RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 MRPL13Q9BYD1 178 aaKnown RBP3.94□□□□□ -1.78
SRP54-212ENST00000556992 COMMD4Q9H0A8 199 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 SP140LQ9H930 580 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 ELOVL3Q9HB03 270 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 PROK2Q9HC23 129 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 TIGARQ9NQ88 270 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 ABCB10Q9NRK6 738 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 ACOXLQ9NUZ1 547 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 FAIMQ9NVQ4 179 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 SLCO1C1Q9NYB5 712 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 ABRACLQ9P1F3 81 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 B4GALT7Q9UBV7 327 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 MRM2Q9UI43 246 aaKnown RBP3.94□□□□□ -1.78
SRP54-212ENST00000556992 DAPK2Q9UIK4 370 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 KCNG2Q9UJ96 466 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 ZNF580Q9UK33 172 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 DKKL1Q9UK85 242 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 IKZF2Q9UKS7 526 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 COPS3Q9UNS2 423 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 IGSF10Q6WRI0 2623 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 ATG2BQ96BY7 2078 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 MYO10Q9HD67 2058 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 TENM4Q6N022 2769 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 GON4LQ3T8J9 2241 aa3.94□□□□□ -1.78
SRP54-212ENST00000556992 A0A1W2PNU3 283 aaPredicted RBP3.93□□□□□ -1.78
SRP54-212ENST00000556992 OR2M5A3KFT3 312 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 OR4C45A6NMZ5 311 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 FAM25AB3EWG3 89 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 FAM25CB3EWG5 89 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 FAM25GB3EWG6 89 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 B4DXG7 233 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 E9PLN8 166 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 H7C1C5 153 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 GPR171O14626 319 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 LRRTM2O43300 516 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 TRAPPC6AO75865 159 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 TPPPO94811 219 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 RPP14O95059 124 aaKnown RBP3.93□□□□□ -1.78
SRP54-212ENST00000556992 PTTG1O95997 202 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 OPN1LWP04000 364 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 SPARCP09486 303 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 OR8G3PP0DMU2 310 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 HLA-DOBP13765 273 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 CTLA4P16410 223 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 NPR2P20594 1047 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 CSRP1P21291 193 aaKnown RBP3.93□□□□□ -1.78
SRP54-212ENST00000556992 P2RY4P51582 365 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 RIDAP52758 137 aaKnown RBP3.93□□□□□ -1.78
SRP54-212ENST00000556992 BIDP55957 195 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 SOX8P57073 446 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 RPS18P62269 152 aaKnown RBP3.93□□□□□ -1.78
SRP54-212ENST00000556992 RPS11P62280 158 aaKnown RBP eCLIP3.93□□□□□ -1.78
SRP54-212ENST00000556992 LCN6P62502 163 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 IFITM3Q01628 133 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 EIF2B1Q14232 305 aaKnown RBP3.93□□□□□ -1.78
SRP54-212ENST00000556992 INSL4Q14641 139 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 TOMM20Q15388 145 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 INPP5JQ15735 1006 aaPredicted RBP3.93□□□□□ -1.78
SRP54-212ENST00000556992 HIST3H3Q16695 136 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 MEP1BQ16820 701 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 Q499Y3 187 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 PYDC2Q56P42 97 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 RAET1LQ5VY80 246 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 SFXN4Q6P4A7 337 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 LRRN1Q6UXK5 716 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 BAIAP2L2Q6UXY1 529 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 ZNF704Q6ZNC4 412 aaPredicted RBP3.93□□□□□ -1.78
SRP54-212ENST00000556992 ASB18Q6ZVZ8 466 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 GPAT4Q86UL3 456 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 SLC22A16Q86VW1 577 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 LRRC28Q86X40 367 aaPredicted RBP3.93□□□□□ -1.78
SRP54-212ENST00000556992 BEST3Q8N1M1 668 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 POC5Q8NA72 575 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 SLC26A10Q8NG04 563 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 OR5M1Q8NGP8 315 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 OR2AJ1Q8NGZ0 328 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 OR2G2Q8NGZ5 317 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 OR14L1PQ8NHC6 308 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 RPS4Y2Q8TD47 263 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 RNF128Q8TEB7 428 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 C15orf40Q8WUR7 153 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 ADAMTS14Q8WXS8 1223 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 ABTB1Q969K4 478 aaPredicted RBP3.93□□□□□ -1.78
SRP54-212ENST00000556992 DNAJA3Q96EY1 480 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 NPAS1Q99742 590 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 VKORC1Q9BQB6 163 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 ABHD6Q9BV23 337 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 PPIL3Q9H2H8 161 aaKnown RBP3.93□□□□□ -1.78
SRP54-212ENST00000556992 MIXL1Q9H2W2 232 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 TMEM185BQ9H7F4 350 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 PPP1R3EQ9H7J1 279 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 NIPAL2Q9H841 368 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 TCF7L1Q9HCS4 588 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 CYSLTR2Q9NS75 346 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 MRPL22Q9NWU5 206 aaKnown RBP3.93□□□□□ -1.78
SRP54-212ENST00000556992 LRFN1Q9P244 771 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 KLHL13Q9P2N7 655 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 B3GAT1Q9P2W7 334 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 CKLFQ9UBR5 152 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 BOKQ9UMX3 212 aaPredicted RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms