RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 OPN4Q9UHM6 478 aa12.98□□□□□ -0.33
SNX6-205ENST00000555648 LRCH1Q9Y2L9 728 aa12.98□□□□□ -0.33
SNX6-205ENST00000555648 LYVE1Q9Y5Y7 322 aa12.98□□□□□ -0.33
SNX6-205ENST00000555648 B2RBV5 119 aa12.97□□□□□ -0.33
SNX6-205ENST00000555648 H0YL77 283 aa12.97□□□□□ -0.33
SNX6-205ENST00000555648 M0R135 149 aa12.97□□□□□ -0.33
SNX6-205ENST00000555648 ZNF205O95201 554 aa12.97□□□□□ -0.33
SNX6-205ENST00000555648 HLA-DPB1P04440 258 aa12.97□□□□□ -0.33
SNX6-205ENST00000555648 GNB2P62879 340 aa12.97□□□□□ -0.33
SNX6-205ENST00000555648 GK2Q14410 553 aaPredicted RBP12.97□□□□□ -0.33
SNX6-205ENST00000555648 DHFR2Q86XF0 187 aa12.97□□□□□ -0.33
SNX6-205ENST00000555648 ARHGAP24Q8N264 748 aa12.97□□□□□ -0.33
SNX6-205ENST00000555648 ZNF799Q96GE5 643 aa12.97□□□□□ -0.33
SNX6-205ENST00000555648 COPS4Q9BT78 406 aa12.97□□□□□ -0.33
SNX6-205ENST00000555648 SSBP3Q9BWW4 388 aaPredicted RBP12.97□□□□□ -0.33
SNX6-205ENST00000555648 SLC22A4Q9H015 551 aa12.97□□□□□ -0.33
SNX6-205ENST00000555648 MUC13Q9H3R2 512 aa12.97□□□□□ -0.33
SNX6-205ENST00000555648 REEP1Q9H902 201 aa12.97□□□□□ -0.33
SNX6-205ENST00000555648 NUP50Q9UKX7 468 aa12.97□□□□□ -0.33
SNX6-205ENST00000555648 CUBNO60494 3623 aa12.96□□□□□ -0.33
SNX6-205ENST00000555648 GGT3PA6NGU5 568 aa12.96□□□□□ -0.33
SNX6-205ENST00000555648 TVP23AA6NH52 213 aa12.96□□□□□ -0.33
SNX6-205ENST00000555648 IFNGP01579 166 aa12.96□□□□□ -0.33
SNX6-205ENST00000555648 SPARCP09486 303 aa12.96□□□□□ -0.33
SNX6-205ENST00000555648 ZNF12P17014 697 aa12.96□□□□□ -0.33
SNX6-205ENST00000555648 FMO3P31513 532 aa12.96□□□□□ -0.33
SNX6-205ENST00000555648 RBMXP38159 391 aaKnown RBP12.96□□□□□ -0.33
SNX6-205ENST00000555648 HMGA2P52926 109 aa12.96□□□□□ -0.33
SNX6-205ENST00000555648 SEC61A1P61619 476 aaKnown RBP12.96□□□□□ -0.33
SNX6-205ENST00000555648 DBPQ10586 325 aaPredicted RBP12.96□□□□□ -0.33
SNX6-205ENST00000555648 OR8G1Q15617 311 aa12.96□□□□□ -0.33
SNX6-205ENST00000555648 ZNF181Q2M3W8 571 aa12.96□□□□□ -0.33
SNX6-205ENST00000555648 FAM98BQ52LJ0 330 aaKnown RBP12.96□□□□□ -0.33
SNX6-205ENST00000555648 COLCA1Q6ZS62 124 aa12.96□□□□□ -0.33
SNX6-205ENST00000555648 RASSF6Q6ZTQ3 369 aa12.96□□□□□ -0.33
SNX6-205ENST00000555648 AQP11Q8NBQ7 271 aa12.96□□□□□ -0.33
SNX6-205ENST00000555648 DEFB108BQ8NET1 73 aa12.96□□□□□ -0.33
SNX6-205ENST00000555648 OR8B3Q8NGG8 313 aa12.96□□□□□ -0.33
SNX6-205ENST00000555648 ERGIC1Q969X5 290 aa12.96□□□□□ -0.33
SNX6-205ENST00000555648 NSL1Q96IY1 281 aa12.96□□□□□ -0.33
SNX6-205ENST00000555648 LRGUKQ96M69 825 aa12.96□□□□□ -0.33
SNX6-205ENST00000555648 OR8B2Q96RD0 313 aa12.96□□□□□ -0.33
SNX6-205ENST00000555648 TSSK6Q9BXA6 273 aa12.96□□□□□ -0.33
SNX6-205ENST00000555648 MAGIXQ9H6Y5 334 aa12.96□□□□□ -0.33
SNX6-205ENST00000555648 CENPMQ9NSP4 180 aa12.96□□□□□ -0.33
SNX6-205ENST00000555648 MRPL22Q9NWU5 206 aaKnown RBP12.96□□□□□ -0.33
SNX6-205ENST00000555648 IL20Q9NYY1 176 aa12.96□□□□□ -0.33
SNX6-205ENST00000555648 BAIAP2Q9UQB8 552 aa12.96□□□□□ -0.33
SNX6-205ENST00000555648 POLR3KQ9Y2Y1 108 aaPredicted RBP12.96□□□□□ -0.33
SNX6-205ENST00000555648 SAMHD1Q9Y3Z3 626 aaKnown RBP12.96□□□□□ -0.33
SNX6-205ENST00000555648 PPIAL4AQ9Y536 164 aa12.96□□□□□ -0.33
SNX6-205ENST00000555648 N6AMT1Q9Y5N5 214 aa12.96□□□□□ -0.33
SNX6-205ENST00000555648 INSIG2Q9Y5U4 225 aa12.96□□□□□ -0.33
SNX6-205ENST00000555648 A8MXK9 166 aa12.95□□□□□ -0.34
SNX6-205ENST00000555648 F5H0A9 414 aaPredicted RBP12.95□□□□□ -0.34
SNX6-205ENST00000555648 TRAPPC2LH3BP13 241 aa12.95□□□□□ -0.34
SNX6-205ENST00000555648 BHLHE40O14503 412 aa12.95□□□□□ -0.34
SNX6-205ENST00000555648 MLNRO43193 412 aa12.95□□□□□ -0.34
SNX6-205ENST00000555648 GASTP01350 101 aa12.95□□□□□ -0.34
SNX6-205ENST00000555648 WNT2P09544 360 aa12.95□□□□□ -0.34
SNX6-205ENST00000555648 ATP6V1B2P21281 511 aa12.95□□□□□ -0.34
SNX6-205ENST00000555648 PRSS12P56730 875 aa12.95□□□□□ -0.34
SNX6-205ENST00000555648 RSPO1Q2MKA7 263 aaPredicted RBP12.95□□□□□ -0.34
SNX6-205ENST00000555648 KRTAP27-1Q3LI81 207 aa12.95□□□□□ -0.34
SNX6-205ENST00000555648 DRAM2Q6UX65 266 aa12.95□□□□□ -0.34
SNX6-205ENST00000555648 LRRN1Q6UXK5 716 aa12.95□□□□□ -0.34
SNX6-205ENST00000555648 NAA40Q86UY6 237 aa12.95□□□□□ -0.34
SNX6-205ENST00000555648 KLBQ86Z14 1044 aa12.95□□□□□ -0.34
SNX6-205ENST00000555648 CELF2-AS1Q8N7Q2 184 aa12.95□□□□□ -0.34
SNX6-205ENST00000555648 SLC37A3Q8NCC5 494 aa12.95□□□□□ -0.34
SNX6-205ENST00000555648 OR51L1Q8NGJ5 315 aa12.95□□□□□ -0.34
SNX6-205ENST00000555648 NEIL1Q96FI4 390 aaPredicted RBP12.95□□□□□ -0.34
SNX6-205ENST00000555648 MAP6Q96JE9 813 aa12.95□□□□□ -0.34
SNX6-205ENST00000555648 BTBD10Q9BSF8 475 aa12.95□□□□□ -0.34
SNX6-205ENST00000555648 MS4A7Q9GZW8 240 aaPredicted RBP12.95□□□□□ -0.34
SNX6-205ENST00000555648 FN3KRPQ9HA64 309 aa12.95□□□□□ -0.34
SNX6-205ENST00000555648 TMEM165Q9HC07 324 aa12.95□□□□□ -0.34
SNX6-205ENST00000555648 PNRC2Q9NPJ4 139 aaKnown RBP12.95□□□□□ -0.34
SNX6-205ENST00000555648 U3KQV3 271 aa12.95□□□□□ -0.34
SNX6-205ENST00000555648 RIIAD1A6NNX1 92 aa12.94□□□□□ -0.34
SNX6-205ENST00000555648 CD300LBA8K4G0 201 aa12.94□□□□□ -0.34
SNX6-205ENST00000555648 CFPP27918 469 aa12.94□□□□□ -0.34
SNX6-205ENST00000555648 RPS27P42677 84 aaKnown RBP12.94□□□□□ -0.34
SNX6-205ENST00000555648 BLVRAP53004 296 aa12.94□□□□□ -0.34
SNX6-205ENST00000555648 MZT1Q08AG7 82 aa12.94□□□□□ -0.34
SNX6-205ENST00000555648 KCNJ8Q15842 424 aa12.94□□□□□ -0.34
SNX6-205ENST00000555648 OR2T5Q6IEZ7 315 aa12.94□□□□□ -0.34
SNX6-205ENST00000555648 DCXRQ7Z4W1 244 aa12.94□□□□□ -0.34
SNX6-205ENST00000555648 OR2T33Q8NG76 320 aa12.94□□□□□ -0.34
SNX6-205ENST00000555648 OR9Q1Q8NGQ5 310 aa12.94□□□□□ -0.34
SNX6-205ENST00000555648 OR6K6Q8NGW6 343 aa12.94□□□□□ -0.34
SNX6-205ENST00000555648 OR2T29Q8NH02 315 aa12.94□□□□□ -0.34
SNX6-205ENST00000555648 ZMYND19Q96E35 227 aaPredicted RBP12.94□□□□□ -0.34
SNX6-205ENST00000555648 TMEM246Q9BRR3 403 aa12.94□□□□□ -0.34
SNX6-205ENST00000555648 UFSP2Q9NUQ7 469 aa12.94□□□□□ -0.34
SNX6-205ENST00000555648 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.93□□□□□ -0.34
SNX6-205ENST00000555648 TMEM89A2RUT3 159 aa12.93□□□□□ -0.34
SNX6-205ENST00000555648 ZNF593O00488 134 aaPredicted RBP12.93□□□□□ -0.34
SNX6-205ENST00000555648 SOX14O95416 240 aa12.93□□□□□ -0.34
SNX6-205ENST00000555648 FSHBP01225 129 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms