RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 ZNF92Q03936 586 aa15.32■□□□□ 0.04
SHMT2-206ENST00000553529 MAB21L1Q13394 359 aa15.32■□□□□ 0.04
SHMT2-206ENST00000553529 GLYATL3Q5SZD4 288 aa15.32■□□□□ 0.04
SHMT2-206ENST00000553529 OR6K6Q8NGW6 343 aa15.32■□□□□ 0.04
SHMT2-206ENST00000553529 BCAS4Q8TDM0 211 aa15.32■□□□□ 0.04
SHMT2-206ENST00000553529 TIMD4Q96H15 378 aa15.32■□□□□ 0.04
SHMT2-206ENST00000553529 LRGUKQ96M69 825 aa15.32■□□□□ 0.04
SHMT2-206ENST00000553529 SLC30A2Q9BRI3 323 aa15.32■□□□□ 0.04
SHMT2-206ENST00000553529 DGCR6LQ9BY27 220 aa15.32■□□□□ 0.04
SHMT2-206ENST00000553529 MUC13Q9H3R2 512 aa15.32■□□□□ 0.04
SHMT2-206ENST00000553529 OCEL1Q9H607 264 aa15.32■□□□□ 0.04
SHMT2-206ENST00000553529 CGGBP1Q9UFW8 167 aaPredicted RBP15.32■□□□□ 0.04
SHMT2-206ENST00000553529 ATPIF1Q9UII2 106 aa15.32■□□□□ 0.04
SHMT2-206ENST00000553529 PPP1R3CQ9UQK1 317 aa15.32■□□□□ 0.04
SHMT2-206ENST00000553529 IQCF6A8MYZ5 107 aa15.31■□□□□ 0.04
SHMT2-206ENST00000553529 TRAPPC2LH3BP13 241 aa15.31■□□□□ 0.04
SHMT2-206ENST00000553529 TMEM178BH3BS89 294 aa15.31■□□□□ 0.04
SHMT2-206ENST00000553529 M0R135 149 aa15.31■□□□□ 0.04
SHMT2-206ENST00000553529 ZNF823P16415 610 aa15.31■□□□□ 0.04
SHMT2-206ENST00000553529 LIPAP38571 399 aa15.31■□□□□ 0.04
SHMT2-206ENST00000553529 SLC6A9P48067 706 aa15.31■□□□□ 0.04
SHMT2-206ENST00000553529 BTG1P62324 171 aa15.31■□□□□ 0.04
SHMT2-206ENST00000553529 MPPED2Q15777 294 aa15.31■□□□□ 0.04
SHMT2-206ENST00000553529 ZMAT1Q5H9K5 638 aa15.31■□□□□ 0.04
SHMT2-206ENST00000553529 TMEM236Q5W0B7 351 aa15.31■□□□□ 0.04
SHMT2-206ENST00000553529 PGM2L1Q6PCE3 622 aa15.31■□□□□ 0.04
SHMT2-206ENST00000553529 C1orf174Q8IYL3 243 aa15.31■□□□□ 0.04
SHMT2-206ENST00000553529 ARHGAP24Q8N264 748 aa15.31■□□□□ 0.04
SHMT2-206ENST00000553529 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.31■□□□□ 0.04
SHMT2-206ENST00000553529 GIPC3Q8TF64 312 aa15.31■□□□□ 0.04
SHMT2-206ENST00000553529 OTULINQ96BN8 352 aa15.31■□□□□ 0.04
SHMT2-206ENST00000553529 ZNF799Q96GE5 643 aa15.31■□□□□ 0.04
SHMT2-206ENST00000553529 ZNF582Q96NG8 517 aaPredicted RBP15.31■□□□□ 0.04
SHMT2-206ENST00000553529 DIRC2Q96SL1 478 aa15.31■□□□□ 0.04
SHMT2-206ENST00000553529 CENPMQ9NSP4 180 aa15.31■□□□□ 0.04
SHMT2-206ENST00000553529 PDP1Q9P0J1 537 aaPredicted RBP15.31■□□□□ 0.04
SHMT2-206ENST00000553529 IL19Q9UHD0 177 aa15.31■□□□□ 0.04
SHMT2-206ENST00000553529 KCNG2Q9UJ96 466 aa15.31■□□□□ 0.04
SHMT2-206ENST00000553529 SOX21Q9Y651 276 aaPredicted RBP15.31■□□□□ 0.04
SHMT2-206ENST00000553529 TRAV20A0A0B4J274 112 aa15.3■□□□□ 0.04
SHMT2-206ENST00000553529 DHRS12A0PJE2 317 aa15.3■□□□□ 0.04
SHMT2-206ENST00000553529 ZNF593O00488 134 aaPredicted RBP15.3■□□□□ 0.04
SHMT2-206ENST00000553529 POU1F1P28069 291 aa15.3■□□□□ 0.04
SHMT2-206ENST00000553529 RGS6P49758 472 aa15.3■□□□□ 0.04
SHMT2-206ENST00000553529 RPL13AP3Q6NVV1 102 aa15.3■□□□□ 0.04
SHMT2-206ENST00000553529 SPATA24Q86W54 205 aa15.3■□□□□ 0.04
SHMT2-206ENST00000553529 BBS1Q8NFJ9 593 aa15.3■□□□□ 0.04
SHMT2-206ENST00000553529 OR2T33Q8NG76 320 aa15.3■□□□□ 0.04
SHMT2-206ENST00000553529 OR2T4Q8NH00 348 aa15.3■□□□□ 0.04
SHMT2-206ENST00000553529 ST7LQ8TDW4 575 aa15.3■□□□□ 0.04
SHMT2-206ENST00000553529 RAB39BQ96DA2 213 aa15.3■□□□□ 0.04
SHMT2-206ENST00000553529 SLAMF6Q96DU3 332 aa15.3■□□□□ 0.04
SHMT2-206ENST00000553529 C1orf21Q9H246 121 aa15.3■□□□□ 0.04
SHMT2-206ENST00000553529 DDX28Q9NUL7 540 aaKnown RBP15.3■□□□□ 0.04
SHMT2-206ENST00000553529 UFSP2Q9NUQ7 469 aa15.3■□□□□ 0.04
SHMT2-206ENST00000553529 KLHDC2Q9Y2U9 406 aa15.3■□□□□ 0.04
SHMT2-206ENST00000553529 H3BN98 237 aa15.29■□□□□ 0.04
SHMT2-206ENST00000553529 CA6P23280 308 aa15.29■□□□□ 0.04
SHMT2-206ENST00000553529 ENTPD1P49961 510 aa15.29■□□□□ 0.04
SHMT2-206ENST00000553529 OR5L1Q8NGL2 311 aa15.29■□□□□ 0.04
SHMT2-206ENST00000553529 COPS4Q9BT78 406 aa15.29■□□□□ 0.04
SHMT2-206ENST00000553529 ZNF319Q9P2F9 582 aa15.29■□□□□ 0.04
SHMT2-206ENST00000553529 CEACAM18A8MTB9 384 aa15.28■□□□□ 0.04
SHMT2-206ENST00000553529 M0R129 80 aa15.28■□□□□ 0.04
SHMT2-206ENST00000553529 GYG2O15488 501 aa15.28■□□□□ 0.04
SHMT2-206ENST00000553529 TCF21O43680 179 aa15.28■□□□□ 0.04
SHMT2-206ENST00000553529 SELENOFO60613 162 aa15.28■□□□□ 0.04
SHMT2-206ENST00000553529 TNFRSF1AP19438 455 aa15.28■□□□□ 0.04
SHMT2-206ENST00000553529 TNFSF4P23510 183 aa15.28■□□□□ 0.04
SHMT2-206ENST00000553529 OTX1P32242 354 aaPredicted RBP15.28■□□□□ 0.04
SHMT2-206ENST00000553529 SLC25A1P53007 311 aa15.28■□□□□ 0.04
SHMT2-206ENST00000553529 ELF3P78545 371 aaPredicted RBP15.28■□□□□ 0.04
SHMT2-206ENST00000553529 EIF2B1Q14232 305 aaKnown RBP15.28■□□□□ 0.04
SHMT2-206ENST00000553529 FLOT2Q14254 428 aa15.28■□□□□ 0.04
SHMT2-206ENST00000553529 DCAF12L2Q5VW00 463 aa15.28■□□□□ 0.04
SHMT2-206ENST00000553529 SHQ1Q6PI26 577 aaKnown RBP15.28■□□□□ 0.04
SHMT2-206ENST00000553529 LYPD2Q6UXB3 125 aa15.28■□□□□ 0.04
SHMT2-206ENST00000553529 LRRC28Q86X40 367 aaPredicted RBP15.28■□□□□ 0.04
SHMT2-206ENST00000553529 ERI1Q8IV48 349 aaKnown RBP15.28■□□□□ 0.04
SHMT2-206ENST00000553529 LINC00471Q8N535 108 aa15.28■□□□□ 0.04
SHMT2-206ENST00000553529 DEFB108BQ8NET1 73 aa15.28■□□□□ 0.04
SHMT2-206ENST00000553529 SEMA6DQ8NFY4 1073 aa15.28■□□□□ 0.04
SHMT2-206ENST00000553529 OR13G1Q8NGZ3 307 aa15.28■□□□□ 0.04
SHMT2-206ENST00000553529 TEX47Q8TBZ9 253 aa15.28■□□□□ 0.04
SHMT2-206ENST00000553529 ZMYND19Q96E35 227 aaPredicted RBP15.28■□□□□ 0.04
SHMT2-206ENST00000553529 SLC6A7Q99884 636 aa15.28■□□□□ 0.04
SHMT2-206ENST00000553529 CADM1Q9BY67 442 aaKnown RBP15.28■□□□□ 0.04
SHMT2-206ENST00000553529 OR51V1Q9H2C8 321 aa15.28■□□□□ 0.04
SHMT2-206ENST00000553529 NTN4Q9HB63 628 aa15.28■□□□□ 0.04
SHMT2-206ENST00000553529 PATZ1Q9HBE1 687 aaKnown RBP15.28■□□□□ 0.04
SHMT2-206ENST00000553529 CMC2Q9NRP2 79 aa15.28■□□□□ 0.04
SHMT2-206ENST00000553529 DNAJC27Q9NZQ0 273 aa15.28■□□□□ 0.04
SHMT2-206ENST00000553529 METRNQ9UJH8 293 aa15.28■□□□□ 0.04
SHMT2-206ENST00000553529 POMPQ9Y244 141 aa15.28■□□□□ 0.04
SHMT2-206ENST00000553529 IGHV3OR16-10A0A075B7F0 116 aa15.27■□□□□ 0.04
SHMT2-206ENST00000553529 F5H0A9 414 aaPredicted RBP15.27■□□□□ 0.04
SHMT2-206ENST00000553529 FAM20BO75063 409 aa15.27■□□□□ 0.04
SHMT2-206ENST00000553529 FKBP6O75344 327 aa15.27■□□□□ 0.04
SHMT2-206ENST00000553529 TIPRLO75663 272 aa15.27■□□□□ 0.04
SHMT2-206ENST00000553529 EPHA1P21709 976 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms