RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 FAM49BQ9NUQ9 324 aa4.19□□□□□ -1.74
SCFD1-208ENST00000553278 SDHAF2Q9NX18 166 aa4.19□□□□□ -1.74
SCFD1-208ENST00000553278 ZNF107Q9UII5 783 aaPredicted RBP4.19□□□□□ -1.74
SCFD1-208ENST00000553278 CFL2Q9Y281 166 aa4.19□□□□□ -1.74
SCFD1-208ENST00000553278 OR51B2Q9Y5P1 312 aa4.19□□□□□ -1.74
SCFD1-208ENST00000553278 F11RQ9Y624 299 aaKnown RBP4.19□□□□□ -1.74
SCFD1-208ENST00000553278 FAM168BA1KXE4 195 aa4.18□□□□□ -1.74
SCFD1-208ENST00000553278 GJE1A6NN92 205 aa4.18□□□□□ -1.74
SCFD1-208ENST00000553278 F8VP50 259 aa4.18□□□□□ -1.74
SCFD1-208ENST00000553278 H7C417 338 aa4.18□□□□□ -1.74
SCFD1-208ENST00000553278 SNAI2O43623 268 aa4.18□□□□□ -1.74
SCFD1-208ENST00000553278 CBR3O75828 277 aa4.18□□□□□ -1.74
SCFD1-208ENST00000553278 FABP3P05413 133 aa4.18□□□□□ -1.74
SCFD1-208ENST00000553278 ZDHHC11BP0C7U3 371 aa4.18□□□□□ -1.74
SCFD1-208ENST00000553278 ZNF3P17036 446 aa4.18□□□□□ -1.74
SCFD1-208ENST00000553278 CCNE1P24864 410 aa4.18□□□□□ -1.74
SCFD1-208ENST00000553278 CEACAM6P40199 344 aa4.18□□□□□ -1.74
SCFD1-208ENST00000553278 PPICP45877 212 aa4.18□□□□□ -1.74
SCFD1-208ENST00000553278 PRLHRP49683 370 aa4.18□□□□□ -1.74
SCFD1-208ENST00000553278 UBE2KP61086 200 aa4.18□□□□□ -1.74
SCFD1-208ENST00000553278 SKP1P63208 163 aa4.18□□□□□ -1.74
SCFD1-208ENST00000553278 SLC7A9P82251 487 aa4.18□□□□□ -1.74
SCFD1-208ENST00000553278 LCE1AQ5T7P2 110 aa4.18□□□□□ -1.74
SCFD1-208ENST00000553278 ZNF691Q5VV52 312 aa4.18□□□□□ -1.74
SCFD1-208ENST00000553278 THOC7Q6I9Y2 204 aaKnown RBP4.18□□□□□ -1.74
SCFD1-208ENST00000553278 Q6ZTC4 211 aa4.18□□□□□ -1.74
SCFD1-208ENST00000553278 CYP4Z1Q86W10 505 aa4.18□□□□□ -1.74
SCFD1-208ENST00000553278 RAB43Q86YS6 212 aa4.18□□□□□ -1.74
SCFD1-208ENST00000553278 CEND1Q8N111 149 aa4.18□□□□□ -1.74
SCFD1-208ENST00000553278 GPD1LQ8N335 351 aa4.18□□□□□ -1.74
SCFD1-208ENST00000553278 CYB561A3Q8NBI2 242 aa4.18□□□□□ -1.74
SCFD1-208ENST00000553278 TMEM234Q8WY98 164 aa4.18□□□□□ -1.74
SCFD1-208ENST00000553278 ZNF396Q96N95 335 aaPredicted RBP4.18□□□□□ -1.74
SCFD1-208ENST00000553278 ZFP3Q96NJ6 502 aa4.18□□□□□ -1.74
SCFD1-208ENST00000553278 SERPINB11Q96P15 392 aa4.18□□□□□ -1.74
SCFD1-208ENST00000553278 PLEKHF1Q96S99 279 aa4.18□□□□□ -1.74
SCFD1-208ENST00000553278 C6orf50Q9HD87 102 aa4.18□□□□□ -1.74
SCFD1-208ENST00000553278 SLC25A37Q9NYZ2 338 aa4.18□□□□□ -1.74
SCFD1-208ENST00000553278 UVRAGQ9P2Y5 699 aa4.18□□□□□ -1.74
SCFD1-208ENST00000553278 MTFP1Q9UDX5 166 aa4.18□□□□□ -1.74
SCFD1-208ENST00000553278 NUFIP1Q9UHK0 495 aaKnown RBP4.18□□□□□ -1.74
SCFD1-208ENST00000553278 ATP6V1DQ9Y5K8 247 aa4.18□□□□□ -1.74
SCFD1-208ENST00000553278 TSSC4Q9Y5U2 329 aaPredicted RBP4.18□□□□□ -1.74
SCFD1-208ENST00000553278 FHOD3Q2V2M9 1422 aa4.18□□□□□ -1.74
SCFD1-208ENST00000553278 NFASCO94856 1347 aa4.18□□□□□ -1.74
SCFD1-208ENST00000553278 A0A0B4J2E0 115 aa4.17□□□□□ -1.74
SCFD1-208ENST00000553278 hCG_2039718K7EN88 272 aa4.17□□□□□ -1.74
SCFD1-208ENST00000553278 BCL2L11O43521 198 aa4.17□□□□□ -1.74
SCFD1-208ENST00000553278 SCN2BO60939 215 aa4.17□□□□□ -1.74
SCFD1-208ENST00000553278 ZNF30P17039 623 aa4.17□□□□□ -1.74
SCFD1-208ENST00000553278 PGAM1P18669 254 aa4.17□□□□□ -1.74
SCFD1-208ENST00000553278 GNRHRP30968 328 aa4.17□□□□□ -1.74
SCFD1-208ENST00000553278 UGT2B10P36537 528 aa4.17□□□□□ -1.74
SCFD1-208ENST00000553278 RBMXP38159 391 aaKnown RBP4.17□□□□□ -1.74
SCFD1-208ENST00000553278 CDKN2BP42772 138 aa4.17□□□□□ -1.74
SCFD1-208ENST00000553278 P2RX1P51575 399 aa4.17□□□□□ -1.74
SCFD1-208ENST00000553278 DSTNP60981 165 aa4.17□□□□□ -1.74
SCFD1-208ENST00000553278 TSPAN5P62079 268 aa4.17□□□□□ -1.74
SCFD1-208ENST00000553278 C2orf54Q08AI8 447 aa4.17□□□□□ -1.74
SCFD1-208ENST00000553278 DGCR6Q14129 220 aa4.17□□□□□ -1.74
SCFD1-208ENST00000553278 OR2T5Q6IEZ7 315 aa4.17□□□□□ -1.74
SCFD1-208ENST00000553278 SETD3Q86TU7 594 aaPredicted RBP4.17□□□□□ -1.74
SCFD1-208ENST00000553278 DAW1Q8N136 415 aa4.17□□□□□ -1.74
SCFD1-208ENST00000553278 CA13Q8N1Q1 262 aa4.17□□□□□ -1.74
SCFD1-208ENST00000553278 C20orf203Q8NBC4 194 aa4.17□□□□□ -1.74
SCFD1-208ENST00000553278 NPBQ8NG41 125 aa4.17□□□□□ -1.74
SCFD1-208ENST00000553278 OR10AD1Q8NGE0 317 aa4.17□□□□□ -1.74
SCFD1-208ENST00000553278 OR2T29Q8NH02 315 aa4.17□□□□□ -1.74
SCFD1-208ENST00000553278 ACTRT1Q8TDG2 376 aa4.17□□□□□ -1.74
SCFD1-208ENST00000553278 FAM222BQ8WU58 562 aa4.17□□□□□ -1.74
SCFD1-208ENST00000553278 NTAN1Q96AB6 310 aa4.17□□□□□ -1.74
SCFD1-208ENST00000553278 YTHDF1Q9BYJ9 559 aaKnown RBP4.17□□□□□ -1.74
SCFD1-208ENST00000553278 PARP12Q9H0J9 701 aaKnown RBP4.17□□□□□ -1.74
SCFD1-208ENST00000553278 MED4Q9NPJ6 270 aa4.17□□□□□ -1.74
SCFD1-208ENST00000553278 RGS18Q9NS28 235 aa4.17□□□□□ -1.74
SCFD1-208ENST00000553278 ZNF226Q9NYT6 803 aa4.17□□□□□ -1.74
SCFD1-208ENST00000553278 KLF12Q9Y4X4 402 aa4.17□□□□□ -1.74
SCFD1-208ENST00000553278 FADS3Q9Y5Q0 445 aa4.17□□□□□ -1.74
SCFD1-208ENST00000553278 CAMTA1Q9Y6Y1 1673 aa4.16□□□□□ -1.74
SCFD1-208ENST00000553278 LRPPRCP42704 1394 aaKnown RBP4.16□□□□□ -1.74
SCFD1-208ENST00000553278 TOR1AO14656 332 aa4.16□□□□□ -1.74
SCFD1-208ENST00000553278 NPIPB7O75200 414 aa4.16□□□□□ -1.74
SCFD1-208ENST00000553278 PTTG1O95997 202 aa4.16□□□□□ -1.74
SCFD1-208ENST00000553278 MOSP00540 346 aa4.16□□□□□ -1.74
SCFD1-208ENST00000553278 CRISP2P16562 243 aa4.16□□□□□ -1.74
SCFD1-208ENST00000553278 RAB3AP20336 220 aa4.16□□□□□ -1.74
SCFD1-208ENST00000553278 SYT1P21579 422 aa4.16□□□□□ -1.74
SCFD1-208ENST00000553278 MT3P25713 68 aa4.16□□□□□ -1.74
SCFD1-208ENST00000553278 P2RY2P41231 377 aa4.16□□□□□ -1.74
SCFD1-208ENST00000553278 RBM34P42696 430 aaKnown RBP4.16□□□□□ -1.74
SCFD1-208ENST00000553278 CYB561P49447 251 aa4.16□□□□□ -1.74
SCFD1-208ENST00000553278 VEGFCP49767 419 aa4.16□□□□□ -1.74
SCFD1-208ENST00000553278 UBE2E1P51965 193 aa4.16□□□□□ -1.74
SCFD1-208ENST00000553278 ZNF138P52744 262 aa4.16□□□□□ -1.74
SCFD1-208ENST00000553278 HERVK_113P61574 105 aa4.16□□□□□ -1.74
SCFD1-208ENST00000553278 RPS23P62266 143 aaKnown RBP4.16□□□□□ -1.74
SCFD1-208ENST00000553278 PRR3P79522 188 aaKnown RBP4.16□□□□□ -1.74
SCFD1-208ENST00000553278 IGLV3-21P80748 117 aaPredicted RBP4.16□□□□□ -1.74
SCFD1-208ENST00000553278 DYNC1I2Q13409 638 aaKnown RBP4.16□□□□□ -1.74
SCFD1-208ENST00000553278 MAPRE2Q15555 327 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms