RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 GATA4P43694 442 aa13.29□□□□□ -0.28
TUBB3-213ENST00000557262 GSSP48637 474 aa13.29□□□□□ -0.28
TUBB3-213ENST00000557262 DBPQ10586 325 aaPredicted RBP13.29□□□□□ -0.28
TUBB3-213ENST00000557262 MALLQ13021 153 aa13.29□□□□□ -0.28
TUBB3-213ENST00000557262 MAB21L1Q13394 359 aa13.29□□□□□ -0.28
TUBB3-213ENST00000557262 GK2Q14410 553 aaPredicted RBP13.29□□□□□ -0.28
TUBB3-213ENST00000557262 ZNF404Q494X3 552 aa13.29□□□□□ -0.28
TUBB3-213ENST00000557262 CFAP77Q6ZQR2 320 aa13.29□□□□□ -0.28
TUBB3-213ENST00000557262 CELF2-AS1Q8N7Q2 184 aa13.29□□□□□ -0.28
TUBB3-213ENST00000557262 GNPDA2Q8TDQ7 276 aa13.29□□□□□ -0.28
TUBB3-213ENST00000557262 ERGIC1Q969X5 290 aa13.29□□□□□ -0.28
TUBB3-213ENST00000557262 SLCO4A1Q96BD0 722 aa13.29□□□□□ -0.28
TUBB3-213ENST00000557262 ZNF48Q96MX3 618 aaPredicted RBP13.29□□□□□ -0.28
TUBB3-213ENST00000557262 ATF6BQ99941 703 aa13.29□□□□□ -0.28
TUBB3-213ENST00000557262 MAGEL2Q9UJ55 1249 aa13.29□□□□□ -0.28
TUBB3-213ENST00000557262 TMCC3Q9ULS5 477 aa13.29□□□□□ -0.28
TUBB3-213ENST00000557262 IGHV2-70DA0A0C4DH43 119 aa13.28□□□□□ -0.28
TUBB3-213ENST00000557262 IRF2P14316 349 aa13.28□□□□□ -0.28
TUBB3-213ENST00000557262 GGT2P36268 569 aa13.28□□□□□ -0.28
TUBB3-213ENST00000557262 MTNR1AP48039 350 aa13.28□□□□□ -0.28
TUBB3-213ENST00000557262 TPTEP56180 551 aa13.28□□□□□ -0.28
TUBB3-213ENST00000557262 TRAP1Q12931 704 aaKnown RBP13.28□□□□□ -0.28
TUBB3-213ENST00000557262 TSPAN31Q12999 210 aa13.28□□□□□ -0.28
TUBB3-213ENST00000557262 FAM201AQ5SY85 155 aa13.28□□□□□ -0.28
TUBB3-213ENST00000557262 SHISA2Q6UWI4 295 aa13.28□□□□□ -0.28
TUBB3-213ENST00000557262 NLRC3Q7RTR2 1065 aa13.28□□□□□ -0.28
TUBB3-213ENST00000557262 PARP8Q8N3A8 854 aa13.28□□□□□ -0.28
TUBB3-213ENST00000557262 OR8B3Q8NGG8 313 aa13.28□□□□□ -0.28
TUBB3-213ENST00000557262 Q8TCH9 128 aa13.28□□□□□ -0.28
TUBB3-213ENST00000557262 SLC25A28Q96A46 364 aa13.28□□□□□ -0.28
TUBB3-213ENST00000557262 DACT3Q96B18 629 aaPredicted RBP13.28□□□□□ -0.28
TUBB3-213ENST00000557262 UPRTQ96BW1 309 aa13.28□□□□□ -0.28
TUBB3-213ENST00000557262 C1orf147Q96MC9 270 aaPredicted RBP13.28□□□□□ -0.28
TUBB3-213ENST00000557262 OR8B2Q96RD0 313 aa13.28□□□□□ -0.28
TUBB3-213ENST00000557262 PNRC2Q9NPJ4 139 aaKnown RBP13.28□□□□□ -0.28
TUBB3-213ENST00000557262 KCNG2Q9UJ96 466 aa13.28□□□□□ -0.28
TUBB3-213ENST00000557262 CLDN34H7C241 214 aa13.27□□□□□ -0.29
TUBB3-213ENST00000557262 FABP3P05413 133 aa13.27□□□□□ -0.29
TUBB3-213ENST00000557262 RNASE1P07998 156 aaKnown RBP13.27□□□□□ -0.29
TUBB3-213ENST00000557262 IGHV4-38-2P0DP08 117 aa13.27□□□□□ -0.29
TUBB3-213ENST00000557262 ZNF823P16415 610 aa13.27□□□□□ -0.29
TUBB3-213ENST00000557262 RRM2P31350 389 aa13.27□□□□□ -0.29
TUBB3-213ENST00000557262 MSX2P35548 267 aaPredicted RBP13.27□□□□□ -0.29
TUBB3-213ENST00000557262 CD200P41217 278 aa13.27□□□□□ -0.29
TUBB3-213ENST00000557262 PITPNBP48739 271 aa13.27□□□□□ -0.29
TUBB3-213ENST00000557262 PRSS12P56730 875 aa13.27□□□□□ -0.29
TUBB3-213ENST00000557262 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.27□□□□□ -0.29
TUBB3-213ENST00000557262 SLC35F1Q5T1Q4 408 aa13.27□□□□□ -0.29
TUBB3-213ENST00000557262 DCDC5Q6ZRR9 648 aa13.27□□□□□ -0.29
TUBB3-213ENST00000557262 C9orf139Q6ZV77 190 aa13.27□□□□□ -0.29
TUBB3-213ENST00000557262 PGAP1Q75T13 922 aa13.27□□□□□ -0.29
TUBB3-213ENST00000557262 SDR9C7Q8NEX9 313 aa13.27□□□□□ -0.29
TUBB3-213ENST00000557262 OR11L1Q8NGX0 322 aa13.27□□□□□ -0.29
TUBB3-213ENST00000557262 SPRYD4Q8WW59 207 aaPredicted RBP13.27□□□□□ -0.29
TUBB3-213ENST00000557262 NSMCE2Q96MF7 247 aa13.27□□□□□ -0.29
TUBB3-213ENST00000557262 CDRT15Q96T59 188 aa13.27□□□□□ -0.29
TUBB3-213ENST00000557262 SLC22A4Q9H015 551 aa13.27□□□□□ -0.29
TUBB3-213ENST00000557262 FN3KQ9H479 309 aa13.27□□□□□ -0.29
TUBB3-213ENST00000557262 IL1RAPQ9NPH3 570 aa13.27□□□□□ -0.29
TUBB3-213ENST00000557262 MRPL22Q9NWU5 206 aaKnown RBP13.27□□□□□ -0.29
TUBB3-213ENST00000557262 CD300AQ9UGN4 299 aa13.27□□□□□ -0.29
TUBB3-213ENST00000557262 IGHV3OR16-10A0A075B7F0 116 aa13.26□□□□□ -0.29
TUBB3-213ENST00000557262 TMPRSS2O15393 492 aa13.26□□□□□ -0.29
TUBB3-213ENST00000557262 SNX3O60493 162 aa13.26□□□□□ -0.29
TUBB3-213ENST00000557262 PLATP00750 562 aa13.26□□□□□ -0.29
TUBB3-213ENST00000557262 SLC9A3R2Q15599 337 aa13.26□□□□□ -0.29
TUBB3-213ENST00000557262 SAMD4BQ5PRF9 694 aaKnown RBP13.26□□□□□ -0.29
TUBB3-213ENST00000557262 LYPD2Q6UXB3 125 aa13.26□□□□□ -0.29
TUBB3-213ENST00000557262 ZNF620Q6ZNG0 422 aa13.26□□□□□ -0.29
TUBB3-213ENST00000557262 MRPL21Q7Z2W9 205 aaKnown RBP13.26□□□□□ -0.29
TUBB3-213ENST00000557262 PGAM4Q8N0Y7 254 aa13.26□□□□□ -0.29
TUBB3-213ENST00000557262 SPTSSAQ969W0 71 aa13.26□□□□□ -0.29
TUBB3-213ENST00000557262 MAP6Q96JE9 813 aa13.26□□□□□ -0.29
TUBB3-213ENST00000557262 DDOQ99489 341 aa13.26□□□□□ -0.29
TUBB3-213ENST00000557262 NUDT16L1Q9BRJ7 211 aaKnown RBP13.26□□□□□ -0.29
TUBB3-213ENST00000557262 NSRP1Q9H0G5 558 aaKnown RBP13.26□□□□□ -0.29
TUBB3-213ENST00000557262 CLN8Q9UBY8 286 aa13.26□□□□□ -0.29
TUBB3-213ENST00000557262 NOP16Q9Y3C1 178 aaKnown RBP13.26□□□□□ -0.29
TUBB3-213ENST00000557262 MGAM2Q2M2H8 2515 aa13.26□□□□□ -0.29
TUBB3-213ENST00000557262 CD300LBA8K4G0 201 aa13.25□□□□□ -0.29
TUBB3-213ENST00000557262 M0R135 149 aa13.25□□□□□ -0.29
TUBB3-213ENST00000557262 ARPC2O15144 300 aa13.25□□□□□ -0.29
TUBB3-213ENST00000557262 FAM20BO75063 409 aa13.25□□□□□ -0.29
TUBB3-213ENST00000557262 KRT36O76013 467 aa13.25□□□□□ -0.29
TUBB3-213ENST00000557262 CA6P23280 308 aa13.25□□□□□ -0.29
TUBB3-213ENST00000557262 HMGA2P52926 109 aa13.25□□□□□ -0.29
TUBB3-213ENST00000557262 RAD23AP54725 363 aa13.25□□□□□ -0.29
TUBB3-213ENST00000557262 OR8G1Q15617 311 aa13.25□□□□□ -0.29
TUBB3-213ENST00000557262 MPPED2Q15777 294 aa13.25□□□□□ -0.29
TUBB3-213ENST00000557262 CLEC12AQ5QGZ9 265 aa13.25□□□□□ -0.29
TUBB3-213ENST00000557262 WDR25Q64LD2 544 aaPredicted RBP13.25□□□□□ -0.29
TUBB3-213ENST00000557262 RPL13AP3Q6NVV1 102 aa13.25□□□□□ -0.29
TUBB3-213ENST00000557262 PGBD2Q6P3X8 592 aa13.25□□□□□ -0.29
TUBB3-213ENST00000557262 ZNF841Q6ZN19 808 aa13.25□□□□□ -0.29
TUBB3-213ENST00000557262 CPLX4Q7Z7G2 160 aa13.25□□□□□ -0.29
TUBB3-213ENST00000557262 ZDHHC21Q8IVQ6 265 aa13.25□□□□□ -0.29
TUBB3-213ENST00000557262 FITM2Q8N6M3 262 aa13.25□□□□□ -0.29
TUBB3-213ENST00000557262 ZNF799Q96GE5 643 aa13.25□□□□□ -0.29
TUBB3-213ENST00000557262 FAM107BQ9H098 131 aa13.25□□□□□ -0.29
TUBB3-213ENST00000557262 ZNF696Q9H7X3 374 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms