RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 SPATA24Q86W54 205 aa9.94□□□□□ -0.82
SRP54-203ENST00000553544 NPEPL1Q8NDH3 523 aa9.94□□□□□ -0.82
SRP54-203ENST00000553544 GJC3Q8NFK1 279 aa9.94□□□□□ -0.82
SRP54-203ENST00000553544 OR4K13Q8NH42 304 aa9.94□□□□□ -0.82
SRP54-203ENST00000553544 SLC7A6OSQ96CW6 309 aaPredicted RBP9.94□□□□□ -0.82
SRP54-203ENST00000553544 ZNF48Q96MX3 618 aaPredicted RBP9.94□□□□□ -0.82
SRP54-203ENST00000553544 DCLRE1CQ96SD1 692 aaKnown RBP9.94□□□□□ -0.82
SRP54-203ENST00000553544 MRI1Q9BV20 369 aa9.94□□□□□ -0.82
SRP54-203ENST00000553544 CDH10Q9Y6N8 788 aa9.94□□□□□ -0.82
SRP54-203ENST00000553544 WNK1Q9H4A3 2382 aa9.94□□□□□ -0.82
SRP54-203ENST00000553544 TRAPPC2LH3BP13 241 aa9.93□□□□□ -0.82
SRP54-203ENST00000553544 J3QW42 95 aa9.93□□□□□ -0.82
SRP54-203ENST00000553544 GNGT2O14610 69 aa9.93□□□□□ -0.82
SRP54-203ENST00000553544 ACOT8O14734 319 aa9.93□□□□□ -0.82
SRP54-203ENST00000553544 GSC2O15499 205 aa9.93□□□□□ -0.82
SRP54-203ENST00000553544 SPRY3O43610 288 aa9.93□□□□□ -0.82
SRP54-203ENST00000553544 KNG1P01042 644 aa9.93□□□□□ -0.82
SRP54-203ENST00000553544 DBHP09172 617 aa9.93□□□□□ -0.82
SRP54-203ENST00000553544 OMGP23515 440 aa9.93□□□□□ -0.82
SRP54-203ENST00000553544 NOS3P29474 1203 aa9.93□□□□□ -0.82
SRP54-203ENST00000553544 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.93□□□□□ -0.82
SRP54-203ENST00000553544 PPP1R8Q12972 351 aaKnown RBP9.93□□□□□ -0.82
SRP54-203ENST00000553544 CDK5R2Q13319 367 aa9.93□□□□□ -0.82
SRP54-203ENST00000553544 KRTAP27-1Q3LI81 207 aa9.93□□□□□ -0.82
SRP54-203ENST00000553544 HIST2H2BDQ6DRA6 164 aa9.93□□□□□ -0.82
SRP54-203ENST00000553544 OR2T5Q6IEZ7 315 aa9.93□□□□□ -0.82
SRP54-203ENST00000553544 C10orf67Q8IYJ2 551 aa9.93□□□□□ -0.82
SRP54-203ENST00000553544 SDR9C7Q8NEX9 313 aa9.93□□□□□ -0.82
SRP54-203ENST00000553544 OR52L1Q8NGH7 329 aa9.93□□□□□ -0.82
SRP54-203ENST00000553544 OR52E2Q8NGJ4 325 aa9.93□□□□□ -0.82
SRP54-203ENST00000553544 OR8D4Q8NGM9 314 aa9.93□□□□□ -0.82
SRP54-203ENST00000553544 OR2T29Q8NH02 315 aa9.93□□□□□ -0.82
SRP54-203ENST00000553544 TAF15Q92804 592 aaKnown RBP eCLIP9.93□□□□□ -0.82
SRP54-203ENST00000553544 PTP4A1Q93096 173 aa9.93□□□□□ -0.82
SRP54-203ENST00000553544 HAVCR1Q96D42 359 aa9.93□□□□□ -0.82
SRP54-203ENST00000553544 CLPTM1LQ96KA5 538 aa9.93□□□□□ -0.82
SRP54-203ENST00000553544 COG8Q96MW5 612 aa9.93□□□□□ -0.82
SRP54-203ENST00000553544 DIRC2Q96SL1 478 aa9.93□□□□□ -0.82
SRP54-203ENST00000553544 COQ7Q99807 217 aa9.93□□□□□ -0.82
SRP54-203ENST00000553544 HDHD2Q9H0R4 259 aa9.93□□□□□ -0.82
SRP54-203ENST00000553544 BEX1Q9HBH7 125 aa9.93□□□□□ -0.82
SRP54-203ENST00000553544 MSL2Q9HCI7 577 aa9.93□□□□□ -0.82
SRP54-203ENST00000553544 RPRD1BQ9NQG5 326 aaKnown RBP9.93□□□□□ -0.82
SRP54-203ENST00000553544 VNN3Q9NY84 501 aa9.93□□□□□ -0.82
SRP54-203ENST00000553544 PDP1Q9P0J1 537 aaPredicted RBP9.93□□□□□ -0.82
SRP54-203ENST00000553544 POLR3KQ9Y2Y1 108 aaPredicted RBP9.93□□□□□ -0.82
SRP54-203ENST00000553544 SAMHD1Q9Y3Z3 626 aaKnown RBP9.93□□□□□ -0.82
SRP54-203ENST00000553544 CMYA5Q8N3K9 4069 aa9.92□□□□□ -0.82
SRP54-203ENST00000553544 DOCK11Q5JSL3 2073 aa9.92□□□□□ -0.82
SRP54-203ENST00000553544 M0QZ24 198 aa9.92□□□□□ -0.82
SRP54-203ENST00000553544 CCNB2O95067 398 aa9.92□□□□□ -0.82
SRP54-203ENST00000553544 CRYBA1P05813 215 aa9.92□□□□□ -0.82
SRP54-203ENST00000553544 ZNF12P17014 697 aa9.92□□□□□ -0.82
SRP54-203ENST00000553544 GSTM3P21266 225 aa9.92□□□□□ -0.82
SRP54-203ENST00000553544 GGT2P36268 569 aa9.92□□□□□ -0.82
SRP54-203ENST00000553544 CENPAP49450 140 aa9.92□□□□□ -0.82
SRP54-203ENST00000553544 RGS6P49758 472 aa9.92□□□□□ -0.82
SRP54-203ENST00000553544 MICAQ29983 383 aa9.92□□□□□ -0.82
SRP54-203ENST00000553544 SLC36A3Q495N2 470 aa9.92□□□□□ -0.82
SRP54-203ENST00000553544 SPRNQ5BIV9 151 aa9.92□□□□□ -0.82
SRP54-203ENST00000553544 ZMAT1Q5H9K5 638 aa9.92□□□□□ -0.82
SRP54-203ENST00000553544 CLEC12AQ5QGZ9 265 aa9.92□□□□□ -0.82
SRP54-203ENST00000553544 SLC35F1Q5T1Q4 408 aa9.92□□□□□ -0.82
SRP54-203ENST00000553544 C1orf146Q5VVC0 180 aa9.92□□□□□ -0.82
SRP54-203ENST00000553544 SLC18B1Q6NT16 456 aa9.92□□□□□ -0.82
SRP54-203ENST00000553544 CORO6Q6QEF8 472 aa9.92□□□□□ -0.82
SRP54-203ENST00000553544 FBXW12Q6X9E4 464 aa9.92□□□□□ -0.82
SRP54-203ENST00000553544 CFAP77Q6ZQR2 320 aa9.92□□□□□ -0.82
SRP54-203ENST00000553544 Q6ZR03 302 aa9.92□□□□□ -0.82
SRP54-203ENST00000553544 COLCA1Q6ZS62 124 aa9.92□□□□□ -0.82
SRP54-203ENST00000553544 SPATC1Q76KD6 591 aa9.92□□□□□ -0.82
SRP54-203ENST00000553544 LNX2Q8N448 690 aa9.92□□□□□ -0.82
SRP54-203ENST00000553544 KLHL36Q8N4N3 616 aa9.92□□□□□ -0.82
SRP54-203ENST00000553544 AQP11Q8NBQ7 271 aa9.92□□□□□ -0.82
SRP54-203ENST00000553544 CMBLQ96DG6 245 aa9.92□□□□□ -0.82
SRP54-203ENST00000553544 PKP2Q99959 881 aa9.92□□□□□ -0.82
SRP54-203ENST00000553544 DGCR6LQ9BY27 220 aa9.92□□□□□ -0.82
SRP54-203ENST00000553544 MMP27Q9H306 513 aa9.92□□□□□ -0.82
SRP54-203ENST00000553544 FN3KQ9H479 309 aa9.92□□□□□ -0.82
SRP54-203ENST00000553544 PNRC2Q9NPJ4 139 aaKnown RBP9.92□□□□□ -0.82
SRP54-203ENST00000553544 MRPL22Q9NWU5 206 aaKnown RBP9.92□□□□□ -0.82
SRP54-203ENST00000553544 CYB5R1Q9UHQ9 305 aa9.92□□□□□ -0.82
SRP54-203ENST00000553544 POMPQ9Y244 141 aa9.92□□□□□ -0.82
SRP54-203ENST00000553544 POLR1DQ9Y2S0 133 aa9.92□□□□□ -0.82
SRP54-203ENST00000553544 INSIG2Q9Y5U4 225 aa9.92□□□□□ -0.82
SRP54-203ENST00000553544 NPTNQ9Y639 398 aa9.92□□□□□ -0.82
SRP54-203ENST00000553544 NBEAL2Q6ZNJ1 2754 aa9.91□□□□□ -0.82
SRP54-203ENST00000553544 ARRDC5A6NEK1 342 aa9.91□□□□□ -0.82
SRP54-203ENST00000553544 TIMM23O14925 209 aa9.91□□□□□ -0.82
SRP54-203ENST00000553544 TIMM8AO60220 97 aaPredicted RBP9.91□□□□□ -0.82
SRP54-203ENST00000553544 E2F6O75461 281 aa9.91□□□□□ -0.82
SRP54-203ENST00000553544 CST1P01037 141 aa9.91□□□□□ -0.82
SRP54-203ENST00000553544 FCGR1AP12314 374 aa9.91□□□□□ -0.82
SRP54-203ENST00000553544 RAC2P15153 192 aa9.91□□□□□ -0.82
SRP54-203ENST00000553544 SLC6A9P48067 706 aa9.91□□□□□ -0.82
SRP54-203ENST00000553544 ERFP50548 548 aa9.91□□□□□ -0.82
SRP54-203ENST00000553544 SRSF4Q08170 494 aaKnown RBP9.91□□□□□ -0.82
SRP54-203ENST00000553544 CD300LDQ6UXZ3 194 aa9.91□□□□□ -0.82
SRP54-203ENST00000553544 ADGRG5Q8IZF4 528 aa9.91□□□□□ -0.82
SRP54-203ENST00000553544 SPICQ8N5J4 248 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms