RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 SLC16A7O60669 478 aa3.91□□□□□ -1.78
VRK1-203ENST00000555067 ZNF253O75346 499 aa3.91□□□□□ -1.78
VRK1-203ENST00000555067 ATP5HO75947 161 aa3.91□□□□□ -1.78
VRK1-203ENST00000555067 HPRT1P00492 218 aa3.91□□□□□ -1.78
VRK1-203ENST00000555067 PSKH1P11801 424 aa3.91□□□□□ -1.78
VRK1-203ENST00000555067 MAGP20916 626 aa3.91□□□□□ -1.78
VRK1-203ENST00000555067 CMA1P23946 247 aa3.91□□□□□ -1.78
VRK1-203ENST00000555067 HLA-DMAP28067 261 aa3.91□□□□□ -1.78
VRK1-203ENST00000555067 UBE2E1P51965 193 aa3.91□□□□□ -1.78
VRK1-203ENST00000555067 ZNF121P58317 390 aaPredicted RBP3.91□□□□□ -1.78
VRK1-203ENST00000555067 TSPAN5P62079 268 aa3.91□□□□□ -1.78
VRK1-203ENST00000555067 ST3GAL4Q11206 333 aa3.91□□□□□ -1.78
VRK1-203ENST00000555067 BNIP2Q12982 314 aa3.91□□□□□ -1.78
VRK1-203ENST00000555067 ASAH1Q13510 395 aa3.91□□□□□ -1.78
VRK1-203ENST00000555067 ZNHIT3Q15649 155 aaPredicted RBP3.91□□□□□ -1.78
VRK1-203ENST00000555067 OR2B11Q5JQS5 317 aa3.91□□□□□ -1.78
VRK1-203ENST00000555067 C1orf100Q5SVJ3 147 aa3.91□□□□□ -1.78
VRK1-203ENST00000555067 KHDRBS2Q5VWX1 349 aaKnown RBP3.91□□□□□ -1.78
VRK1-203ENST00000555067 FRMPD2BQ6IN97 320 aa3.91□□□□□ -1.78
VRK1-203ENST00000555067 COX15Q7KZN9 410 aa3.91□□□□□ -1.78
VRK1-203ENST00000555067 ZNF677Q86XU0 584 aa3.91□□□□□ -1.78
VRK1-203ENST00000555067 CSNK1G2-AS1Q8NCQ2 148 aa3.91□□□□□ -1.78
VRK1-203ENST00000555067 OR52E2Q8NGJ4 325 aa3.91□□□□□ -1.78
VRK1-203ENST00000555067 OR9G1Q8NH87 305 aa3.91□□□□□ -1.78
VRK1-203ENST00000555067 PHF10Q8WUB8 498 aaKnown RBP3.91□□□□□ -1.78
VRK1-203ENST00000555067 DNAJB3Q8WWF6 145 aa3.91□□□□□ -1.78
VRK1-203ENST00000555067 IFT81Q8WYA0 676 aa3.91□□□□□ -1.78
VRK1-203ENST00000555067 OR5P2Q8WZ92 322 aa3.91□□□□□ -1.78
VRK1-203ENST00000555067 FGGYQ96C11 551 aa3.91□□□□□ -1.78
VRK1-203ENST00000555067 RCN3Q96D15 328 aa3.91□□□□□ -1.78
VRK1-203ENST00000555067 ADTRPQ96IZ2 230 aa3.91□□□□□ -1.78
VRK1-203ENST00000555067 B3GALT6Q96L58 329 aa3.91□□□□□ -1.78
VRK1-203ENST00000555067 UBE2E2Q96LR5 201 aa3.91□□□□□ -1.78
VRK1-203ENST00000555067 RBBP8Q99708 897 aa3.91□□□□□ -1.78
VRK1-203ENST00000555067 DCUN1D5Q9BTE7 237 aa3.91□□□□□ -1.78
VRK1-203ENST00000555067 RSG1Q9BU20 258 aa3.91□□□□□ -1.78
VRK1-203ENST00000555067 ZNF426Q9BUY5 554 aa3.91□□□□□ -1.78
VRK1-203ENST00000555067 OSBPL11Q9BXB4 747 aa3.91□□□□□ -1.78
VRK1-203ENST00000555067 GNB4Q9HAV0 340 aa3.91□□□□□ -1.78
VRK1-203ENST00000555067 UGT1A7Q9HAW7 530 aa3.91□□□□□ -1.78
VRK1-203ENST00000555067 UGT1A8Q9HAW9 530 aa3.91□□□□□ -1.78
VRK1-203ENST00000555067 ABCB10Q9NRK6 738 aa3.91□□□□□ -1.78
VRK1-203ENST00000555067 SLC39A1Q9NY26 324 aa3.91□□□□□ -1.78
VRK1-203ENST00000555067 EMC3Q9P0I2 261 aa3.91□□□□□ -1.78
VRK1-203ENST00000555067 XCL2Q9UBD3 114 aa3.91□□□□□ -1.78
VRK1-203ENST00000555067 CES1P1Q9UKY3 287 aa3.91□□□□□ -1.78
VRK1-203ENST00000555067 ABCB11O95342 1321 aa3.91□□□□□ -1.78
VRK1-203ENST00000555067 A0A0B4J2E0 115 aa3.9□□□□□ -1.79
VRK1-203ENST00000555067 GATCO43716 136 aaKnown RBP3.9□□□□□ -1.79
VRK1-203ENST00000555067 UTS2O95399 124 aa3.9□□□□□ -1.79
VRK1-203ENST00000555067 PGA4P0DJD7 388 aa3.9□□□□□ -1.79
VRK1-203ENST00000555067 PGA3P0DJD8 388 aa3.9□□□□□ -1.79
VRK1-203ENST00000555067 AK4P27144 223 aaPredicted RBP3.9□□□□□ -1.79
VRK1-203ENST00000555067 PSMB5P28074 263 aa3.9□□□□□ -1.79
VRK1-203ENST00000555067 NTSP30990 170 aa3.9□□□□□ -1.79
VRK1-203ENST00000555067 DLX1P56177 255 aa3.9□□□□□ -1.79
VRK1-203ENST00000555067 AP1S2P56377 157 aa3.9□□□□□ -1.79
VRK1-203ENST00000555067 RPL18AQ02543 176 aaKnown RBP3.9□□□□□ -1.79
VRK1-203ENST00000555067 FADDQ13158 208 aa3.9□□□□□ -1.79
VRK1-203ENST00000555067 TGIF1Q15583 401 aa3.9□□□□□ -1.79
VRK1-203ENST00000555067 RGS21Q2M5E4 152 aa3.9□□□□□ -1.79
VRK1-203ENST00000555067 CCNJQ5T5M9 372 aa3.9□□□□□ -1.79
VRK1-203ENST00000555067 IDNKQ5T6J7 187 aa3.9□□□□□ -1.79
VRK1-203ENST00000555067 FAM27D1Q5T7N8 215 aa3.9□□□□□ -1.79
VRK1-203ENST00000555067 C1orf146Q5VVC0 180 aa3.9□□□□□ -1.79
VRK1-203ENST00000555067 EPGNQ6UW88 154 aa3.9□□□□□ -1.79
VRK1-203ENST00000555067 FAM220AQ7Z4H9 259 aa3.9□□□□□ -1.79
VRK1-203ENST00000555067 OR2L5Q8NG80 312 aa3.9□□□□□ -1.79
VRK1-203ENST00000555067 FANK1Q8TC84 345 aa3.9□□□□□ -1.79
VRK1-203ENST00000555067 RORBQ92753 470 aa3.9□□□□□ -1.79
VRK1-203ENST00000555067 FLYWCH2Q96CP2 140 aaKnown RBP3.9□□□□□ -1.79
VRK1-203ENST00000555067 ZNF488Q96MN9 340 aa3.9□□□□□ -1.79
VRK1-203ENST00000555067 OR5M11Q96RB7 305 aa3.9□□□□□ -1.79
VRK1-203ENST00000555067 P2RX4Q99571 388 aa3.9□□□□□ -1.79
VRK1-203ENST00000555067 TSNAXQ99598 290 aaKnown RBP3.9□□□□□ -1.79
VRK1-203ENST00000555067 PORCNQ9H237 461 aa3.9□□□□□ -1.79
VRK1-203ENST00000555067 ISG20L2Q9H9L3 353 aaKnown RBP3.9□□□□□ -1.79
VRK1-203ENST00000555067 C6orf50Q9HD87 102 aa3.9□□□□□ -1.79
VRK1-203ENST00000555067 FBXO8Q9NRD0 319 aa3.9□□□□□ -1.79
VRK1-203ENST00000555067 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.9□□□□□ -1.79
VRK1-203ENST00000555067 KLF12Q9Y4X4 402 aa3.9□□□□□ -1.79
VRK1-203ENST00000555067 ZNF646O15015 1829 aaPredicted RBP3.9□□□□□ -1.79
VRK1-203ENST00000555067 MAPK8IP3Q9UPT6 1336 aa3.9□□□□□ -1.79
VRK1-203ENST00000555067 DENND4AQ7Z401 1863 aa3.9□□□□□ -1.79
VRK1-203ENST00000555067 GOLGA8IPA6NC78 632 aa3.89□□□□□ -1.79
VRK1-203ENST00000555067 A6NDN8 102 aa3.89□□□□□ -1.79
VRK1-203ENST00000555067 GOLGA8JA6NMD2 632 aa3.89□□□□□ -1.79
VRK1-203ENST00000555067 HIDE1A8MVS5 230 aa3.89□□□□□ -1.79
VRK1-203ENST00000555067 SRRM5B3KS81 715 aa3.89□□□□□ -1.79
VRK1-203ENST00000555067 GOLGA8KD6RF30 607 aa3.89□□□□□ -1.79
VRK1-203ENST00000555067 GOLGA8MH3BSY2 632 aa3.89□□□□□ -1.79
VRK1-203ENST00000555067 H7C1H1 209 aa3.89□□□□□ -1.79
VRK1-203ENST00000555067 KBTBD11O94819 623 aa3.89□□□□□ -1.79
VRK1-203ENST00000555067 DUSP14O95147 198 aaKnown RBP3.89□□□□□ -1.79
VRK1-203ENST00000555067 GOLGA8HP0CJ92 632 aa3.89□□□□□ -1.79
VRK1-203ENST00000555067 PGA5P0DJD9 388 aa3.89□□□□□ -1.79
VRK1-203ENST00000555067 GIMD1P0DJR0 217 aa3.89□□□□□ -1.79
VRK1-203ENST00000555067 PGAM2P15259 253 aa3.89□□□□□ -1.79
VRK1-203ENST00000555067 FMO3P31513 532 aa3.89□□□□□ -1.79
VRK1-203ENST00000555067 ARL2P36404 184 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms