RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 DGAT2L6Q6ZPD8 337 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 PARP16Q8N5Y8 322 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 OR51E1Q8TCB6 317 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 RPEQ96AT9 228 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 RNF2Q99496 336 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 ARRDC1-AS1Q9H2J1 176 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 UBR2Q8IWV8 1755 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 SPINK4O60575 86 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 OR3A4PP47883 348 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 NOVA1P51513 510 aaKnown RBP6.29□□□□□ -1.4
SYNE2-216ENST00000555002 ZNF789Q5FWF6 425 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 C2CD4CQ8TF44 421 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 LHX4Q969G2 390 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 POM121L2Q96KW2 1035 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 RAB18Q9NP72 206 aa6.29□□□□□ -1.4
SYNE2-216ENST00000555002 SPINK9Q5DT21 86 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 CCDC190Q86UF4 302 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 TMEM231Q9H6L2 316 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 A0A1W2PR80 420 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 ZNF727A8MUV8 499 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 F2RL2O00254 374 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 SPCS2Q15005 226 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 ASTLQ6HA08 431 aaPredicted RBP6.28□□□□□ -1.4
SYNE2-216ENST00000555002 C5orf46Q6UWT4 87 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 OLIG3Q7RTU3 272 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 PIANPQ8IYJ0 282 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 OR51S1Q8NGJ8 323 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 TSLPQ969D9 159 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 SMIM7Q9BQ49 75 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 PRR14Q9BWN1 585 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 WDR61Q9GZS3 305 aaKnown RBP6.28□□□□□ -1.4
SYNE2-216ENST00000555002 PSENENQ9NZ42 101 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 ICAM5Q9UMF0 924 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 ECM29Q5VYK3 1845 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 LOC107986453A0A1B0GWG9 222 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 OR2F2O95006 317 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 TSPAN12O95859 305 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 ZNF528Q3MIS6 628 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 ANKRD34AQ69YU3 496 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 OR2L13Q8N349 312 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 SLC46A2Q9BY10 475 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 CTSFQ9UBX1 484 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 KCPQ6ZWJ8 1503 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 FPR3P25089 353 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 SHC1P29353 583 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 WFDC3Q8IUB2 231 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 MAML2Q8IZL2 1156 aaPredicted RBP6.28□□□□□ -1.4
SYNE2-216ENST00000555002 LILRA2Q8N149 483 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 PRSS35Q8N3Z0 413 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 OR5H6Q8NGV6 325 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 RXFP4Q8TDU9 374 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 RNF141Q8WVD5 230 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 NDRG4Q9ULP0 352 aaKnown RBP6.28□□□□□ -1.4
SYNE2-216ENST00000555002 C1SP09871 688 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 FOXK2Q01167 660 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 DMRTC1Q5HYR2 192 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 OR4F17Q8NGA8 305 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 UGT2A1Q9Y4X1 527 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 DOCK8Q8NF50 2099 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 SLCO2B1O94956 709 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 CRYAAP02489 173 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 SCGB1A1P11684 91 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 TMEM267Q0VDI3 215 aaPredicted RBP6.28□□□□□ -1.4
SYNE2-216ENST00000555002 RPS19BP1Q86WX3 136 aaKnown RBP6.28□□□□□ -1.4
SYNE2-216ENST00000555002 ZNF573Q86YE8 665 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 ZNF391Q9UJN7 358 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 K7EQS6 105 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 GASTP01350 101 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 OR2T7P0C7T2 308 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 ADRA2CP18825 462 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 ECI1P42126 302 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 HCCSP53701 268 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 C21orf58P58505 322 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 CSNK1G2P78368 415 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 LAX1Q8IWV1 398 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 PRR7Q8TB68 274 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 PCYT2Q99447 389 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 C16orf70Q9BSU1 422 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 TMEM59LQ9UK28 342 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 KLF13Q9Y2Y9 288 aaPredicted RBP6.28□□□□□ -1.4
SYNE2-216ENST00000555002 TIMM10BQ9Y5J6 103 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 SOCS7O14512 581 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 SOD1P00441 154 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 NKAIN1Q4KMZ8 207 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 MBOAT2Q6ZWT7 520 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 ZNF534Q76KX8 674 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 NKAIN3Q8N8D7 197 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 SLC38A9Q8NBW4 561 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 A0A1W2PPQ1 181 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 MEX3AA1L020 520 aaKnown RBP6.28□□□□□ -1.4
SYNE2-216ENST00000555002 OR5AL1P0C617 328 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 MAMSTRQ6ZN01 415 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 ETFBKMTQ8IXQ9 262 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 ARL6IP6Q8N6S5 226 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 TTC9Q92623 222 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 CABLES2Q9BTV7 478 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 SLC25A22Q9H936 323 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 HCSTQ9UBK5 93 aa6.28□□□□□ -1.4
SYNE2-216ENST00000555002 CCDC187A0A096LP49 1063 aa6.27□□□□□ -1.4
SYNE2-216ENST00000555002 ACOT8O14734 319 aa6.27□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms