RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 OR2G6Q5TZ20 316 aa10.77□□□□□ -0.69
SHMT2-221ENST00000555773 SLC22A25Q6T423 547 aa10.77□□□□□ -0.69
SHMT2-221ENST00000555773 NAA40Q86UY6 237 aa10.77□□□□□ -0.69
SHMT2-221ENST00000555773 PIAS4Q8N2W9 510 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-221ENST00000555773 PAQR4Q8N4S7 273 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-221ENST00000555773 NUP37Q8NFH4 326 aa10.77□□□□□ -0.69
SHMT2-221ENST00000555773 TSPAN14Q8NG11 270 aa10.77□□□□□ -0.69
SHMT2-221ENST00000555773 GATAD2BQ8WXI9 593 aa10.77□□□□□ -0.69
SHMT2-221ENST00000555773 RORBQ92753 470 aa10.77□□□□□ -0.69
SHMT2-221ENST00000555773 ITFG2Q969R8 447 aa10.77□□□□□ -0.69
SHMT2-221ENST00000555773 PIK3IP1Q96FE7 263 aa10.77□□□□□ -0.69
SHMT2-221ENST00000555773 ACOXLQ9NUZ1 547 aa10.77□□□□□ -0.69
SHMT2-221ENST00000555773 FAM206AQ9NX38 181 aa10.77□□□□□ -0.69
SHMT2-221ENST00000555773 RNF115Q9Y4L5 304 aa10.77□□□□□ -0.69
SHMT2-221ENST00000555773 HCFC1P51610 2035 aa10.77□□□□□ -0.69
SHMT2-221ENST00000555773 FAM221AA4D161 298 aa10.76□□□□□ -0.69
SHMT2-221ENST00000555773 MAGEA13PA6NCF6 341 aa10.76□□□□□ -0.69
SHMT2-221ENST00000555773 A6NNC1 897 aa10.76□□□□□ -0.69
SHMT2-221ENST00000555773 LOC110117498-PIK3R3F6TDL0 507 aa10.76□□□□□ -0.69
SHMT2-221ENST00000555773 SIAH2O43255 324 aa10.76□□□□□ -0.69
SHMT2-221ENST00000555773 PNPP00491 289 aa10.76□□□□□ -0.69
SHMT2-221ENST00000555773 LOXP28300 417 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-221ENST00000555773 GLRXP35754 106 aa10.76□□□□□ -0.69
SHMT2-221ENST00000555773 RPS23P62266 143 aaKnown RBP10.76□□□□□ -0.69
SHMT2-221ENST00000555773 NKX6-1P78426 367 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-221ENST00000555773 MALLQ13021 153 aa10.76□□□□□ -0.69
SHMT2-221ENST00000555773 ADAM5Q6NVV9 412 aa10.76□□□□□ -0.69
SHMT2-221ENST00000555773 RPL22L1Q6P5R6 122 aaKnown RBP10.76□□□□□ -0.69
SHMT2-221ENST00000555773 OR2G2Q8NGZ5 317 aa10.76□□□□□ -0.69
SHMT2-221ENST00000555773 FCGR1BQ92637 280 aa10.76□□□□□ -0.69
SHMT2-221ENST00000555773 RNF166Q96A37 237 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-221ENST00000555773 PGAM5Q96HS1 289 aa10.76□□□□□ -0.69
SHMT2-221ENST00000555773 PBOV1Q9GZY1 135 aa10.76□□□□□ -0.69
SHMT2-221ENST00000555773 OR10A2Q9H208 303 aa10.76□□□□□ -0.69
SHMT2-221ENST00000555773 RGCCQ9H4X1 137 aa10.76□□□□□ -0.69
SHMT2-221ENST00000555773 ISYNA1Q9NPH2 558 aa10.76□□□□□ -0.69
SHMT2-221ENST00000555773 ACOT13Q9NPJ3 140 aa10.76□□□□□ -0.69
SHMT2-221ENST00000555773 TRIM36Q9NQ86 728 aa10.76□□□□□ -0.69
SHMT2-221ENST00000555773 NUFIP1Q9UHK0 495 aaKnown RBP10.76□□□□□ -0.69
SHMT2-221ENST00000555773 ZNF391Q9UJN7 358 aa10.76□□□□□ -0.69
SHMT2-221ENST00000555773 OR52A1Q9UKL2 312 aa10.76□□□□□ -0.69
SHMT2-221ENST00000555773 LSM2Q9Y333 95 aaKnown RBP10.76□□□□□ -0.69
SHMT2-221ENST00000555773 STARD10Q9Y365 291 aa10.76□□□□□ -0.69
SHMT2-221ENST00000555773 CADP27708 2225 aa10.75□□□□□ -0.69
SHMT2-221ENST00000555773 A0A0U1RQV5 110 aa10.75□□□□□ -0.69
SHMT2-221ENST00000555773 SHISA9B4DS77 424 aa10.75□□□□□ -0.69
SHMT2-221ENST00000555773 ATP6V1G2-DDX39BF2Z307 99 aa10.75□□□□□ -0.69
SHMT2-221ENST00000555773 H3BSA7 217 aa10.75□□□□□ -0.69
SHMT2-221ENST00000555773 OGG1O15527 345 aa10.75□□□□□ -0.69
SHMT2-221ENST00000555773 XRCC2O43543 280 aa10.75□□□□□ -0.69
SHMT2-221ENST00000555773 SMPD2O60906 423 aa10.75□□□□□ -0.69
SHMT2-221ENST00000555773 NGFP01138 241 aa10.75□□□□□ -0.69
SHMT2-221ENST00000555773 CD1AP06126 327 aa10.75□□□□□ -0.69
SHMT2-221ENST00000555773 PCMT1P22061 227 aa10.75□□□□□ -0.69
SHMT2-221ENST00000555773 CFL1P23528 166 aaKnown RBP10.75□□□□□ -0.69
SHMT2-221ENST00000555773 PSMB10P40306 273 aa10.75□□□□□ -0.69
SHMT2-221ENST00000555773 MAP2K4P45985 399 aa10.75□□□□□ -0.69
SHMT2-221ENST00000555773 PPP1CBP62140 327 aa10.75□□□□□ -0.69
SHMT2-221ENST00000555773 GPR50Q13585 617 aa10.75□□□□□ -0.69
SHMT2-221ENST00000555773 ALKBH1Q13686 389 aaKnown RBP10.75□□□□□ -0.69
SHMT2-221ENST00000555773 MED22Q15528 200 aa10.75□□□□□ -0.69
SHMT2-221ENST00000555773 FAM57BQ71RH2 274 aa10.75□□□□□ -0.69
SHMT2-221ENST00000555773 ZNF367Q7RTV3 350 aa10.75□□□□□ -0.69
SHMT2-221ENST00000555773 CATSPERDQ86XM0 798 aa10.75□□□□□ -0.69
SHMT2-221ENST00000555773 KLBQ86Z14 1044 aa10.75□□□□□ -0.69
SHMT2-221ENST00000555773 ELMOD2Q8IZ81 293 aa10.75□□□□□ -0.69
SHMT2-221ENST00000555773 ZNF101Q8IZC7 436 aa10.75□□□□□ -0.69
SHMT2-221ENST00000555773 ABHD4Q8TB40 342 aa10.75□□□□□ -0.69
SHMT2-221ENST00000555773 OPA3Q9H6K4 179 aa10.75□□□□□ -0.69
SHMT2-221ENST00000555773 ZNF442Q9H7R0 627 aa10.75□□□□□ -0.69
SHMT2-221ENST00000555773 VCX3AQ9NNX9 186 aa10.75□□□□□ -0.69
SHMT2-221ENST00000555773 BRD7Q9NPI1 651 aa10.75□□□□□ -0.69
SHMT2-221ENST00000555773 G6PC2Q9NQR9 355 aa10.75□□□□□ -0.69
SHMT2-221ENST00000555773 PLEKHB1Q9UF11 243 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-221ENST00000555773 POU2F3Q9UKI9 436 aa10.75□□□□□ -0.69
SHMT2-221ENST00000555773 ATP23Q9Y6H3 246 aa10.75□□□□□ -0.69
SHMT2-221ENST00000555773 ABCA4P78363 2273 aa10.74□□□□□ -0.69
SHMT2-221ENST00000555773 ICE1Q9Y2F5 2266 aa10.74□□□□□ -0.69
SHMT2-221ENST00000555773 TRIM64CA6NLI5 447 aa10.74□□□□□ -0.69
SHMT2-221ENST00000555773 E9PI62 339 aa10.74□□□□□ -0.69
SHMT2-221ENST00000555773 ATE1O95260 518 aa10.74□□□□□ -0.69
SHMT2-221ENST00000555773 LCKP06239 509 aa10.74□□□□□ -0.69
SHMT2-221ENST00000555773 FAM157BP0CG42 384 aa10.74□□□□□ -0.69
SHMT2-221ENST00000555773 SLC2A1P11166 492 aa10.74□□□□□ -0.69
SHMT2-221ENST00000555773 SNTB2Q13425 540 aaKnown RBP10.74□□□□□ -0.69
SHMT2-221ENST00000555773 ZNF718Q3SXZ3 478 aa10.74□□□□□ -0.69
SHMT2-221ENST00000555773 BCL2L15Q5TBC7 163 aa10.74□□□□□ -0.69
SHMT2-221ENST00000555773 TMEM244Q5VVB8 128 aa10.74□□□□□ -0.69
SHMT2-221ENST00000555773 UBE2UQ5VVX9 321 aa10.74□□□□□ -0.69
SHMT2-221ENST00000555773 FBXW12Q6X9E4 464 aa10.74□□□□□ -0.69
SHMT2-221ENST00000555773 ZNF704Q6ZNC4 412 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-221ENST00000555773 CCDC54Q8NEL0 328 aa10.74□□□□□ -0.69
SHMT2-221ENST00000555773 OR1J1Q8NGS3 322 aa10.74□□□□□ -0.69
SHMT2-221ENST00000555773 AKAP1Q92667 903 aaKnown RBP eCLIP10.74□□□□□ -0.69
SHMT2-221ENST00000555773 SPSB4Q96A44 273 aa10.74□□□□□ -0.69
SHMT2-221ENST00000555773 SGK3Q96BR1 496 aa10.74□□□□□ -0.69
SHMT2-221ENST00000555773 OR5M11Q96RB7 305 aa10.74□□□□□ -0.69
SHMT2-221ENST00000555773 FRRS1LQ9P0K9 344 aa10.74□□□□□ -0.69
SHMT2-221ENST00000555773 GTF2A1LQ9UNN4 478 aa10.74□□□□□ -0.69
SHMT2-221ENST00000555773 N6AMT1Q9Y5N5 214 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms