 224 aaKnown RBP7.4□□□□□ -1.22
SNRPA1-206ENST00000558059 TNFRSF1AP19438 455 aa7.4□□□□□ -1.22
SNRPA1-206ENST00000558059 PCMT1P22061 227 aa7.4□□□□□ -1.22
SNRPA1-206ENST00000558059 GRK5P34947 590 aa7.4□□□□□ -1.22
SNRPA1-206ENST00000558059 ENTPD1P49961 510 aa7.4□□□□□ -1.22
SNRPA1-206ENST00000558059 TPTEP56180 551 aa7.4□□□□□ -1.22
SNRPA1-206ENST00000558059 BNIP1Q12981 228 aa7.4□□□□□ -1.22
SNRPA1-206ENST00000558059 FLOT2Q14254 428 aa7.4□□□□□ -1.22
SNRPA1-206ENST00000558059 GK2Q14410 553 aaPredicted RBP7.4□□□□□ -1.22
SNRPA1-206ENST00000558059 GINS1Q14691 196 aa7.4□□□□□ -1.22
SNRPA1-206ENST00000558059 SLC27A4Q6P1M0 643 aa7.4□□□□□ -1.22
SNRPA1-206ENST00000558059 C1orf229Q6ZS94 237 aaPredicted RBP7.4□□□□□ -1.22
SNRPA1-206ENST00000558059 DCXRQ7Z4W1 244 aa7.4□□□□□ -1.22
SNRPA1-206ENST00000558059 ATG16L2Q8NAA4 619 aa7.4□□□□□ -1.22
SNRPA1-206ENST00000558059 OR10AD1Q8NGE0 317 aa7.4□□□□□ -1.22
SNRPA1-206ENST00000558059 SPATA3Q8NHX4 192 aa7.4□□□□□ -1.22
SNRPA1-206ENST00000558059 TEX47Q8TBZ9 253 aa7.4□□□□□ -1.22
SNRPA1-206ENST00000558059 ST7LQ8TDW4 575 aa7.4□□□□□ -1.22
SNRPA1-206ENST00000558059 ZNF799Q96GE5 643 aa7.4□□□□□ -1.22
SNRPA1-206ENST00000558059 MEGF10Q96KG7 1140 aa7.4□□□□□ -1.22
SNRPA1-206ENST00000558059 ZNF582Q96NG8 517 aaPredicted RBP7.4□□□□□ -1.22
SNRPA1-206ENST00000558059 GAL3ST1Q99999 423 aa7.4□□□□□ -1.22
SNRPA1-206ENST00000558059 CADM1Q9BY67 442 aaKnown RBP7.4□□□□□ -1.22
SNRPA1-206ENST00000558059 MED20Q9H944 212 aa7.4□□□□□ -1.22
SNRPA1-206ENST00000558059 NTN4Q9HB63 628 aa7.4□□□□□ -1.22
SNRPA1-206ENST00000558059 GCM1Q9NP62 436 aa7.4□□□□□ -1.22
SNRPA1-206ENST00000558059 G6PC2Q9NQR9 355 aa7.4□□□□□ -1.22
SNRPA1-206ENST00000558059 PPP1R3CQ9UQK1 317 aa7.4□□□□□ -1.22
SNRPA1-206ENST00000558059 ISPDA4D126 451 aa7.39□□□□□ -1.23
SNRPA1-206ENST00000558059 FAM183AA6NL82 134 aa7.39□□□□□ -1.23
SNRPA1-206ENST00000558059 F5H5P2 479 aa7.39□□□□□ -1.23
SNRPA1-206ENST00000558059 H3BN98 237 aa7.39□□□□□ -1.23
SNRPA1-206ENST00000558059 TMEM178BH3BS89 294 aa7.39□□□□□ -1.23
SNRPA1-206ENST00000558059 GNGT2O14610 69 aa7.39□□□□□ -1.23
SNRPA1-206ENST00000558059 SPARCP09486 303 aa7.39□□□□□ -1.23
SNRPA1-206ENST00000558059 SBK2P0C263 348 aa7.39□□□□□ -1.23
SNRPA1-206ENST00000558059 SELEP16581 610 aa7.39□□□□□ -1.23
SNRPA1-206ENST00000558059 ZNF3P17036 446 aa7.39□□□□□ -1.23
SNRPA1-206ENST00000558059 PRKACGP22612 351 aa7.39□□□□□ -1.23
SNRPA1-206ENST00000558059 POU1F1P28069 291 aa7.39□□□□□ -1.23
SNRPA1-206ENST00000558059 SRP14P37108 136 aaKnown RBP7.39□□□□□ -1.23
SNRPA1-206ENST00000558059 PMELP40967 661 aa7.39□□□□□ -1.23
SNRPA1-206ENST00000558059 BLVRAP53004 296 aa7.39□□□□□ -1.23
SNRPA1-206ENST00000558059 CBX1P83916 185 aa7.39□□□□□ -1.23
SNRPA1-206ENST00000558059 SRSF2Q01130 221 aaKnown RBP7.39□□□□□ -1.23
SNRPA1-206ENST00000558059 ZNF92Q03936 586 aa7.39□□□□□ -1.23
SNRPA1-206ENST00000558059 MALLQ13021 153 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms