RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 C9orf152Q5JTZ5 239 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 C9orf135Q5VTT2 229 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 KHDRBS2Q5VWX1 349 aaKnown RBP3.82□□□□□ -1.8
ATXN3-225ENST00000554214 NKAIN2Q5VXU1 208 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 TTC23Q5W5X9 447 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 LEMD1Q68G75 181 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 ZNF470Q6ECI4 717 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 ACSM5Q6NUN0 579 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 TMEM270Q6UE05 265 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 TEX261Q6UWH6 196 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 BTNL3Q6UXE8 466 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 SLC16A13Q7RTY0 426 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 HSD17B13Q7Z5P4 300 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-225ENST00000554214 CACUL1Q86Y37 369 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 C4orf19Q8IY42 314 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 BLIDQ8IZY5 108 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 PRSS35Q8N3Z0 413 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 STPG2Q8N412 459 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 LRRC18Q8N456 261 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 KLHDC1Q8N7A1 406 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 NECAB1Q8N987 351 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 HSD17B11Q8NBQ5 300 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 FBXL13Q8NEE6 735 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 OR4M2Q8NGB6 313 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 OR13D1Q8NGV5 346 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 TERB2Q8NHR7 220 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 RHOXF1Q8NHV9 184 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 ACTL9Q8TC94 416 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 KCNE4Q8WWG9 221 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 RAB1CQ92928 201 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 HAVCR1Q96D42 359 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 ATXN7L3BQ96GX2 97 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 HSFY1Q96LI6 401 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 C2orf48Q96LS8 159 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 KCNA7Q96RP8 456 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 PHB2Q99623 299 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 CHP1Q99653 195 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 RBBP8Q99708 897 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 NIPSNAP1Q9BPW8 284 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 HSD17B14Q9BPX1 270 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 KCTD14Q9BQ13 255 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-225ENST00000554214 ROGDIQ9GZN7 287 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 ZNF430Q9H8G1 570 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-225ENST00000554214 CACYBPQ9HB71 228 aaKnown RBP3.82□□□□□ -1.8
ATXN3-225ENST00000554214 ABCB9Q9NP78 766 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 POLE4Q9NR33 117 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 DUS2Q9NX74 493 aaKnown RBP3.82□□□□□ -1.8
ATXN3-225ENST00000554214 MS4A12Q9NXJ0 267 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 USE1Q9NZ43 259 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 GCNT4Q9P109 453 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 ZNF282Q9UDV7 671 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-225ENST00000554214 LEF1Q9UJU2 399 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-225ENST00000554214 CLEC4EQ9ULY5 219 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 MMP17Q9ULZ9 603 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 SLC22A13Q9Y226 551 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 MAB21L2Q9Y586 359 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 U3KQ87 197 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 MYOFQ9NZM1 2061 aa3.82□□□□□ -1.8
ATXN3-225ENST00000554214 PTPN13Q12923 2485 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 IGHV1OR15-9A0A0B4J2B8 117 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 A0A1W2PPK0 400 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 A0A1W2PPV4 95 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 TRIM49BA6NDI0 452 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 FABP12A6NFH5 140 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 A8MXK9 166 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 PRAMEF26H0Y7S4 382 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 DNASE2O00115 360 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-225ENST00000554214 HCRTO43612 131 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 NME2P1O60361 137 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 TPST1O60507 370 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 MRPS14O60783 128 aaKnown RBP3.81□□□□□ -1.8
ATXN3-225ENST00000554214 SCGB2A1O75556 95 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 CEACAM4O75871 244 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 GADD45GO95257 159 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 AP2A1O95782 977 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 TGFAP01135 160 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 ATP1B1P05026 303 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 CSN3P07498 182 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 NBEAP1P0C6P0 100 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 GIMD1P0DJR0 217 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 MUC1P15941 1255 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-225ENST00000554214 HMGA1P17096 107 aaKnown RBP3.81□□□□□ -1.8
ATXN3-225ENST00000554214 GABRG2P18507 467 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 CNR1P21554 472 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 GLRA1P23415 457 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 IL12BP29460 328 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 SDC4P31431 198 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 OTX2P32243 289 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 TNFSF9P41273 254 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 OR3A2P47893 321 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 XKP51811 444 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 VSX2P58304 361 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-225ENST00000554214 CDC42P60953 191 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 TFAMQ00059 246 aaKnown RBP3.81□□□□□ -1.8
ATXN3-225ENST00000554214 GTF2BQ00403 316 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 IRF8Q02556 426 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 ECH1Q13011 328 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 RCAN2Q14206 197 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 PRAMEF5Q5TYX0 476 aa3.81□□□□□ -1.8
ATXN3-225ENST00000554214 PRAMEF6Q5VXH4 476 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms