RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 CRHBPP24387 322 aa12.09□□□□□ -0.47
VIPAS39-208ENST00000556412 GCH1P30793 250 aa12.09□□□□□ -0.47
VIPAS39-208ENST00000556412 PSMB10P40306 273 aa12.09□□□□□ -0.47
VIPAS39-208ENST00000556412 KRTAP10-9P60411 292 aa12.09□□□□□ -0.47
VIPAS39-208ENST00000556412 MFGE8Q08431 387 aaPredicted RBP12.09□□□□□ -0.47
VIPAS39-208ENST00000556412 MALLQ13021 153 aa12.09□□□□□ -0.47
VIPAS39-208ENST00000556412 CDONQ4KMG0 1287 aa12.09□□□□□ -0.47
VIPAS39-208ENST00000556412 RBM48Q5RL73 367 aaKnown RBP12.09□□□□□ -0.47
VIPAS39-208ENST00000556412 OR5L1Q8NGL2 311 aa12.09□□□□□ -0.47
VIPAS39-208ENST00000556412 TMEM171Q8WVE6 324 aa12.09□□□□□ -0.47
VIPAS39-208ENST00000556412 NRGNQ92686 78 aa12.09□□□□□ -0.47
VIPAS39-208ENST00000556412 MYCBPQ99417 103 aaPredicted RBP12.09□□□□□ -0.47
VIPAS39-208ENST00000556412 SYT3Q9BQG1 590 aa12.09□□□□□ -0.47
VIPAS39-208ENST00000556412 C1QTNF5Q9BXJ0 243 aa12.09□□□□□ -0.47
VIPAS39-208ENST00000556412 ISG20L2Q9H9L3 353 aaKnown RBP12.09□□□□□ -0.47
VIPAS39-208ENST00000556412 CLEC2DQ9UHP7 191 aa12.09□□□□□ -0.47
VIPAS39-208ENST00000556412 LOC110117498-PIK3R3F6TDL0 507 aa12.08□□□□□ -0.48
VIPAS39-208ENST00000556412 ATE1O95260 518 aa12.08□□□□□ -0.48
VIPAS39-208ENST00000556412 CDK1P06493 297 aa12.08□□□□□ -0.48
VIPAS39-208ENST00000556412 LIMS3P0CW19 117 aa12.08□□□□□ -0.48
VIPAS39-208ENST00000556412 LIMS4P0CW20 117 aa12.08□□□□□ -0.48
VIPAS39-208ENST00000556412 APOBEC3AP31941 199 aaPredicted RBP12.08□□□□□ -0.48
VIPAS39-208ENST00000556412 SERPINF1P36955 418 aa12.08□□□□□ -0.48
VIPAS39-208ENST00000556412 PRSS12P56730 875 aa12.08□□□□□ -0.48
VIPAS39-208ENST00000556412 HLXQ14774 488 aaPredicted RBP12.08□□□□□ -0.48
VIPAS39-208ENST00000556412 ADIPOQQ15848 244 aa12.08□□□□□ -0.48
VIPAS39-208ENST00000556412 ZNF684Q5T5D7 378 aa12.08□□□□□ -0.48
VIPAS39-208ENST00000556412 OR2G6Q5TZ20 316 aa12.08□□□□□ -0.48
VIPAS39-208ENST00000556412 FBXL14Q8N1E6 418 aa12.08□□□□□ -0.48
VIPAS39-208ENST00000556412 MUC15Q8N387 334 aa12.08□□□□□ -0.48
VIPAS39-208ENST00000556412 KLHL36Q8N4N3 616 aa12.08□□□□□ -0.48
VIPAS39-208ENST00000556412 OR2AE1Q8NHA4 323 aa12.08□□□□□ -0.48
VIPAS39-208ENST00000556412 COG8Q96MW5 612 aa12.08□□□□□ -0.48
VIPAS39-208ENST00000556412 ZNF442Q9H7R0 627 aa12.08□□□□□ -0.48
VIPAS39-208ENST00000556412 PLEKHF2Q9H8W4 249 aa12.08□□□□□ -0.48
VIPAS39-208ENST00000556412 SP140LQ9H930 580 aa12.08□□□□□ -0.48
VIPAS39-208ENST00000556412 FAIMQ9NVQ4 179 aa12.08□□□□□ -0.48
VIPAS39-208ENST00000556412 FKBP14Q9NWM8 211 aa12.08□□□□□ -0.48
VIPAS39-208ENST00000556412 LRRC42Q9Y546 428 aa12.08□□□□□ -0.48
VIPAS39-208ENST00000556412 R4GMQ9 66 aa12.08□□□□□ -0.48
VIPAS39-208ENST00000556412 A0A1W2PPW3 197 aa12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 MYL12BO14950 172 aa12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 RGS10O43665 173 aa12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 ICMTO60725 284 aa12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 TTKP33981 857 aa12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 MPV17P39210 176 aa12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 SLC35A2P78381 396 aa12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 TIGD6Q17RP2 521 aa12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 MSMPQ1L6U9 139 aa12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 ZNF718Q3SXZ3 478 aa12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 GLYATL3Q5SZD4 288 aa12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 BCL2L15Q5TBC7 163 aa12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 ZNF544Q6NX49 715 aa12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 TMPRSS11AQ6ZMR5 421 aa12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 COLCA1Q6ZS62 124 aa12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 MRPL21Q7Z2W9 205 aaKnown RBP12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 KCTD20Q7Z5Y7 419 aa12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 LRP11Q86VZ4 500 aa12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 COMMD2Q86X83 199 aa12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 SYNPRQ8TBG9 265 aa12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 KLF14Q8TD94 323 aaPredicted RBP12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 SPRYD4Q8WW59 207 aaPredicted RBP12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 JAM3Q9BX67 310 aa12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 OR10A2Q9H208 303 aa12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 PLK3Q9H4B4 646 aa12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 FAM206AQ9NX38 181 aa12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 LAMP3Q9UQV4 416 aa12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 J3QW42 95 aa12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 CLPTM1O96005 669 aa12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 PNPP00491 289 aa12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 MT-ND5P03915 603 aa12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 DCTDP32321 178 aa12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 SELENOVP59797 346 aa12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 ODF4Q2M2E3 257 aa12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 ALKBH6Q3KRA9 238 aa12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 PRSS45Q7RTY3 260 aa12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 SYS1Q8N2H4 156 aa12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 ZNF611Q8N823 705 aa12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 OR52H1Q8NGJ2 320 aa12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 GATAD2BQ8WXI9 593 aa12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 RORBQ92753 470 aa12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 PPP1R14AQ96A00 147 aa12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 MRPL24Q96A35 216 aaKnown RBP12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 CMBLQ96DG6 245 aa12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 MARS2Q96GW9 593 aaKnown RBP12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 SIGLEC11Q96RL6 698 aa12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 ZNF649Q9BS31 505 aa12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 MRPL37Q9BZE1 423 aaKnown RBP12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 PBOV1Q9GZY1 135 aa12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 LIME1Q9H400 295 aa12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 OR52A1Q9UKL2 312 aa12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 ERGIC3Q9Y282 383 aa12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 CAB39Q9Y376 341 aaPredicted RBP12.07□□□□□ -0.48
VIPAS39-208ENST00000556412 MT-ND2P03891 347 aa12.06□□□□□ -0.48
VIPAS39-208ENST00000556412 SOD3P08294 240 aa12.06□□□□□ -0.48
VIPAS39-208ENST00000556412 MMP16P51512 607 aa12.06□□□□□ -0.48
VIPAS39-208ENST00000556412 KLF3P57682 345 aaPredicted RBP12.06□□□□□ -0.48
VIPAS39-208ENST00000556412 AGAP6Q5VW22 663 aa12.06□□□□□ -0.48
VIPAS39-208ENST00000556412 PGAP1Q75T13 922 aa12.06□□□□□ -0.48
VIPAS39-208ENST00000556412 C1orf174Q8IYL3 243 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms