RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 GSSP48637 474 aa10.7□□□□□ -0.7
LINC00643-202ENST00000553426 MNAT1P51948 309 aa10.7□□□□□ -0.7
LINC00643-202ENST00000553426 UBA52P62987 128 aaKnown RBP10.7□□□□□ -0.7
LINC00643-202ENST00000553426 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.7□□□□□ -0.7
LINC00643-202ENST00000553426 FOXL1Q12952 345 aa10.7□□□□□ -0.7
LINC00643-202ENST00000553426 HNRNPA0Q13151 305 aaKnown RBP10.7□□□□□ -0.7
LINC00643-202ENST00000553426 GK2Q14410 553 aaPredicted RBP10.7□□□□□ -0.7
LINC00643-202ENST00000553426 CLEC12AQ5QGZ9 265 aa10.7□□□□□ -0.7
LINC00643-202ENST00000553426 SLC35F1Q5T1Q4 408 aa10.7□□□□□ -0.7
LINC00643-202ENST00000553426 ZNF620Q6ZNG0 422 aa10.7□□□□□ -0.7
LINC00643-202ENST00000553426 CFAP77Q6ZQR2 320 aa10.7□□□□□ -0.7
LINC00643-202ENST00000553426 COLCA1Q6ZS62 124 aa10.7□□□□□ -0.7
LINC00643-202ENST00000553426 DOK3Q7L591 496 aa10.7□□□□□ -0.7
LINC00643-202ENST00000553426 MRPL21Q7Z2W9 205 aaKnown RBP10.7□□□□□ -0.7
LINC00643-202ENST00000553426 ZDHHC21Q8IVQ6 265 aa10.7□□□□□ -0.7
LINC00643-202ENST00000553426 CELF2-AS1Q8N7Q2 184 aa10.7□□□□□ -0.7
LINC00643-202ENST00000553426 SIGLECL1Q8N7X8 197 aa10.7□□□□□ -0.7
LINC00643-202ENST00000553426 ZDHHC22Q8N966 263 aa10.7□□□□□ -0.7
LINC00643-202ENST00000553426 OR8B3Q8NGG8 313 aa10.7□□□□□ -0.7
LINC00643-202ENST00000553426 OR4C15Q8NGM1 316 aa10.7□□□□□ -0.7
LINC00643-202ENST00000553426 OR2T4Q8NH00 348 aa10.7□□□□□ -0.7
LINC00643-202ENST00000553426 DVL3Q92997 716 aaPredicted RBP10.7□□□□□ -0.7
LINC00643-202ENST00000553426 SLCO4A1Q96BD0 722 aa10.7□□□□□ -0.7
LINC00643-202ENST00000553426 NEIL1Q96FI4 390 aaPredicted RBP10.7□□□□□ -0.7
LINC00643-202ENST00000553426 OR8B2Q96RD0 313 aa10.7□□□□□ -0.7
LINC00643-202ENST00000553426 TMEM165Q9HC07 324 aa10.7□□□□□ -0.7
LINC00643-202ENST00000553426 TAGLN3Q9UI15 199 aa10.7□□□□□ -0.7
LINC00643-202ENST00000553426 ARHGAP32A7KAX9 2087 aa10.7□□□□□ -0.7
LINC00643-202ENST00000553426 IGHV3-64DA0A0J9YX35 117 aa10.69□□□□□ -0.7
LINC00643-202ENST00000553426 M0R135 149 aa10.69□□□□□ -0.7
LINC00643-202ENST00000553426 MLNRO43193 412 aa10.69□□□□□ -0.7
LINC00643-202ENST00000553426 DCTN3O75935 186 aa10.69□□□□□ -0.7
LINC00643-202ENST00000553426 ZNF205O95201 554 aa10.69□□□□□ -0.7
LINC00643-202ENST00000553426 HLA-DPB1P04440 258 aa10.69□□□□□ -0.7
LINC00643-202ENST00000553426 PPIAL4GP0DN37 164 aa10.69□□□□□ -0.7
LINC00643-202ENST00000553426 PRTN3P24158 256 aa10.69□□□□□ -0.7
LINC00643-202ENST00000553426 GGT2P36268 569 aa10.69□□□□□ -0.7
LINC00643-202ENST00000553426 GATA4P43694 442 aa10.69□□□□□ -0.7
LINC00643-202ENST00000553426 MTNR1AP48039 350 aa10.69□□□□□ -0.7
LINC00643-202ENST00000553426 PAX8Q06710 450 aa10.69□□□□□ -0.7
LINC00643-202ENST00000553426 BAMBIQ13145 260 aa10.69□□□□□ -0.7
LINC00643-202ENST00000553426 KCNJ8Q15842 424 aa10.69□□□□□ -0.7
LINC00643-202ENST00000553426 PGBD2Q6P3X8 592 aa10.69□□□□□ -0.7
LINC00643-202ENST00000553426 KLBQ86Z14 1044 aa10.69□□□□□ -0.7
LINC00643-202ENST00000553426 DEFB107AQ8IZN7 70 aa10.69□□□□□ -0.7
LINC00643-202ENST00000553426 ZNF799Q96GE5 643 aa10.69□□□□□ -0.7
LINC00643-202ENST00000553426 TMEM246Q9BRR3 403 aa10.69□□□□□ -0.7
LINC00643-202ENST00000553426 FN3KQ9H479 309 aa10.69□□□□□ -0.7
LINC00643-202ENST00000553426 ESM1Q9NQ30 184 aa10.69□□□□□ -0.7
LINC00643-202ENST00000553426 CLN8Q9UBY8 286 aa10.69□□□□□ -0.7
LINC00643-202ENST00000553426 ZNF69Q9UC07 566 aa10.69□□□□□ -0.7
LINC00643-202ENST00000553426 CD300AQ9UGN4 299 aa10.69□□□□□ -0.7
LINC00643-202ENST00000553426 CDH10Q9Y6N8 788 aa10.69□□□□□ -0.7
LINC00643-202ENST00000553426 TNFRSF11BO00300 401 aa10.68□□□□□ -0.7
LINC00643-202ENST00000553426 CD80P33681 288 aa10.68□□□□□ -0.7
LINC00643-202ENST00000553426 RBMXP38159 391 aaKnown RBP10.68□□□□□ -0.7
LINC00643-202ENST00000553426 PITPNBP48739 271 aa10.68□□□□□ -0.7
LINC00643-202ENST00000553426 MZT1Q08AG7 82 aa10.68□□□□□ -0.7
LINC00643-202ENST00000553426 TAF13Q15543 124 aa10.68□□□□□ -0.7
LINC00643-202ENST00000553426 OR8G1Q15617 311 aa10.68□□□□□ -0.7
LINC00643-202ENST00000553426 RSPO1Q2MKA7 263 aaPredicted RBP10.68□□□□□ -0.7
LINC00643-202ENST00000553426 KRTAP27-1Q3LI81 207 aa10.68□□□□□ -0.7
LINC00643-202ENST00000553426 ZNF404Q494X3 552 aa10.68□□□□□ -0.7
LINC00643-202ENST00000553426 AWAT1Q58HT5 328 aa10.68□□□□□ -0.7
LINC00643-202ENST00000553426 DCDC5Q6ZRR9 648 aa10.68□□□□□ -0.7
LINC00643-202ENST00000553426 RAB40AQ8WXH6 277 aa10.68□□□□□ -0.7
LINC00643-202ENST00000553426 SLC25A28Q96A46 364 aa10.68□□□□□ -0.7
LINC00643-202ENST00000553426 EGLN3Q9H6Z9 239 aa10.68□□□□□ -0.7
LINC00643-202ENST00000553426 FN3KRPQ9HA64 309 aa10.68□□□□□ -0.7
LINC00643-202ENST00000553426 KIF17Q9P2E2 1029 aa10.68□□□□□ -0.7
LINC00643-202ENST00000553426 ARL2BPQ9Y2Y0 163 aa10.68□□□□□ -0.7
LINC00643-202ENST00000553426 IGHV2-70DA0A0C4DH43 119 aa10.67□□□□□ -0.7
LINC00643-202ENST00000553426 A0A1B0GWJ7 208 aa10.67□□□□□ -0.7
LINC00643-202ENST00000553426 GGT3PA6NGU5 568 aa10.67□□□□□ -0.7
LINC00643-202ENST00000553426 PHYHO14832 338 aa10.67□□□□□ -0.7
LINC00643-202ENST00000553426 SPRY1O43609 319 aaPredicted RBP10.67□□□□□ -0.7
LINC00643-202ENST00000553426 GMDSO60547 372 aa10.67□□□□□ -0.7
LINC00643-202ENST00000553426 HKR1P10072 659 aa10.67□□□□□ -0.7
LINC00643-202ENST00000553426 FMO3P31513 532 aa10.67□□□□□ -0.7
LINC00643-202ENST00000553426 PYCR1P32322 319 aa10.67□□□□□ -0.7
LINC00643-202ENST00000553426 CD200P41217 278 aa10.67□□□□□ -0.7
LINC00643-202ENST00000553426 HMGA2P52926 109 aa10.67□□□□□ -0.7
LINC00643-202ENST00000553426 DRAM2Q6UX65 266 aa10.67□□□□□ -0.7
LINC00643-202ENST00000553426 NAA40Q86UY6 237 aa10.67□□□□□ -0.7
LINC00643-202ENST00000553426 PARP8Q8N3A8 854 aa10.67□□□□□ -0.7
LINC00643-202ENST00000553426 SPERTQ8NA61 448 aa10.67□□□□□ -0.7
LINC00643-202ENST00000553426 CYB561A3Q8NBI2 242 aa10.67□□□□□ -0.7
LINC00643-202ENST00000553426 Q8TCH9 128 aa10.67□□□□□ -0.7
LINC00643-202ENST00000553426 MAP6Q96JE9 813 aa10.67□□□□□ -0.7
LINC00643-202ENST00000553426 COPS4Q9BT78 406 aa10.67□□□□□ -0.7
LINC00643-202ENST00000553426 TRIM15Q9C019 465 aa10.67□□□□□ -0.7
LINC00643-202ENST00000553426 PNRC2Q9NPJ4 139 aaKnown RBP10.67□□□□□ -0.7
LINC00643-202ENST00000553426 UFSP2Q9NUQ7 469 aa10.67□□□□□ -0.7
LINC00643-202ENST00000553426 TBC1D23Q9NUY8 699 aa10.67□□□□□ -0.7
LINC00643-202ENST00000553426 MRPL22Q9NWU5 206 aaKnown RBP10.67□□□□□ -0.7
LINC00643-202ENST00000553426 BAIAP2Q9UQB8 552 aa10.67□□□□□ -0.7
LINC00643-202ENST00000553426 LYVE1Q9Y5Y7 322 aa10.67□□□□□ -0.7
LINC00643-202ENST00000553426 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.66□□□□□ -0.7
LINC00643-202ENST00000553426 KIR2DS1A0A191URI9 304 aa10.66□□□□□ -0.7
LINC00643-202ENST00000553426 DNAJC9-AS1A6NH13 148 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms