RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 ATP12AP54707 1039 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 GFERP55789 205 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 OR1D5P58170 312 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 PPP1CAP62136 330 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 EEF1A1P68104 462 aaKnown RBP4.49□□□□□ -1.69
SRP54-211ENST00000556445 CDK5Q00535 292 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 EMX1Q04741 257 aaPredicted RBP4.49□□□□□ -1.69
SRP54-211ENST00000556445 PNRC1Q12796 327 aaPredicted RBP4.49□□□□□ -1.69
SRP54-211ENST00000556445 C1DQ13901 141 aaKnown RBP4.49□□□□□ -1.69
SRP54-211ENST00000556445 GPR176Q14439 515 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 EXOSC7Q15024 291 aaKnown RBP4.49□□□□□ -1.69
SRP54-211ENST00000556445 ANGPT1Q15389 498 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 USF2Q15853 346 aaPredicted RBP4.49□□□□□ -1.69
SRP54-211ENST00000556445 ZNF528Q3MIS6 628 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 AMZ1Q400G9 498 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 SYT14P1Q58G82 188 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 BEX5Q5H9J7 111 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 MRPL2Q5T653 305 aaKnown RBP4.49□□□□□ -1.69
SRP54-211ENST00000556445 LCN1P1Q5VSP4 162 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 UBE2UQ5VVX9 321 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 GPR107Q5VW38 600 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 RNLSQ5VYX0 342 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 XAF1Q6GPH4 301 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 SLC27A4Q6P1M0 643 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 ZNF836Q6ZNA1 936 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 MBOAT2Q6ZWT7 520 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 AHSA2Q719I0 299 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 Q7L0L9 218 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 ARHGAP22Q7Z5H3 698 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 FJX1Q86VR8 437 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 SFTPA2Q8IWL1 248 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 FAM58AQ8N1B3 248 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 MORN4Q8NDC4 146 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 OR4D9Q8NGE8 314 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 OR52L1Q8NGH7 329 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 OR4D11Q8NGI4 311 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 OR9Q1Q8NGQ5 310 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 OR14A16Q8NHC5 309 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 WDR36Q8NI36 951 aaKnown RBP4.49□□□□□ -1.69
SRP54-211ENST00000556445 M1APQ8TC57 530 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 C12orf43Q96C57 262 aaKnown RBP4.49□□□□□ -1.69
SRP54-211ENST00000556445 RAB39BQ96DA2 213 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 PLEKHA8Q96JA3 519 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 VSTM2LQ96N03 204 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 DUX5Q96PT3 197 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 RBM24Q9BX46 236 aaKnown RBP4.49□□□□□ -1.69
SRP54-211ENST00000556445 CDCA4Q9BXL8 241 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 KRTAP1-5Q9BYS1 174 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 NDEL1Q9GZM8 345 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 LHPPQ9H008 270 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 FAM234AQ9H0X4 552 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 GSN-AS1Q9NRJ2 163 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 FGF21Q9NSA1 209 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 STARD5Q9NSY2 213 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 FKBP14Q9NWM8 211 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 PIPOXQ9P0Z9 390 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 PLEKHB1Q9UF11 243 aaPredicted RBP4.49□□□□□ -1.69
SRP54-211ENST00000556445 PILRBQ9UKJ0 227 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 BAIAP2Q9UQB8 552 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 ERGIC3Q9Y282 383 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 CACNA1EQ15878 2313 aa4.49□□□□□ -1.69
SRP54-211ENST00000556445 SCN2AQ99250 2005 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 PI4KAP42356 2102 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 UNC13CQ8NB66 2214 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 TRBV5-7A0A0A0MS05 114 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 A0A1B0GUH1 482 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 MEX3AA1L020 520 aaKnown RBP4.48□□□□□ -1.69
SRP54-211ENST00000556445 FRG2CA6NGY1 282 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 NPIPA3F8WFD2 350 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 CHEK1O14757 476 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 CHP2O43745 196 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 TIMM8AO60220 97 aaPredicted RBP4.48□□□□□ -1.69
SRP54-211ENST00000556445 HCN1O60741 890 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 NEURL1O76050 574 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 EPPINO95925 133 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 IGF2P01344 180 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 CRYABP02511 175 aaKnown RBP4.48□□□□□ -1.69
SRP54-211ENST00000556445 MT-ND2P03891 347 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 CT62P0C5K7 136 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 PSMB9P28065 219 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 EPHA2P29317 976 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 CD80P33681 288 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 PCYT1AP49585 367 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 EMDP50402 254 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 ZNF136P52737 540 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 COPZ1P61923 177 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 TUBA1BP68363 451 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 CRYZQ08257 329 aaKnown RBP4.48□□□□□ -1.69
SRP54-211ENST00000556445 ST3GAL4Q11206 333 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 GINS1Q14691 196 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 OR1Q1Q15612 314 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 BCL2A1Q16548 175 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 ASPHD1Q5U4P2 390 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 LAIR2Q6ISS4 152 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 RHBDD2Q6NTF9 364 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 RNASEKQ6P5S7 137 aaKnown RBP4.48□□□□□ -1.69
SRP54-211ENST00000556445 GDPGP1Q6ZNW5 385 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 TUBA1AQ71U36 451 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 ZNF367Q7RTV3 350 aa4.48□□□□□ -1.69
SRP54-211ENST00000556445 P2RY8Q86VZ1 359 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms