RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 TRDMT1O14717 391 aaKnown RBP3.42□□□□□ -1.86
VRK1-205ENST00000555402 SIVA1O15304 175 aa3.42□□□□□ -1.86
VRK1-205ENST00000555402 HPRT1P00492 218 aa3.42□□□□□ -1.86
VRK1-205ENST00000555402 TLX1NBP0CAT3 122 aa3.42□□□□□ -1.86
VRK1-205ENST00000555402 PGAM1P18669 254 aa3.42□□□□□ -1.86
VRK1-205ENST00000555402 ATF6P18850 670 aa3.42□□□□□ -1.86
VRK1-205ENST00000555402 CLDN18P56856 261 aa3.42□□□□□ -1.86
VRK1-205ENST00000555402 DGCR6Q14129 220 aa3.42□□□□□ -1.86
VRK1-205ENST00000555402 SNRNP35Q16560 246 aaKnown RBP3.42□□□□□ -1.86
VRK1-205ENST00000555402 FAM83EQ2M2I3 478 aa3.42□□□□□ -1.86
VRK1-205ENST00000555402 HNRNPA1L2Q32P51 320 aaKnown RBP3.42□□□□□ -1.86
VRK1-205ENST00000555402 PDPK2PQ6A1A2 396 aa3.42□□□□□ -1.86
VRK1-205ENST00000555402 ERICH5Q6P6B1 374 aa3.42□□□□□ -1.86
VRK1-205ENST00000555402 CEMP1Q6PRD7 247 aaPredicted RBP3.42□□□□□ -1.86
VRK1-205ENST00000555402 HORMAD1Q86X24 394 aa3.42□□□□□ -1.86
VRK1-205ENST00000555402 CBLN2Q8IUK8 224 aa3.42□□□□□ -1.86
VRK1-205ENST00000555402 CMTM8Q8IZV2 173 aa3.42□□□□□ -1.86
VRK1-205ENST00000555402 VKORC1L1Q8N0U8 176 aa3.42□□□□□ -1.86
VRK1-205ENST00000555402 PGAM4Q8N0Y7 254 aa3.42□□□□□ -1.86
VRK1-205ENST00000555402 NPWQ8N729 165 aa3.42□□□□□ -1.86
VRK1-205ENST00000555402 CYB561D1Q8N8Q1 229 aa3.42□□□□□ -1.86
VRK1-205ENST00000555402 ASCC1Q8N9N2 400 aaKnown RBP3.42□□□□□ -1.86
VRK1-205ENST00000555402 PROKR2Q8NFJ6 384 aa3.42□□□□□ -1.86
VRK1-205ENST00000555402 MRGPRFQ96AM1 343 aa3.42□□□□□ -1.86
VRK1-205ENST00000555402 MSANTD3Q96H12 275 aa3.42□□□□□ -1.86
VRK1-205ENST00000555402 ZNF317Q96PQ6 595 aaPredicted RBP3.42□□□□□ -1.86
VRK1-205ENST00000555402 VCXQ9H320 206 aa3.42□□□□□ -1.86
VRK1-205ENST00000555402 FBXO44Q9H4M3 255 aa3.42□□□□□ -1.86
VRK1-205ENST00000555402 DYRK4Q9NR20 520 aa3.42□□□□□ -1.86
VRK1-205ENST00000555402 MCUBQ9NWR8 336 aa3.42□□□□□ -1.86
VRK1-205ENST00000555402 MTFP1Q9UDX5 166 aa3.42□□□□□ -1.86
VRK1-205ENST00000555402 BZW2Q9Y6E2 419 aaKnown RBP3.42□□□□□ -1.86
VRK1-205ENST00000555402 DENND4AQ7Z401 1863 aa3.41□□□□□ -1.86
VRK1-205ENST00000555402 COL22A1Q8NFW1 1626 aaPredicted RBP3.41□□□□□ -1.86
VRK1-205ENST00000555402 SERPINE3A8MV23 424 aa3.41□□□□□ -1.86
VRK1-205ENST00000555402 GABRPO00591 440 aa3.41□□□□□ -1.86
VRK1-205ENST00000555402 NME4O00746 187 aa3.41□□□□□ -1.86
VRK1-205ENST00000555402 XRCC2O43543 280 aa3.41□□□□□ -1.86
VRK1-205ENST00000555402 SCELO95171 688 aa3.41□□□□□ -1.86
VRK1-205ENST00000555402 RAB4AP20338 218 aa3.41□□□□□ -1.86
VRK1-205ENST00000555402 SERPINB8P50452 374 aa3.41□□□□□ -1.86
VRK1-205ENST00000555402 CDKN2DP55273 166 aa3.41□□□□□ -1.86
VRK1-205ENST00000555402 DAOAP59103 153 aa3.41□□□□□ -1.86
VRK1-205ENST00000555402 RPS23P62266 143 aaKnown RBP3.41□□□□□ -1.86
VRK1-205ENST00000555402 LRRC63Q05C16 580 aa3.41□□□□□ -1.86
VRK1-205ENST00000555402 GABRA6Q16445 453 aa3.41□□□□□ -1.86
VRK1-205ENST00000555402 ZNF829Q3KNS6 432 aaPredicted RBP3.41□□□□□ -1.86
VRK1-205ENST00000555402 Q6P435 159 aa3.41□□□□□ -1.86
VRK1-205ENST00000555402 DEGS2Q6QHC5 323 aa3.41□□□□□ -1.86
VRK1-205ENST00000555402 ZFP2Q6ZN57 461 aa3.41□□□□□ -1.86
VRK1-205ENST00000555402 VTCN1Q7Z7D3 282 aa3.41□□□□□ -1.86
VRK1-205ENST00000555402 OR11H7Q8NGC8 314 aa3.41□□□□□ -1.86
VRK1-205ENST00000555402 OR51F2Q8NH61 342 aa3.41□□□□□ -1.86
VRK1-205ENST00000555402 PIH1D2Q8WWB5 315 aa3.41□□□□□ -1.86
VRK1-205ENST00000555402 ITFG2Q969R8 447 aa3.41□□□□□ -1.86
VRK1-205ENST00000555402 PDXPQ96GD0 296 aa3.41□□□□□ -1.86
VRK1-205ENST00000555402 ZNF285Q96NJ3 590 aa3.41□□□□□ -1.86
VRK1-205ENST00000555402 CSPG4P5Q96PW8 444 aa3.41□□□□□ -1.86
VRK1-205ENST00000555402 TIMM17AQ99595 171 aa3.41□□□□□ -1.86
VRK1-205ENST00000555402 CALN1Q9BXU9 219 aa3.41□□□□□ -1.86
VRK1-205ENST00000555402 SAV1Q9H4B6 383 aaPredicted RBP3.41□□□□□ -1.86
VRK1-205ENST00000555402 SPACA1Q9HBV2 294 aa3.41□□□□□ -1.86
VRK1-205ENST00000555402 TREM1Q9NP99 234 aa3.41□□□□□ -1.86
VRK1-205ENST00000555402 ZDHHC4Q9NPG8 344 aa3.41□□□□□ -1.86
VRK1-205ENST00000555402 ZNF222Q9UK12 451 aa3.41□□□□□ -1.86
VRK1-205ENST00000555402 KLK12Q9UKR0 248 aa3.41□□□□□ -1.86
VRK1-205ENST00000555402 TET2Q6N021 2002 aaPredicted RBP3.41□□□□□ -1.86
VRK1-205ENST00000555402 IGHV5-10-1A0A0J9YXX1 117 aa3.4□□□□□ -1.87
VRK1-205ENST00000555402 A0A0J9YYE9 177 aa3.4□□□□□ -1.87
VRK1-205ENST00000555402 A0A1W2PPV4 95 aa3.4□□□□□ -1.87
VRK1-205ENST00000555402 ANKRD63C9JTQ0 380 aa3.4□□□□□ -1.87
VRK1-205ENST00000555402 RRP8O43159 456 aaKnown RBP3.4□□□□□ -1.87
VRK1-205ENST00000555402 MED6O75586 246 aa3.4□□□□□ -1.87
VRK1-205ENST00000555402 FARS2O95363 451 aaKnown RBP3.4□□□□□ -1.87
VRK1-205ENST00000555402 TRBC1P01850 177 aa3.4□□□□□ -1.87
VRK1-205ENST00000555402 APOA1P02647 267 aa3.4□□□□□ -1.87
VRK1-205ENST00000555402 ZNF823P16415 610 aa3.4□□□□□ -1.87
VRK1-205ENST00000555402 TCP1P17987 556 aaKnown RBP3.4□□□□□ -1.87
VRK1-205ENST00000555402 TCN2P20062 427 aa3.4□□□□□ -1.87
VRK1-205ENST00000555402 DTYMKP23919 212 aa3.4□□□□□ -1.87
VRK1-205ENST00000555402 SSTR5P35346 364 aa3.4□□□□□ -1.87
VRK1-205ENST00000555402 PSMD4P55036 377 aaKnown RBP3.4□□□□□ -1.87
VRK1-205ENST00000555402 MAP3K7CLP57077 242 aa3.4□□□□□ -1.87
VRK1-205ENST00000555402 ZNF121P58317 390 aaPredicted RBP3.4□□□□□ -1.87
VRK1-205ENST00000555402 XRCC4Q13426 336 aa3.4□□□□□ -1.87
VRK1-205ENST00000555402 COTL1Q14019 142 aa3.4□□□□□ -1.87
VRK1-205ENST00000555402 IRF4Q15306 451 aa3.4□□□□□ -1.87
VRK1-205ENST00000555402 UBE2SQ16763 222 aa3.4□□□□□ -1.87
VRK1-205ENST00000555402 CHRFAM7AQ494W8 412 aa3.4□□□□□ -1.87
VRK1-205ENST00000555402 FAM122BQ7Z309 247 aa3.4□□□□□ -1.87
VRK1-205ENST00000555402 LINC00469Q8N7U9 141 aa3.4□□□□□ -1.87
VRK1-205ENST00000555402 COX18Q8N8Q8 333 aa3.4□□□□□ -1.87
VRK1-205ENST00000555402 OR5T3Q8NGG3 340 aa3.4□□□□□ -1.87
VRK1-205ENST00000555402 PIFOQ8TCI5 191 aa3.4□□□□□ -1.87
VRK1-205ENST00000555402 ASZ1Q8WWH4 475 aa3.4□□□□□ -1.87
VRK1-205ENST00000555402 RAB1CQ92928 201 aa3.4□□□□□ -1.87
VRK1-205ENST00000555402 RPEQ96AT9 228 aa3.4□□□□□ -1.87
VRK1-205ENST00000555402 NDFIP1Q9BT67 221 aa3.4□□□□□ -1.87
VRK1-205ENST00000555402 IL22Q9GZX6 179 aa3.4□□□□□ -1.87
VRK1-205ENST00000555402 UBE2ZQ9H832 354 aaPredicted RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms