RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 SPICQ8N5J4 248 aa8.39□□□□□ -1.07
SCFD1-220ENST00000556486 NPEPL1Q8NDH3 523 aa8.39□□□□□ -1.07
SCFD1-220ENST00000556486 ABHD4Q8TB40 342 aa8.39□□□□□ -1.07
SCFD1-220ENST00000556486 ST7LQ8TDW4 575 aa8.39□□□□□ -1.07
SCFD1-220ENST00000556486 BPIFA2Q96DR5 249 aa8.39□□□□□ -1.07
SCFD1-220ENST00000556486 SAMD8Q96LT4 415 aa8.39□□□□□ -1.07
SCFD1-220ENST00000556486 RBM4BQ9BQ04 359 aaKnown RBP8.39□□□□□ -1.07
SCFD1-220ENST00000556486 ECSITQ9BQ95 431 aa8.39□□□□□ -1.07
SCFD1-220ENST00000556486 MS4A7Q9GZW8 240 aaPredicted RBP8.39□□□□□ -1.07
SCFD1-220ENST00000556486 MAN2C1Q9NTJ4 1040 aa8.39□□□□□ -1.07
SCFD1-220ENST00000556486 PURGQ9UJV8 347 aaKnown RBP8.39□□□□□ -1.07
SCFD1-220ENST00000556486 F5H0A9 414 aaPredicted RBP8.38□□□□□ -1.07
SCFD1-220ENST00000556486 HOXA3O43365 443 aaPredicted RBP8.38□□□□□ -1.07
SCFD1-220ENST00000556486 ZNF12P17014 697 aa8.38□□□□□ -1.07
SCFD1-220ENST00000556486 TNFRSF1AP19438 455 aa8.38□□□□□ -1.07
SCFD1-220ENST00000556486 GSTM3P21266 225 aa8.38□□□□□ -1.07
SCFD1-220ENST00000556486 KDELR2P33947 212 aa8.38□□□□□ -1.07
SCFD1-220ENST00000556486 GUCA1AP43080 201 aaPredicted RBP8.38□□□□□ -1.07
SCFD1-220ENST00000556486 OR1E2P47887 323 aa8.38□□□□□ -1.07
SCFD1-220ENST00000556486 SLC9A3P48764 834 aa8.38□□□□□ -1.07
SCFD1-220ENST00000556486 ARHGDIAP52565 204 aa8.38□□□□□ -1.07
SCFD1-220ENST00000556486 RAG2P55895 527 aa8.38□□□□□ -1.07
SCFD1-220ENST00000556486 SELENOWP63302 87 aa8.38□□□□□ -1.07
SCFD1-220ENST00000556486 SCRN3Q0VDG4 424 aa8.38□□□□□ -1.07
SCFD1-220ENST00000556486 ZNF154Q13106 437 aa8.38□□□□□ -1.07
SCFD1-220ENST00000556486 FBLN7Q53RD9 439 aa8.38□□□□□ -1.07
SCFD1-220ENST00000556486 CYBRD1Q53TN4 286 aa8.38□□□□□ -1.07
SCFD1-220ENST00000556486 ZNF774Q6NX45 483 aa8.38□□□□□ -1.07
SCFD1-220ENST00000556486 RNF113BQ8IZP6 322 aaKnown RBP8.38□□□□□ -1.07
SCFD1-220ENST00000556486 KLHL36Q8N4N3 616 aa8.38□□□□□ -1.07
SCFD1-220ENST00000556486 CLDN22Q8N7P3 220 aa8.38□□□□□ -1.07
SCFD1-220ENST00000556486 C10orf82Q8WW14 230 aa8.38□□□□□ -1.07
SCFD1-220ENST00000556486 GEMIN6Q8WXD5 167 aaKnown RBP8.38□□□□□ -1.07
SCFD1-220ENST00000556486 NSMAFQ92636 917 aa8.38□□□□□ -1.07
SCFD1-220ENST00000556486 COG8Q96MW5 612 aa8.38□□□□□ -1.07
SCFD1-220ENST00000556486 SIGLEC11Q96RL6 698 aa8.38□□□□□ -1.07
SCFD1-220ENST00000556486 DCLRE1CQ96SD1 692 aaKnown RBP8.38□□□□□ -1.07
SCFD1-220ENST00000556486 GPA33Q99795 319 aa8.38□□□□□ -1.07
SCFD1-220ENST00000556486 MARCH7Q9H992 704 aa8.38□□□□□ -1.07
SCFD1-220ENST00000556486 PATZ1Q9HBE1 687 aaKnown RBP8.38□□□□□ -1.07
SCFD1-220ENST00000556486 MSL2Q9HCI7 577 aa8.38□□□□□ -1.07
SCFD1-220ENST00000556486 POLE4Q9NR33 117 aa8.38□□□□□ -1.07
SCFD1-220ENST00000556486 TMEM106BQ9NUM4 274 aa8.38□□□□□ -1.07
SCFD1-220ENST00000556486 IL19Q9UHD0 177 aa8.38□□□□□ -1.07
SCFD1-220ENST00000556486 ATPIF1Q9UII2 106 aa8.38□□□□□ -1.07
SCFD1-220ENST00000556486 A0A0G2JND7 137 aa8.37□□□□□ -1.07
SCFD1-220ENST00000556486 A0A1B0GWJ7 208 aa8.37□□□□□ -1.07
SCFD1-220ENST00000556486 AQP12BA6NM10 295 aa8.37□□□□□ -1.07
SCFD1-220ENST00000556486 FAM220BPB1ANY3 271 aa8.37□□□□□ -1.07
SCFD1-220ENST00000556486 IFNL4K9M1U5 179 aa8.37□□□□□ -1.07
SCFD1-220ENST00000556486 SURF4O15260 269 aa8.37□□□□□ -1.07
SCFD1-220ENST00000556486 ABHD16AO95870 558 aa8.37□□□□□ -1.07
SCFD1-220ENST00000556486 CD1AP06126 327 aa8.37□□□□□ -1.07
SCFD1-220ENST00000556486 SBK2P0C263 348 aa8.37□□□□□ -1.07
SCFD1-220ENST00000556486 IFI30P13284 250 aa8.37□□□□□ -1.07
SCFD1-220ENST00000556486 IFNA8P32881 189 aa8.37□□□□□ -1.07
SCFD1-220ENST00000556486 BTG1P62324 171 aa8.37□□□□□ -1.07
SCFD1-220ENST00000556486 TNFAIP6P98066 277 aaPredicted RBP8.37□□□□□ -1.07
SCFD1-220ENST00000556486 PAX2Q02962 417 aa8.37□□□□□ -1.07
SCFD1-220ENST00000556486 PRKCDQ05655 676 aa8.37□□□□□ -1.07
SCFD1-220ENST00000556486 ASPHD2Q6ICH7 369 aa8.37□□□□□ -1.07
SCFD1-220ENST00000556486 C16orf87Q6PH81 154 aa8.37□□□□□ -1.07
SCFD1-220ENST00000556486 FIP1L1Q6UN15 594 aaKnown RBP8.37□□□□□ -1.07
SCFD1-220ENST00000556486 BRD3OSQ6XYD6 125 aa8.37□□□□□ -1.07
SCFD1-220ENST00000556486 C9orf139Q6ZV77 190 aa8.37□□□□□ -1.07
SCFD1-220ENST00000556486 TMPRSS11FQ6ZWK6 438 aa8.37□□□□□ -1.07
SCFD1-220ENST00000556486 FAM122BQ7Z309 247 aa8.37□□□□□ -1.07
SCFD1-220ENST00000556486 OAFQ86UD1 273 aa8.37□□□□□ -1.07
SCFD1-220ENST00000556486 DACT3Q96B18 629 aaPredicted RBP8.37□□□□□ -1.07
SCFD1-220ENST00000556486 HAVCR1Q96D42 359 aa8.37□□□□□ -1.07
SCFD1-220ENST00000556486 THOC1Q96FV9 657 aaKnown RBP8.37□□□□□ -1.07
SCFD1-220ENST00000556486 CITED1Q99966 193 aa8.37□□□□□ -1.07
SCFD1-220ENST00000556486 VIPAS39Q9H9C1 493 aa8.37□□□□□ -1.07
SCFD1-220ENST00000556486 INSIG2Q9Y5U4 225 aa8.37□□□□□ -1.07
SCFD1-220ENST00000556486 TEX13CA0A0J9YWL9 993 aa8.36□□□□□ -1.07
SCFD1-220ENST00000556486 OR6C6A6NF89 314 aa8.36□□□□□ -1.07
SCFD1-220ENST00000556486 G3V4G9 280 aa8.36□□□□□ -1.07
SCFD1-220ENST00000556486 MRASO14807 208 aa8.36□□□□□ -1.07
SCFD1-220ENST00000556486 FFAR1O14842 300 aa8.36□□□□□ -1.07
SCFD1-220ENST00000556486 TIMM8AO60220 97 aaPredicted RBP8.36□□□□□ -1.07
SCFD1-220ENST00000556486 SHOX2O60902 331 aaPredicted RBP8.36□□□□□ -1.07
SCFD1-220ENST00000556486 GASTP01350 101 aa8.36□□□□□ -1.07
SCFD1-220ENST00000556486 CD14P08571 375 aa8.36□□□□□ -1.07
SCFD1-220ENST00000556486 LSM6P62312 80 aaKnown RBP8.36□□□□□ -1.07
SCFD1-220ENST00000556486 PAX8Q06710 450 aa8.36□□□□□ -1.07
SCFD1-220ENST00000556486 KLF10Q13118 480 aa8.36□□□□□ -1.07
SCFD1-220ENST00000556486 TOP3AQ13472 1001 aaPredicted RBP8.36□□□□□ -1.07
SCFD1-220ENST00000556486 AQP6Q13520 282 aa8.36□□□□□ -1.07
SCFD1-220ENST00000556486 TRAM2Q15035 370 aa8.36□□□□□ -1.07
SCFD1-220ENST00000556486 ZMYND11Q15326 602 aa8.36□□□□□ -1.07
SCFD1-220ENST00000556486 MAPRE2Q15555 327 aa8.36□□□□□ -1.07
SCFD1-220ENST00000556486 OLFML2AQ68BL7 652 aa8.36□□□□□ -1.07
SCFD1-220ENST00000556486 Q6ZPA2 131 aa8.36□□□□□ -1.07
SCFD1-220ENST00000556486 Q6ZR03 302 aa8.36□□□□□ -1.07
SCFD1-220ENST00000556486 NRMQ8IXM6 262 aa8.36□□□□□ -1.07
SCFD1-220ENST00000556486 MUC20Q8N307 709 aaPredicted RBP8.36□□□□□ -1.07
SCFD1-220ENST00000556486 PARP8Q8N3A8 854 aa8.36□□□□□ -1.07
SCFD1-220ENST00000556486 PCYOX1LQ8NBM8 494 aa8.36□□□□□ -1.07
SCFD1-220ENST00000556486 OR2T12Q8NG77 320 aa8.36□□□□□ -1.07
SCFD1-220ENST00000556486 OR52E2Q8NGJ4 325 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms