RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 OR10H4Q8NGA5 316 aa12.26□□□□□ -0.45
USP3-205ENST00000557884 RHOXF1Q8NHV9 184 aa12.26□□□□□ -0.45
USP3-205ENST00000557884 COG8Q96MW5 612 aa12.26□□□□□ -0.45
USP3-205ENST00000557884 APOL4Q9BPW4 351 aa12.26□□□□□ -0.45
USP3-205ENST00000557884 ADI1Q9BV57 179 aa12.26□□□□□ -0.45
USP3-205ENST00000557884 RAB1BQ9H0U4 201 aa12.26□□□□□ -0.45
USP3-205ENST00000557884 BARX1Q9HBU1 254 aaPredicted RBP12.26□□□□□ -0.45
USP3-205ENST00000557884 CLN6Q9NWW5 311 aa12.26□□□□□ -0.45
USP3-205ENST00000557884 FBXO9Q9UK97 447 aaPredicted RBP12.26□□□□□ -0.45
USP3-205ENST00000557884 IKZF2Q9UKS7 526 aa12.26□□□□□ -0.45
USP3-205ENST00000557884 PRRC2AP48634 2157 aaKnown RBP12.26□□□□□ -0.45
USP3-205ENST00000557884 ZNF469Q96JG9 3925 aaPredicted RBP12.25□□□□□ -0.45
USP3-205ENST00000557884 ZNF670-ZNF695F2Z2N8 137 aa12.25□□□□□ -0.45
USP3-205ENST00000557884 J3QW42 95 aa12.25□□□□□ -0.45
USP3-205ENST00000557884 MAGEB4O15481 346 aaPredicted RBP12.25□□□□□ -0.45
USP3-205ENST00000557884 TBX1O43435 398 aa12.25□□□□□ -0.45
USP3-205ENST00000557884 MTNR1AP48039 350 aa12.25□□□□□ -0.45
USP3-205ENST00000557884 EFNA4P52798 201 aa12.25□□□□□ -0.45
USP3-205ENST00000557884 ZNF121P58317 390 aaPredicted RBP12.25□□□□□ -0.45
USP3-205ENST00000557884 CXCR4P61073 352 aa12.25□□□□□ -0.45
USP3-205ENST00000557884 ADARB1P78563 741 aaKnown RBP12.25□□□□□ -0.45
USP3-205ENST00000557884 POU4F2Q12837 409 aa12.25□□□□□ -0.45
USP3-205ENST00000557884 MALLQ13021 153 aa12.25□□□□□ -0.45
USP3-205ENST00000557884 TMED1Q13445 227 aa12.25□□□□□ -0.45
USP3-205ENST00000557884 SLC25A30Q5SVS4 291 aa12.25□□□□□ -0.45
USP3-205ENST00000557884 GLYATL3Q5SZD4 288 aa12.25□□□□□ -0.45
USP3-205ENST00000557884 ZNF691Q5VV52 312 aa12.25□□□□□ -0.45
USP3-205ENST00000557884 MEDAGQ5VYS4 303 aa12.25□□□□□ -0.45
USP3-205ENST00000557884 SHEQ5VZ18 495 aa12.25□□□□□ -0.45
USP3-205ENST00000557884 TTC23Q5W5X9 447 aa12.25□□□□□ -0.45
USP3-205ENST00000557884 OR2T2Q6IF00 324 aa12.25□□□□□ -0.45
USP3-205ENST00000557884 ZNF322Q6U7Q0 402 aaPredicted RBP12.25□□□□□ -0.45
USP3-205ENST00000557884 FAM57BQ71RH2 274 aa12.25□□□□□ -0.45
USP3-205ENST00000557884 OR2AE1Q8NHA4 323 aa12.25□□□□□ -0.45
USP3-205ENST00000557884 APH1BQ8WW43 257 aa12.25□□□□□ -0.45
USP3-205ENST00000557884 ASB17Q8WXJ9 295 aa12.25□□□□□ -0.45
USP3-205ENST00000557884 Q96MF0 132 aa12.25□□□□□ -0.45
USP3-205ENST00000557884 MSL2Q9HCI7 577 aa12.25□□□□□ -0.45
USP3-205ENST00000557884 AMBNQ9NP70 447 aa12.25□□□□□ -0.45
USP3-205ENST00000557884 GPR160Q9UJ42 338 aa12.25□□□□□ -0.45
USP3-205ENST00000557884 PURGQ9UJV8 347 aaKnown RBP12.25□□□□□ -0.45
USP3-205ENST00000557884 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.25□□□□□ -0.45
USP3-205ENST00000557884 LRP12Q9Y561 859 aa12.25□□□□□ -0.45
USP3-205ENST00000557884 TMEM14AQ9Y6G1 99 aa12.25□□□□□ -0.45
USP3-205ENST00000557884 PLSCR5A0PG75 271 aa12.24□□□□□ -0.45
USP3-205ENST00000557884 TRIM64A6NGJ6 449 aa12.24□□□□□ -0.45
USP3-205ENST00000557884 TRIM64BA6NI03 449 aa12.24□□□□□ -0.45
USP3-205ENST00000557884 ZSCAN5BA6NJL1 495 aa12.24□□□□□ -0.45
USP3-205ENST00000557884 SPRY3O43610 288 aa12.24□□□□□ -0.45
USP3-205ENST00000557884 MPZL2O60487 215 aa12.24□□□□□ -0.45
USP3-205ENST00000557884 ATP6V1G2O95670 118 aa12.24□□□□□ -0.45
USP3-205ENST00000557884 F12P00748 615 aaPredicted RBP12.24□□□□□ -0.45
USP3-205ENST00000557884 ERCC1P07992 297 aaPredicted RBP12.24□□□□□ -0.45
USP3-205ENST00000557884 RAC2P15153 192 aa12.24□□□□□ -0.45
USP3-205ENST00000557884 TUBG1P23258 451 aa12.24□□□□□ -0.45
USP3-205ENST00000557884 CAPGP40121 348 aa12.24□□□□□ -0.45
USP3-205ENST00000557884 ZNF92Q03936 586 aa12.24□□□□□ -0.45
USP3-205ENST00000557884 ZNF91Q05481 1191 aa12.24□□□□□ -0.45
USP3-205ENST00000557884 GK2Q14410 553 aaPredicted RBP12.24□□□□□ -0.45
USP3-205ENST00000557884 CARTPTQ16568 116 aa12.24□□□□□ -0.45
USP3-205ENST00000557884 MOGQ16653 247 aa12.24□□□□□ -0.45
USP3-205ENST00000557884 TSTQ16762 297 aaKnown RBP12.24□□□□□ -0.45
USP3-205ENST00000557884 CLEC12BQ2HXU8 276 aa12.24□□□□□ -0.45
USP3-205ENST00000557884 GFOD2Q3B7J2 385 aa12.24□□□□□ -0.45
USP3-205ENST00000557884 KCTD18Q6PI47 426 aaPredicted RBP12.24□□□□□ -0.45
USP3-205ENST00000557884 FBXW12Q6X9E4 464 aa12.24□□□□□ -0.45
USP3-205ENST00000557884 USP51Q70EK9 711 aa12.24□□□□□ -0.45
USP3-205ENST00000557884 SSX6Q7RTT6 188 aa12.24□□□□□ -0.45
USP3-205ENST00000557884 ZNF525Q8N782 197 aa12.24□□□□□ -0.45
USP3-205ENST00000557884 BHLHE23Q8NDY6 225 aa12.24□□□□□ -0.45
USP3-205ENST00000557884 HAVCR1Q96D42 359 aa12.24□□□□□ -0.45
USP3-205ENST00000557884 PGAM5Q96HS1 289 aa12.24□□□□□ -0.45
USP3-205ENST00000557884 Q96MT0 163 aa12.24□□□□□ -0.45
USP3-205ENST00000557884 OR8B4Q96RC9 309 aa12.24□□□□□ -0.45
USP3-205ENST00000557884 MROQ9BYG7 248 aa12.24□□□□□ -0.45
USP3-205ENST00000557884 MS4A5Q9H3V2 200 aa12.24□□□□□ -0.45
USP3-205ENST00000557884 TUBG2Q9NRH3 451 aa12.24□□□□□ -0.45
USP3-205ENST00000557884 A0A1W2PQL4 384 aaPredicted RBP12.23□□□□□ -0.45
USP3-205ENST00000557884 SNTNA6NMZ2 147 aa12.23□□□□□ -0.45
USP3-205ENST00000557884 C17orf100A8MU93 164 aa12.23□□□□□ -0.45
USP3-205ENST00000557884 WBP4O75554 376 aaKnown RBP12.23□□□□□ -0.45
USP3-205ENST00000557884 NCR1O76036 304 aa12.23□□□□□ -0.45
USP3-205ENST00000557884 APOC1P02654 83 aa12.23□□□□□ -0.45
USP3-205ENST00000557884 MT-ND5P03915 603 aa12.23□□□□□ -0.45
USP3-205ENST00000557884 GNAO1P09471 354 aa12.23□□□□□ -0.45
USP3-205ENST00000557884 KITLGP21583 273 aa12.23□□□□□ -0.45
USP3-205ENST00000557884 MAGEB1P43366 347 aa12.23□□□□□ -0.45
USP3-205ENST00000557884 ZNF81P51508 661 aa12.23□□□□□ -0.45
USP3-205ENST00000557884 MMP15P51511 669 aa12.23□□□□□ -0.45
USP3-205ENST00000557884 AQP4P55087 323 aa12.23□□□□□ -0.45
USP3-205ENST00000557884 PSMA6P60900 246 aaKnown RBP12.23□□□□□ -0.45
USP3-205ENST00000557884 ROM1Q03395 351 aa12.23□□□□□ -0.45
USP3-205ENST00000557884 SMN1Q16637 294 aaKnown RBP12.23□□□□□ -0.45
USP3-205ENST00000557884 PRSS57Q6UWY2 283 aa12.23□□□□□ -0.45
USP3-205ENST00000557884 SPNS3Q6ZMD2 512 aa12.23□□□□□ -0.45
USP3-205ENST00000557884 PLEKHG7Q6ZR37 379 aa12.23□□□□□ -0.45
USP3-205ENST00000557884 PGAP1Q75T13 922 aa12.23□□□□□ -0.45
USP3-205ENST00000557884 RHOUQ7L0Q8 258 aa12.23□□□□□ -0.45
USP3-205ENST00000557884 MRPL21Q7Z2W9 205 aaKnown RBP12.23□□□□□ -0.45
USP3-205ENST00000557884 ZNF679Q8IYX0 411 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms