RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 TMEM91Q6ZNR0 172 aa9.35□□□□□ -0.91
TDP1-211ENST00000555178 LINC01560Q8TB33 94 aa9.35□□□□□ -0.91
TDP1-211ENST00000555178 WFIKKN1Q96NZ8 548 aa9.35□□□□□ -0.91
TDP1-211ENST00000555178 DOK1Q99704 481 aa9.35□□□□□ -0.91
TDP1-211ENST00000555178 KCNN2Q9H2S1 579 aa9.35□□□□□ -0.91
TDP1-211ENST00000555178 COQ3Q9NZJ6 369 aa9.35□□□□□ -0.91
TDP1-211ENST00000555178 OR52A1Q9UKL2 312 aa9.35□□□□□ -0.91
TDP1-211ENST00000555178 SLC25A15Q9Y619 301 aa9.35□□□□□ -0.91
TDP1-211ENST00000555178 USP9YO00507 2555 aaPredicted RBP9.34□□□□□ -0.91
TDP1-211ENST00000555178 PKDREJQ9NTG1 2253 aa9.34□□□□□ -0.91
TDP1-211ENST00000555178 DOPEY2Q9Y3R5 2298 aa9.34□□□□□ -0.91
TDP1-211ENST00000555178 OR5H1A6NKK0 313 aa9.34□□□□□ -0.91
TDP1-211ENST00000555178 M0R135 149 aa9.34□□□□□ -0.91
TDP1-211ENST00000555178 ZNF254O75437 659 aa9.34□□□□□ -0.91
TDP1-211ENST00000555178 ANXA2P07355 339 aaKnown RBP9.34□□□□□ -0.91
TDP1-211ENST00000555178 CCNOP22674 350 aa9.34□□□□□ -0.91
TDP1-211ENST00000555178 OTX1P32242 354 aaPredicted RBP9.34□□□□□ -0.91
TDP1-211ENST00000555178 PCBD1P61457 104 aa9.34□□□□□ -0.91
TDP1-211ENST00000555178 GFOD2Q3B7J2 385 aa9.34□□□□□ -0.91
TDP1-211ENST00000555178 SNAI3Q3KNW1 292 aa9.34□□□□□ -0.91
TDP1-211ENST00000555178 CCDC58Q4VC31 144 aa9.34□□□□□ -0.91
TDP1-211ENST00000555178 C22orf42Q6IC83 251 aa9.34□□□□□ -0.91
TDP1-211ENST00000555178 DEGS2Q6QHC5 323 aa9.34□□□□□ -0.91
TDP1-211ENST00000555178 FAM57BQ71RH2 274 aa9.34□□□□□ -0.91
TDP1-211ENST00000555178 PRSS45Q7RTY3 260 aa9.34□□□□□ -0.91
TDP1-211ENST00000555178 SYT9Q86SS6 491 aa9.34□□□□□ -0.91
TDP1-211ENST00000555178 OR8B12Q8NGG6 310 aa9.34□□□□□ -0.91
TDP1-211ENST00000555178 ZNF799Q96GE5 643 aa9.34□□□□□ -0.91
TDP1-211ENST00000555178 OR14A2Q96R54 314 aa9.34□□□□□ -0.91
TDP1-211ENST00000555178 KCNJ15Q99712 375 aa9.34□□□□□ -0.91
TDP1-211ENST00000555178 PBOV1Q9GZY1 135 aa9.34□□□□□ -0.91
TDP1-211ENST00000555178 HDHD2Q9H0R4 259 aa9.34□□□□□ -0.91
TDP1-211ENST00000555178 STUB1Q9UNE7 303 aa9.34□□□□□ -0.91
TDP1-211ENST00000555178 CELSR2Q9HCU4 2923 aa9.34□□□□□ -0.91
TDP1-211ENST00000555178 A0A1W2PPW3 197 aa9.33□□□□□ -0.92
TDP1-211ENST00000555178 SHISA3A0PJX4 238 aa9.33□□□□□ -0.92
TDP1-211ENST00000555178 SMIM30A4D0T7 59 aa9.33□□□□□ -0.92
TDP1-211ENST00000555178 ACOD1A6NK06 481 aa9.33□□□□□ -0.92
TDP1-211ENST00000555178 P2RY10O00398 339 aa9.33□□□□□ -0.92
TDP1-211ENST00000555178 GABRPO00591 440 aa9.33□□□□□ -0.92
TDP1-211ENST00000555178 LMX1BO60663 402 aa9.33□□□□□ -0.92
TDP1-211ENST00000555178 UBL3O95164 117 aa9.33□□□□□ -0.92
TDP1-211ENST00000555178 TTRP02766 147 aa9.33□□□□□ -0.92
TDP1-211ENST00000555178 IL32P24001 234 aa9.33□□□□□ -0.92
TDP1-211ENST00000555178 PSMA1P25786 263 aaKnown RBP9.33□□□□□ -0.92
TDP1-211ENST00000555178 PCSK6P29122 969 aa9.33□□□□□ -0.92
TDP1-211ENST00000555178 ASCL1P50553 236 aa9.33□□□□□ -0.92
TDP1-211ENST00000555178 MMP16P51512 607 aa9.33□□□□□ -0.92
TDP1-211ENST00000555178 IDH3GP51553 393 aaPredicted RBP9.33□□□□□ -0.92
TDP1-211ENST00000555178 UBE2NP61088 152 aaKnown RBP9.33□□□□□ -0.92
TDP1-211ENST00000555178 GRB2P62993 217 aaKnown RBP9.33□□□□□ -0.92
TDP1-211ENST00000555178 ZNF676Q8N7Q3 588 aa9.33□□□□□ -0.92
TDP1-211ENST00000555178 OR5AK2Q8NH90 309 aa9.33□□□□□ -0.92
TDP1-211ENST00000555178 DCUN1D5Q9BTE7 237 aa9.33□□□□□ -0.92
TDP1-211ENST00000555178 SLC24A3Q9HC58 644 aa9.33□□□□□ -0.92
TDP1-211ENST00000555178 TXNL4BQ9NX01 149 aaKnown RBP9.33□□□□□ -0.92
TDP1-211ENST00000555178 C5orf49A4QMS7 147 aa9.33□□□□□ -0.92
TDP1-211ENST00000555178 ANKRD61A6NGH8 418 aa9.33□□□□□ -0.92
TDP1-211ENST00000555178 C16orf97H3BN30 126 aa9.33□□□□□ -0.92
TDP1-211ENST00000555178 ACSM4P0C7M7 580 aa9.33□□□□□ -0.92
TDP1-211ENST00000555178 ZNF14P17017 642 aaPredicted RBP9.33□□□□□ -0.92
TDP1-211ENST00000555178 SOX2P48431 317 aa9.33□□□□□ -0.92
TDP1-211ENST00000555178 ZNF83P51522 516 aa9.33□□□□□ -0.92
TDP1-211ENST00000555178 TMBIM6P55061 237 aa9.33□□□□□ -0.92
TDP1-211ENST00000555178 SPOCK1Q08629 439 aa9.33□□□□□ -0.92
TDP1-211ENST00000555178 CNPY1Q3B7I2 92 aa9.33□□□□□ -0.92
TDP1-211ENST00000555178 ZNF829Q3KNS6 432 aaPredicted RBP9.33□□□□□ -0.92
TDP1-211ENST00000555178 KRTAP27-1Q3LI81 207 aa9.33□□□□□ -0.92
TDP1-211ENST00000555178 BCL2L15Q5TBC7 163 aa9.33□□□□□ -0.92
TDP1-211ENST00000555178 FDX2Q6P4F2 183 aa9.33□□□□□ -0.92
TDP1-211ENST00000555178 CD200R1LQ6Q8B3 271 aa9.33□□□□□ -0.92
TDP1-211ENST00000555178 RHOUQ7L0Q8 258 aa9.33□□□□□ -0.92
TDP1-211ENST00000555178 OR2AE1Q8NHA4 323 aa9.33□□□□□ -0.92
TDP1-211ENST00000555178 ABHD4Q8TB40 342 aa9.33□□□□□ -0.92
TDP1-211ENST00000555178 RAB2BQ8WUD1 216 aa9.33□□□□□ -0.92
TDP1-211ENST00000555178 DGCR14Q96DF8 476 aaKnown RBP9.33□□□□□ -0.92
TDP1-211ENST00000555178 FAM192AQ9GZU8 254 aa9.33□□□□□ -0.92
TDP1-211ENST00000555178 OR51B6Q9H340 312 aa9.33□□□□□ -0.92
TDP1-211ENST00000555178 FASNP49327 2511 aaKnown RBP9.33□□□□□ -0.92
TDP1-211ENST00000555178 A6NIN4 97 aa9.32□□□□□ -0.92
TDP1-211ENST00000555178 SIAH2O43255 324 aa9.32□□□□□ -0.92
TDP1-211ENST00000555178 RGS9O75916 674 aaPredicted RBP9.32□□□□□ -0.92
TDP1-211ENST00000555178 STOMP27105 288 aa9.32□□□□□ -0.92
TDP1-211ENST00000555178 GPR50Q13585 617 aa9.32□□□□□ -0.92
TDP1-211ENST00000555178 SLC25A35Q3KQZ1 300 aa9.32□□□□□ -0.92
TDP1-211ENST00000555178 FBXL19-AS1Q494R0 122 aa9.32□□□□□ -0.92
TDP1-211ENST00000555178 TMEM53Q6P2H8 277 aa9.32□□□□□ -0.92
TDP1-211ENST00000555178 C1orf162Q8NEQ5 155 aaPredicted RBP9.32□□□□□ -0.92
TDP1-211ENST00000555178 ZNF420Q8TAQ5 688 aaPredicted RBP9.32□□□□□ -0.92
TDP1-211ENST00000555178 OR51E1Q8TCB6 317 aa9.32□□□□□ -0.92
TDP1-211ENST00000555178 ASB5Q8WWX0 329 aa9.32□□□□□ -0.92
TDP1-211ENST00000555178 BOD1Q96IK1 185 aa9.32□□□□□ -0.92
TDP1-211ENST00000555178 COQ7Q99807 217 aa9.32□□□□□ -0.92
TDP1-211ENST00000555178 POFUT1Q9H488 388 aa9.32□□□□□ -0.92
TDP1-211ENST00000555178 KCNJ16Q9NPI9 418 aa9.32□□□□□ -0.92
TDP1-211ENST00000555178 ELOVL5Q9NYP7 299 aa9.32□□□□□ -0.92
TDP1-211ENST00000555178 ZNF281Q9Y2X9 895 aa9.32□□□□□ -0.92
TDP1-211ENST00000555178 NBPF19A0A087WUL8 3843 aa9.32□□□□□ -0.92
TDP1-211ENST00000555178 ARPC4-TTLL3A0A0A6YYG9 625 aa9.32□□□□□ -0.92
TDP1-211ENST00000555178 IGHV1-18A0A0C4DH31 117 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms