RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 CRYBB2P43320 205 aa10.63□□□□□ -0.71
SLIRP-209ENST00000557342 GPR6P46095 362 aaPredicted RBP10.63□□□□□ -0.71
SLIRP-209ENST00000557342 CHN2P52757 468 aa10.63□□□□□ -0.71
SLIRP-209ENST00000557342 RAD23AP54725 363 aa10.63□□□□□ -0.71
SLIRP-209ENST00000557342 TMEM33P57088 247 aa10.63□□□□□ -0.71
SLIRP-209ENST00000557342 CDK5R2Q13319 367 aa10.63□□□□□ -0.71
SLIRP-209ENST00000557342 HLXQ14774 488 aaPredicted RBP10.63□□□□□ -0.71
SLIRP-209ENST00000557342 NXNL2Q5VZ03 156 aa10.63□□□□□ -0.71
SLIRP-209ENST00000557342 NAA40Q86UY6 237 aa10.63□□□□□ -0.71
SLIRP-209ENST00000557342 ZNF283Q8N7M2 679 aa10.63□□□□□ -0.71
SLIRP-209ENST00000557342 TCEANCQ8N8B7 351 aa10.63□□□□□ -0.71
SLIRP-209ENST00000557342 BBS1Q8NFJ9 593 aa10.63□□□□□ -0.71
SLIRP-209ENST00000557342 OTOSQ8NHW6 89 aa10.63□□□□□ -0.71
SLIRP-209ENST00000557342 TMEM163Q8TC26 289 aa10.63□□□□□ -0.71
SLIRP-209ENST00000557342 RNF133Q8WVZ7 376 aa10.63□□□□□ -0.71
SLIRP-209ENST00000557342 GTF3AQ92664 365 aaKnown RBP10.63□□□□□ -0.71
SLIRP-209ENST00000557342 STMN2Q93045 179 aa10.63□□□□□ -0.71
SLIRP-209ENST00000557342 ELMOD3Q96FG2 381 aa10.63□□□□□ -0.71
SLIRP-209ENST00000557342 ZNF582Q96NG8 517 aaPredicted RBP10.63□□□□□ -0.71
SLIRP-209ENST00000557342 TEAD3Q99594 435 aa10.63□□□□□ -0.71
SLIRP-209ENST00000557342 RIBC2Q9H4K1 309 aa10.63□□□□□ -0.71
SLIRP-209ENST00000557342 MSL2Q9HCI7 577 aa10.63□□□□□ -0.71
SLIRP-209ENST00000557342 USE1Q9NZ43 259 aa10.63□□□□□ -0.71
SLIRP-209ENST00000557342 SLC22A31A6NKX4 558 aa10.62□□□□□ -0.71
SLIRP-209ENST00000557342 IQCF6A8MYZ5 107 aa10.62□□□□□ -0.71
SLIRP-209ENST00000557342 LYNX1G3V0Z9 82 aa10.62□□□□□ -0.71
SLIRP-209ENST00000557342 CD5LO43866 347 aa10.62□□□□□ -0.71
SLIRP-209ENST00000557342 SELENOFO60613 162 aa10.62□□□□□ -0.71
SLIRP-209ENST00000557342 ALPLP05186 524 aa10.62□□□□□ -0.71
SLIRP-209ENST00000557342 TACSTD2P09758 323 aa10.62□□□□□ -0.71
SLIRP-209ENST00000557342 H2BFMP0C1H6 154 aa10.62□□□□□ -0.71
SLIRP-209ENST00000557342 LYNX1P0DP58 116 aa10.62□□□□□ -0.71
SLIRP-209ENST00000557342 TNFRSF1AP19438 455 aa10.62□□□□□ -0.71
SLIRP-209ENST00000557342 EPHA2P29317 976 aa10.62□□□□□ -0.71
SLIRP-209ENST00000557342 ALDH3A2P51648 485 aa10.62□□□□□ -0.71
SLIRP-209ENST00000557342 PRKXP51817 358 aa10.62□□□□□ -0.71
SLIRP-209ENST00000557342 RIPPLY3P57055 190 aa10.62□□□□□ -0.71
SLIRP-209ENST00000557342 TNFAIP6P98066 277 aaPredicted RBP10.62□□□□□ -0.71
SLIRP-209ENST00000557342 EFNB1P98172 346 aa10.62□□□□□ -0.71
SLIRP-209ENST00000557342 TMEM249Q2WGJ8 235 aa10.62□□□□□ -0.71
SLIRP-209ENST00000557342 HFEQ30201 348 aa10.62□□□□□ -0.71
SLIRP-209ENST00000557342 OR2T2Q6IF00 324 aa10.62□□□□□ -0.71
SLIRP-209ENST00000557342 USP51Q70EK9 711 aa10.62□□□□□ -0.71
SLIRP-209ENST00000557342 PGAP1Q75T13 922 aa10.62□□□□□ -0.71
SLIRP-209ENST00000557342 SPATC1Q76KD6 591 aa10.62□□□□□ -0.71
SLIRP-209ENST00000557342 MEPCEQ7L2J0 689 aaKnown RBP10.62□□□□□ -0.71
SLIRP-209ENST00000557342 SLC16A9Q7RTY1 509 aa10.62□□□□□ -0.71
SLIRP-209ENST00000557342 MRPL21Q7Z2W9 205 aaKnown RBP10.62□□□□□ -0.71
SLIRP-209ENST00000557342 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.62□□□□□ -0.71
SLIRP-209ENST00000557342 GID4Q8IVV7 300 aa10.62□□□□□ -0.71
SLIRP-209ENST00000557342 OR8G5Q8NG78 346 aa10.62□□□□□ -0.71
SLIRP-209ENST00000557342 OR2Z1Q8NG97 314 aa10.62□□□□□ -0.71
SLIRP-209ENST00000557342 OR13G1Q8NGZ3 307 aa10.62□□□□□ -0.71
SLIRP-209ENST00000557342 THEM6Q8WUY1 208 aa10.62□□□□□ -0.71
SLIRP-209ENST00000557342 YIPF5Q969M3 257 aa10.62□□□□□ -0.71
SLIRP-209ENST00000557342 C9orf16Q9BUW7 83 aa10.62□□□□□ -0.71
SLIRP-209ENST00000557342 YIPF3Q9GZM5 350 aa10.62□□□□□ -0.71
SLIRP-209ENST00000557342 OPA3Q9H6K4 179 aa10.62□□□□□ -0.71
SLIRP-209ENST00000557342 ZNF275Q9NSD4 429 aaPredicted RBP10.62□□□□□ -0.71
SLIRP-209ENST00000557342 LAMP5Q9UJQ1 280 aa10.62□□□□□ -0.71
SLIRP-209ENST00000557342 MAP1AP78559 2803 aaPredicted RBP10.62□□□□□ -0.71
SLIRP-209ENST00000557342 IGHV4-61A0A0C4DH41 118 aa10.61□□□□□ -0.71
SLIRP-209ENST00000557342 CCDC182A6NF36 153 aa10.61□□□□□ -0.71
SLIRP-209ENST00000557342 EI24O14681 340 aa10.61□□□□□ -0.71
SLIRP-209ENST00000557342 PPIHO43447 177 aaKnown RBP10.61□□□□□ -0.71
SLIRP-209ENST00000557342 XRCC2O43543 280 aa10.61□□□□□ -0.71
SLIRP-209ENST00000557342 CDC14BO60729 498 aa10.61□□□□□ -0.71
SLIRP-209ENST00000557342 RP2O75695 350 aa10.61□□□□□ -0.71
SLIRP-209ENST00000557342 ANXA2P07355 339 aaKnown RBP10.61□□□□□ -0.71
SLIRP-209ENST00000557342 OPRL1P41146 370 aa10.61□□□□□ -0.71
SLIRP-209ENST00000557342 NAA10P41227 235 aaPredicted RBP10.61□□□□□ -0.71
SLIRP-209ENST00000557342 CX3CR1P49238 355 aa10.61□□□□□ -0.71
SLIRP-209ENST00000557342 GZMKP49863 264 aa10.61□□□□□ -0.71
SLIRP-209ENST00000557342 CDC42P60953 191 aa10.61□□□□□ -0.71
SLIRP-209ENST00000557342 SLC3A1Q07837 685 aa10.61□□□□□ -0.71
SLIRP-209ENST00000557342 RIPK1Q13546 671 aa10.61□□□□□ -0.71
SLIRP-209ENST00000557342 GK2Q14410 553 aaPredicted RBP10.61□□□□□ -0.71
SLIRP-209ENST00000557342 SNAI3Q3KNW1 292 aa10.61□□□□□ -0.71
SLIRP-209ENST00000557342 AADACL4Q5VUY2 407 aa10.61□□□□□ -0.71
SLIRP-209ENST00000557342 CYB5R2Q6BCY4 276 aa10.61□□□□□ -0.71
SLIRP-209ENST00000557342 KCTD18Q6PI47 426 aaPredicted RBP10.61□□□□□ -0.71
SLIRP-209ENST00000557342 Q71RC1 249 aaPredicted RBP10.61□□□□□ -0.71
SLIRP-209ENST00000557342 OR5AS1Q8N127 324 aa10.61□□□□□ -0.71
SLIRP-209ENST00000557342 PQLC1Q8N2U9 271 aa10.61□□□□□ -0.71
SLIRP-209ENST00000557342 HPS1Q92902 700 aa10.61□□□□□ -0.71
SLIRP-209ENST00000557342 MNTQ99583 582 aa10.61□□□□□ -0.71
SLIRP-209ENST00000557342 NIPAL2Q9H841 368 aa10.61□□□□□ -0.71
SLIRP-209ENST00000557342 TMEM100Q9NV29 134 aa10.61□□□□□ -0.71
SLIRP-209ENST00000557342 IL19Q9UHD0 177 aa10.61□□□□□ -0.71
SLIRP-209ENST00000557342 NOP16Q9Y3C1 178 aaKnown RBP10.61□□□□□ -0.71
SLIRP-209ENST00000557342 TMEM14AQ9Y6G1 99 aa10.61□□□□□ -0.71
SLIRP-209ENST00000557342 GGT3PA6NGU5 568 aa10.6□□□□□ -0.71
SLIRP-209ENST00000557342 CLDN25C9JDP6 229 aa10.6□□□□□ -0.71
SLIRP-209ENST00000557342 PHYHO14832 338 aa10.6□□□□□ -0.71
SLIRP-209ENST00000557342 TBX1O43435 398 aa10.6□□□□□ -0.71
SLIRP-209ENST00000557342 ALOX5APP20292 161 aa10.6□□□□□ -0.71
SLIRP-209ENST00000557342 POLR2IP36954 125 aaKnown RBP10.6□□□□□ -0.71
SLIRP-209ENST00000557342 KRTAP1-1Q07627 177 aa10.6□□□□□ -0.71
SLIRP-209ENST00000557342 GLYATL3Q5SZD4 288 aa10.6□□□□□ -0.71
SLIRP-209ENST00000557342 DEGS2Q6QHC5 323 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms