RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 FAM46BQ96A09 425 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 RPUSD4Q96CM3 377 aaKnown RBP3.92□□□□□ -1.78
ATXN3-227ENST00000554491 ASB9Q96DX5 294 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 CENPNQ96H22 339 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-227ENST00000554491 CDKN2AIPNLQ96HQ2 116 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 CPB2Q96IY4 423 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 HARBI1Q96MB7 349 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 ZNF583Q96ND8 569 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 SLC6A7Q99884 636 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 SULT4A1Q9BR01 284 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 PCDHAC1Q9H158 963 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 P2RY12Q9H244 342 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 FAM124BQ9H5Z6 455 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-227ENST00000554491 MTHFD2LQ9H903 347 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-227ENST00000554491 MED20Q9H944 212 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 LMAN1LQ9HAT1 526 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 WFDC1Q9HC57 220 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 GPN1Q9HCN4 374 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-227ENST00000554491 SAYSD1Q9NPB0 183 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 MRPL17Q9NRX2 175 aaKnown RBP3.92□□□□□ -1.78
ATXN3-227ENST00000554491 PLEKHJ1Q9NW61 149 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 RBFOX1Q9NWB1 397 aaKnown RBP3.92□□□□□ -1.78
ATXN3-227ENST00000554491 HCFC1R1Q9NWW0 138 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 TAS2R13Q9NYV9 303 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 DKK4Q9UBT3 224 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 OR14J1Q9UGF5 321 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 STEAP1Q9UHE8 339 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 CRLS1Q9UJA2 301 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 FBXW2Q9UKT8 454 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 FZD4Q9ULV1 537 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 PDE10AQ9Y233 779 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 RASD1Q9Y272 281 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 UBIAD1Q9Y5Z9 338 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 ARID2Q68CP9 1835 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 ABCA7Q8IZY2 2146 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 CREBBPQ92793 2442 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 CEP192Q8TEP8 1941 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 ITPR3Q14573 2671 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 TRAV30A0A087WSZ9 112 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 NBPF19A0A087WUL8 3843 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 TBC1D3DA0A087WVF3 549 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 MEIKINA0A087WXM9 373 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 TBC1D3IA0A087WXS9 549 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 A0A087WZ62 844 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 TBC1D3EA0A087X179 549 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 TRBV2A0A0J9YWF9 115 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 C7orf66A4D0T2 115 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 OR5H14A6NHG9 310 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 TBC1D3LB9A6J9 549 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 INMT-MINDY4F8WBC2 141 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 FAAHO00519 579 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 DSCR3O14972 297 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 ANKRD28O15084 1053 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 CCL25O15444 150 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 ZNF208O43345 1280 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 KLK8O60259 260 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 PROSCO94903 275 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 UBR5O95071 2799 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-227ENST00000554491 SIX3O95343 332 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-227ENST00000554491 LSM8O95777 96 aaKnown RBP3.91□□□□□ -1.78
ATXN3-227ENST00000554491 IGSF6O95976 241 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 CST4P01036 141 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 HLA-DQB1P01920 261 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 KLKB1P03952 638 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 OR8U9P0C7N5 309 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 GKN3PP0CG01 181 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 UNGP13051 313 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-227ENST00000554491 MYF5P13349 255 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 HOXB2P14652 356 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 CHRNB2P17787 502 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 SAT1P21673 171 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 ZBTB25P24278 435 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 HTR2AP28223 471 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 HTR2CP28335 458 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 GLP1RP43220 463 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 RFX3P48380 749 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 CSNK1A1P48729 337 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 TNFSF10P50591 281 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 CYP2J2P51589 502 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 HCCSP53701 268 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 CRISP1P54107 249 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 UCP3P55916 312 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 BIDP55957 195 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 RIPPLY3P57055 190 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 RAB8AP61006 207 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 HBA1P69905 142 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 NTHL1P78549 312 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 MS4A2Q01362 244 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 ZFP36L1Q07352 338 aaKnown RBP3.91□□□□□ -1.78
ATXN3-227ENST00000554491 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.91□□□□□ -1.78
ATXN3-227ENST00000554491 SRSF6Q13247 344 aaKnown RBP3.91□□□□□ -1.78
ATXN3-227ENST00000554491 OR5I1Q13606 314 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 KIAA0141Q14154 515 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-227ENST00000554491 SIX1Q15475 284 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-227ENST00000554491 SNRNP35Q16560 246 aaKnown RBP3.91□□□□□ -1.78
ATXN3-227ENST00000554491 SGCBQ16585 318 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 NTRK2Q16620 822 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 UGCGQ16739 394 aa3.91□□□□□ -1.78
ATXN3-227ENST00000554491 KCTD19Q17RG1 926 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-227ENST00000554491 PRTGQ2VWP7 1150 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms