RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 CCL21O00585 134 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 AGPAT2O15120 278 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 EEDO75530 441 aaKnown RBP2.21□□□□□ -2.06
SCFD1-210ENST00000553693 FGGP02679 453 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 GAPDHP04406 335 aaKnown RBP2.21□□□□□ -2.06
SCFD1-210ENST00000553693 S100A9P06702 114 aaKnown RBP2.21□□□□□ -2.06
SCFD1-210ENST00000553693 RHOXF2BP0C7M4 288 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 CCDC172P0C7W6 258 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 CASQ1P31415 396 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 FMO3P31513 532 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 DDOSTP39656 456 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 VHLP40337 213 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 RPS9P46781 194 aaKnown RBP2.21□□□□□ -2.06
SCFD1-210ENST00000553693 MRPL19P49406 292 aaKnown RBP2.21□□□□□ -2.06
SCFD1-210ENST00000553693 BCAP31P51572 246 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 FBXW4P57775 412 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 RAP1BP61224 184 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 ADARB1P78563 741 aaKnown RBP2.21□□□□□ -2.06
SCFD1-210ENST00000553693 CYTH1Q15438 398 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 ATP6AP1Q15904 470 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 ZNF77Q15935 545 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 XKR4Q5GH76 650 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 PIP5KL1Q5T9C9 394 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 TRIM40Q6P9F5 258 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 TMIGD1Q6UXZ0 262 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 RNF165Q6ZSG1 346 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 ZNF429Q86V71 674 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 ITPRIPQ8IWB1 547 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 MFSD6LQ8IWD5 586 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 WDFY3Q8IZQ1 3526 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 PDIK1LQ8N165 341 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 JAGN1Q8N5M9 183 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 ZNF321PQ8N8H1 164 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 TTC29Q8NA56 475 aaPredicted RBP2.21□□□□□ -2.06
SCFD1-210ENST00000553693 PLPPR1Q8TBJ4 325 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 FAM110BQ8TC76 370 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 FGF14Q92915 247 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 UCN3Q969E3 161 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 FAM210BQ96KR6 192 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 PRRC1Q96M27 445 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 MS4A4EQ96PG1 132 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 SLC29A1Q99808 456 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 SH3GL1Q99961 368 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 KLHDC3Q9BQ90 382 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 RHOXF2Q9BQY4 288 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 SLC25A22Q9H936 323 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 SIAEQ9HAT2 523 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 ADAP2Q9NPF8 381 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 PTTG3PQ9NZH4 202 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 PDP1Q9P0J1 537 aaPredicted RBP2.21□□□□□ -2.06
SCFD1-210ENST00000553693 IFNKQ9P0W0 207 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 GNPTGQ9UJJ9 305 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 RAB23Q9ULC3 237 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 VANGL2Q9ULK5 521 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 SAR1BQ9Y6B6 198 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 LAMA4Q16363 1823 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 PATJQ8NI35 1801 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 UNC79Q9P2D8 2635 aa2.21□□□□□ -2.06
SCFD1-210ENST00000553693 IGF2RP11717 2491 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 FREM2Q5SZK8 3169 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 DOCK5Q9H7D0 1870 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 C2orf16Q68DN1 1984 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 HELZ2Q9BYK8 2649 aaKnown RBP2.2□□□□□ -2.06
SCFD1-210ENST00000553693 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.2□□□□□ -2.06
SCFD1-210ENST00000553693 A0A0B4J2A0 478 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 A0A1W2PPE3 182 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 RBMY1BA6NDE4 496 aaKnown RBP2.2□□□□□ -2.06
SCFD1-210ENST00000553693 RBMY1EA6NEQ0 496 aaKnown RBP2.2□□□□□ -2.06
SCFD1-210ENST00000553693 C12orf71A8MTZ7 269 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 A8MUA0 341 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 FAM25EA8MYX2 175 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 M0R3G1 203 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 HSBP1O75506 76 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 MED6O75586 246 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 CCNB2O95067 398 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 KLF8O95600 359 aaPredicted RBP2.2□□□□□ -2.06
SCFD1-210ENST00000553693 CLIC3O95833 236 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 PRB1P04280 392 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 PLEKP08567 350 aaPredicted RBP2.2□□□□□ -2.06
SCFD1-210ENST00000553693 GIPP09681 153 aaPredicted RBP2.2□□□□□ -2.06
SCFD1-210ENST00000553693 RBMY1DP0C7P1 496 aaKnown RBP2.2□□□□□ -2.06
SCFD1-210ENST00000553693 ZNF806P0C7X5 589 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 RBMY1A1P0DJD3 496 aaKnown RBP2.2□□□□□ -2.06
SCFD1-210ENST00000553693 PRKACAP17612 351 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 MAGP20916 626 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 GSTM3P21266 225 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 MSR1P21757 451 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 COX7A1P24310 79 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 CXCR2P25025 360 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 STOMP27105 288 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 PTGDSP41222 190 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 SLC11A1P49279 550 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 TMED10P49755 219 aaKnown RBP2.2□□□□□ -2.06
SCFD1-210ENST00000553693 CCNHP51946 323 aaPredicted RBP2.2□□□□□ -2.06
SCFD1-210ENST00000553693 APOC4P55056 127 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 TAS2R19P59542 299 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 EIF3EP60228 445 aaKnown RBP2.2□□□□□ -2.06
SCFD1-210ENST00000553693 LIPEQ05469 1076 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 CLINT1Q14677 625 aa2.2□□□□□ -2.06
SCFD1-210ENST00000553693 NSDHLQ15738 373 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms