RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 LAMP5Q9UJQ1 280 aa19.46■□□□□ 0.71
TDP1-206ENST00000553569 ZNF469Q96JG9 3925 aaPredicted RBP19.46■□□□□ 0.71
TDP1-206ENST00000553569 ACANP16112 2415 aa19.45■□□□□ 0.7
TDP1-206ENST00000553569 TPD52L2O43399 206 aaKnown RBP19.45■□□□□ 0.7
TDP1-206ENST00000553569 IGHV1-46P01743 117 aa19.45■□□□□ 0.7
TDP1-206ENST00000553569 H2BFMP0C1H6 154 aa19.45■□□□□ 0.7
TDP1-206ENST00000553569 RAC2P15153 192 aa19.45■□□□□ 0.7
TDP1-206ENST00000553569 FOSL1P15407 271 aa19.45■□□□□ 0.7
TDP1-206ENST00000553569 KITLGP21583 273 aa19.45■□□□□ 0.7
TDP1-206ENST00000553569 ANOS1P23352 680 aa19.45■□□□□ 0.7
TDP1-206ENST00000553569 OPRL1P41146 370 aa19.45■□□□□ 0.7
TDP1-206ENST00000553569 CCL8P80075 99 aa19.45■□□□□ 0.7
TDP1-206ENST00000553569 MALLQ13021 153 aa19.45■□□□□ 0.7
TDP1-206ENST00000553569 OR2T2Q6IF00 324 aa19.45■□□□□ 0.7
TDP1-206ENST00000553569 FBXW12Q6X9E4 464 aa19.45■□□□□ 0.7
TDP1-206ENST00000553569 OR8J1Q8NGP2 316 aa19.45■□□□□ 0.7
TDP1-206ENST00000553569 HAVCR1Q96D42 359 aa19.45■□□□□ 0.7
TDP1-206ENST00000553569 PIMREGQ9BSJ6 248 aa19.45■□□□□ 0.7
TDP1-206ENST00000553569 TTTY10Q9BZA0 68 aa19.45■□□□□ 0.7
TDP1-206ENST00000553569 YIPF3Q9GZM5 350 aa19.45■□□□□ 0.7
TDP1-206ENST00000553569 CYSLTR2Q9NS75 346 aa19.45■□□□□ 0.7
TDP1-206ENST00000553569 CGGBP1Q9UFW8 167 aaPredicted RBP19.45■□□□□ 0.7
TDP1-206ENST00000553569 CR1P17927 2039 aa19.44■□□□□ 0.7
TDP1-206ENST00000553569 C5orf63A6NC05 138 aa19.44■□□□□ 0.7
TDP1-206ENST00000553569 ANXA2P07355 339 aaKnown RBP19.44■□□□□ 0.7
TDP1-206ENST00000553569 GGTLC2Q14390 218 aa19.44■□□□□ 0.7
TDP1-206ENST00000553569 LRRC36Q1X8D7 754 aa19.44■□□□□ 0.7
TDP1-206ENST00000553569 PCGF3Q3KNV8 242 aa19.44■□□□□ 0.7
TDP1-206ENST00000553569 ZMAT1Q5H9K5 638 aa19.44■□□□□ 0.7
TDP1-206ENST00000553569 LRRN1Q6UXK5 716 aa19.44■□□□□ 0.7
TDP1-206ENST00000553569 HRASLS5Q96KN8 279 aa19.44■□□□□ 0.7
TDP1-206ENST00000553569 SMR3AQ99954 134 aa19.44■□□□□ 0.7
TDP1-206ENST00000553569 GMPPBQ9Y5P6 360 aa19.44■□□□□ 0.7
TDP1-206ENST00000553569 LOC390937A0A1W2PQ73 354 aa19.43■□□□□ 0.7
TDP1-206ENST00000553569 SLC25A16P16260 332 aa19.43■□□□□ 0.7
TDP1-206ENST00000553569 LIPAP38571 399 aa19.43■□□□□ 0.7
TDP1-206ENST00000553569 GK2Q14410 553 aaPredicted RBP19.43■□□□□ 0.7
TDP1-206ENST00000553569 GLYATL3Q5SZD4 288 aa19.43■□□□□ 0.7
TDP1-206ENST00000553569 MRPL21Q7Z2W9 205 aaKnown RBP19.43■□□□□ 0.7
TDP1-206ENST00000553569 HIST2H2ABQ8IUE6 130 aaPredicted RBP19.43■□□□□ 0.7
TDP1-206ENST00000553569 ZNF786Q8N393 782 aa19.43■□□□□ 0.7
TDP1-206ENST00000553569 GALNT4Q8N4A0 578 aa19.43■□□□□ 0.7
TDP1-206ENST00000553569 BHLHE23Q8NDY6 225 aa19.43■□□□□ 0.7
TDP1-206ENST00000553569 OR2AE1Q8NHA4 323 aa19.43■□□□□ 0.7
TDP1-206ENST00000553569 UBE2FQ969M7 185 aa19.43■□□□□ 0.7
TDP1-206ENST00000553569 ZNF582Q96NG8 517 aaPredicted RBP19.43■□□□□ 0.7
TDP1-206ENST00000553569 BRD7Q9NPI1 651 aa19.43■□□□□ 0.7
TDP1-206ENST00000553569 DECR2Q9NUI1 292 aa19.43■□□□□ 0.7
TDP1-206ENST00000553569 COPS3Q9UNS2 423 aa19.43■□□□□ 0.7
TDP1-206ENST00000553569 PSMD9O00233 223 aa19.42■□□□□ 0.7
TDP1-206ENST00000553569 TBX1O43435 398 aa19.42■□□□□ 0.7
TDP1-206ENST00000553569 ALOX5APP20292 161 aa19.42■□□□□ 0.7
TDP1-206ENST00000553569 PEX2P28328 305 aa19.42■□□□□ 0.7
TDP1-206ENST00000553569 ZNF121P58317 390 aaPredicted RBP19.42■□□□□ 0.7
TDP1-206ENST00000553569 LPCAT4Q643R3 524 aa19.42■□□□□ 0.7
TDP1-206ENST00000553569 SLC35F2Q8IXU6 374 aa19.42■□□□□ 0.7
TDP1-206ENST00000553569 OR51G2Q8NGK0 314 aa19.42■□□□□ 0.7
TDP1-206ENST00000553569 GSX1Q9H4S2 264 aaPredicted RBP19.42■□□□□ 0.7
TDP1-206ENST00000553569 SAP30LQ9HAJ7 183 aa19.42■□□□□ 0.7
TDP1-206ENST00000553569 ADGRL4Q9HBW9 690 aa19.42■□□□□ 0.7
TDP1-206ENST00000553569 NKIRAS2Q9NYR9 191 aa19.42■□□□□ 0.7
TDP1-206ENST00000553569 WARS2Q9UGM6 360 aaKnown RBP19.42■□□□□ 0.7
TDP1-206ENST00000553569 E9PQ18 207 aa19.41■□□□□ 0.7
TDP1-206ENST00000553569 NDUFS8O00217 210 aa19.41■□□□□ 0.7
TDP1-206ENST00000553569 CDC14BO60729 498 aa19.41■□□□□ 0.7
TDP1-206ENST00000553569 APOL3O95236 402 aa19.41■□□□□ 0.7
TDP1-206ENST00000553569 COL8A2P25067 703 aa19.41■□□□□ 0.7
TDP1-206ENST00000553569 HTR1FP30939 366 aa19.41■□□□□ 0.7
TDP1-206ENST00000553569 ZNF92Q03936 586 aa19.41■□□□□ 0.7
TDP1-206ENST00000553569 FAM209AQ5JX71 171 aa19.41■□□□□ 0.7
TDP1-206ENST00000553569 Q6ZR03 302 aa19.41■□□□□ 0.7
TDP1-206ENST00000553569 USP51Q70EK9 711 aa19.41■□□□□ 0.7
TDP1-206ENST00000553569 FAM57BQ71RH2 274 aa19.41■□□□□ 0.7
TDP1-206ENST00000553569 PGAP1Q75T13 922 aa19.41■□□□□ 0.7
TDP1-206ENST00000553569 KRT77Q7Z794 578 aa19.41■□□□□ 0.7
TDP1-206ENST00000553569 RFLNBQ8N5W9 214 aa19.41■□□□□ 0.7
TDP1-206ENST00000553569 OR2Z1Q8NG97 314 aa19.41■□□□□ 0.7
TDP1-206ENST00000553569 RDH5Q92781 318 aa19.41■□□□□ 0.7
TDP1-206ENST00000553569 YIPF5Q969M3 257 aa19.41■□□□□ 0.7
TDP1-206ENST00000553569 BPESC1Q9GZL8 116 aa19.41■□□□□ 0.7
TDP1-206ENST00000553569 LRP12Q9Y561 859 aa19.41■□□□□ 0.7
TDP1-206ENST00000553569 TMEM14AQ9Y6G1 99 aa19.41■□□□□ 0.7
TDP1-206ENST00000553569 APOC1P02654 83 aa19.4■□□□□ 0.7
TDP1-206ENST00000553569 SELEP16581 610 aa19.4■□□□□ 0.7
TDP1-206ENST00000553569 NR4A2P43354 598 aa19.4■□□□□ 0.7
TDP1-206ENST00000553569 ELF3P78545 371 aaPredicted RBP19.4■□□□□ 0.7
TDP1-206ENST00000553569 KCTD18Q6PI47 426 aaPredicted RBP19.4■□□□□ 0.7
TDP1-206ENST00000553569 RHOUQ7L0Q8 258 aa19.4■□□□□ 0.7
TDP1-206ENST00000553569 BIVMQ86UB2 503 aa19.4■□□□□ 0.7
TDP1-206ENST00000553569 TRUB1Q8WWH5 349 aaKnown RBP19.4■□□□□ 0.7
TDP1-206ENST00000553569 ELMOD3Q96FG2 381 aa19.4■□□□□ 0.7
TDP1-206ENST00000553569 SMPD3Q9NY59 655 aaPredicted RBP19.4■□□□□ 0.7
TDP1-206ENST00000553569 ZDHHC8Q9ULC8 765 aa19.4■□□□□ 0.7
TDP1-206ENST00000553569 TEP1Q99973 2627 aaKnown RBP19.4■□□□□ 0.7
TDP1-206ENST00000553569 A0A096LNT2 108 aa19.39■□□□□ 0.69
TDP1-206ENST00000553569 IQCF6A8MYZ5 107 aa19.39■□□□□ 0.69
TDP1-206ENST00000553569 PRR32B1ATL7 298 aa19.39■□□□□ 0.69
TDP1-206ENST00000553569 VWC2LB2RUY7 222 aa19.39■□□□□ 0.69
TDP1-206ENST00000553569 LILRA1O75019 489 aa19.39■□□□□ 0.69
TDP1-206ENST00000553569 SBK2P0C263 348 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms