RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 CD99P14209 185 aa12.04□□□□□ -0.48
PTCH1-226ENST00000553011 KITLGP21583 273 aa12.04□□□□□ -0.48
PTCH1-226ENST00000553011 HSD11B1P28845 292 aa12.04□□□□□ -0.48
PTCH1-226ENST00000553011 HTR1FP30939 366 aa12.04□□□□□ -0.48
PTCH1-226ENST00000553011 MAGEB1P43366 347 aa12.04□□□□□ -0.48
PTCH1-226ENST00000553011 CX3CR1P49238 355 aa12.04□□□□□ -0.48
PTCH1-226ENST00000553011 CARTPTQ16568 116 aa12.04□□□□□ -0.48
PTCH1-226ENST00000553011 MOGQ16653 247 aa12.04□□□□□ -0.48
PTCH1-226ENST00000553011 SNAI3Q3KNW1 292 aa12.04□□□□□ -0.48
PTCH1-226ENST00000553011 OR2T2Q6IF00 324 aa12.04□□□□□ -0.48
PTCH1-226ENST00000553011 CLEC2AQ6UVW9 174 aa12.04□□□□□ -0.48
PTCH1-226ENST00000553011 LRRN1Q6UXK5 716 aa12.04□□□□□ -0.48
PTCH1-226ENST00000553011 LURAP1LQ8IV03 231 aa12.04□□□□□ -0.48
PTCH1-226ENST00000553011 OR5AS1Q8N127 324 aa12.04□□□□□ -0.48
PTCH1-226ENST00000553011 RFLNBQ8N5W9 214 aa12.04□□□□□ -0.48
PTCH1-226ENST00000553011 OR51G2Q8NGK0 314 aa12.04□□□□□ -0.48
PTCH1-226ENST00000553011 NEU4Q8WWR8 484 aaPredicted RBP12.04□□□□□ -0.48
PTCH1-226ENST00000553011 HAVCR1Q96D42 359 aa12.04□□□□□ -0.48
PTCH1-226ENST00000553011 TTTY10Q9BZA0 68 aa12.04□□□□□ -0.48
PTCH1-226ENST00000553011 ADGRL4Q9HBW9 690 aa12.04□□□□□ -0.48
PTCH1-226ENST00000553011 MSL2Q9HCI7 577 aa12.04□□□□□ -0.48
PTCH1-226ENST00000553011 DLL4Q9NR61 685 aa12.04□□□□□ -0.48
PTCH1-226ENST00000553011 FAM118AQ9NWS6 357 aa12.04□□□□□ -0.48
PTCH1-226ENST00000553011 SMPD3Q9NY59 655 aaPredicted RBP12.04□□□□□ -0.48
PTCH1-226ENST00000553011 WARS2Q9UGM6 360 aaKnown RBP12.04□□□□□ -0.48
PTCH1-226ENST00000553011 LAMP5Q9UJQ1 280 aa12.04□□□□□ -0.48
PTCH1-226ENST00000553011 LOC100130705A0A1B0GUX0 176 aa12.03□□□□□ -0.48
PTCH1-226ENST00000553011 LYNX1G3V0Z9 82 aa12.03□□□□□ -0.48
PTCH1-226ENST00000553011 PSMD9O00233 223 aa12.03□□□□□ -0.48
PTCH1-226ENST00000553011 SPRY3O43610 288 aa12.03□□□□□ -0.48
PTCH1-226ENST00000553011 ENTPD6O75354 484 aa12.03□□□□□ -0.48
PTCH1-226ENST00000553011 APOL3O95236 402 aa12.03□□□□□ -0.48
PTCH1-226ENST00000553011 LYNX1P0DP58 116 aa12.03□□□□□ -0.48
PTCH1-226ENST00000553011 DAOP14920 347 aa12.03□□□□□ -0.48
PTCH1-226ENST00000553011 RAC2P15153 192 aa12.03□□□□□ -0.48
PTCH1-226ENST00000553011 ZNF81P51508 661 aa12.03□□□□□ -0.48
PTCH1-226ENST00000553011 SNRPGP62308 76 aaKnown RBP12.03□□□□□ -0.48
PTCH1-226ENST00000553011 GK2Q14410 553 aaPredicted RBP12.03□□□□□ -0.48
PTCH1-226ENST00000553011 TSTQ16762 297 aaKnown RBP12.03□□□□□ -0.48
PTCH1-226ENST00000553011 GLYATL3Q5SZD4 288 aa12.03□□□□□ -0.48
PTCH1-226ENST00000553011 Q6ZR03 302 aa12.03□□□□□ -0.48
PTCH1-226ENST00000553011 SLC35F2Q8IXU6 374 aa12.03□□□□□ -0.48
PTCH1-226ENST00000553011 OR2AE1Q8NHA4 323 aa12.03□□□□□ -0.48
PTCH1-226ENST00000553011 C10orf105Q8TEF2 133 aa12.03□□□□□ -0.48
PTCH1-226ENST00000553011 TRUB1Q8WWH5 349 aaKnown RBP12.03□□□□□ -0.48
PTCH1-226ENST00000553011 FAM168AQ92567 244 aa12.03□□□□□ -0.48
PTCH1-226ENST00000553011 RHNO1Q9BSD3 238 aa12.03□□□□□ -0.48
PTCH1-226ENST00000553011 DCLRE1BQ9H816 532 aa12.03□□□□□ -0.48
PTCH1-226ENST00000553011 BRD7Q9NPI1 651 aa12.03□□□□□ -0.48
PTCH1-226ENST00000553011 HAO2Q9NYQ3 351 aa12.03□□□□□ -0.48
PTCH1-226ENST00000553011 ABCA2Q9BZC7 2435 aa12.03□□□□□ -0.48
PTCH1-226ENST00000553011 SONP18583 2426 aaKnown RBP12.02□□□□□ -0.48
PTCH1-226ENST00000553011 PLSCR5A0PG75 271 aa12.02□□□□□ -0.49
PTCH1-226ENST00000553011 RNF223E7ERA6 249 aa12.02□□□□□ -0.49
PTCH1-226ENST00000553011 CASQ2O14958 399 aaPredicted RBP12.02□□□□□ -0.49
PTCH1-226ENST00000553011 SMAD7O15105 426 aaKnown RBP12.02□□□□□ -0.49
PTCH1-226ENST00000553011 IGHV1-46P01743 117 aa12.02□□□□□ -0.49
PTCH1-226ENST00000553011 MT-ND5P03915 603 aa12.02□□□□□ -0.49
PTCH1-226ENST00000553011 ANXA2P07355 339 aaKnown RBP12.02□□□□□ -0.49
PTCH1-226ENST00000553011 SBK2P0C263 348 aa12.02□□□□□ -0.49
PTCH1-226ENST00000553011 GABRB1P18505 474 aa12.02□□□□□ -0.49
PTCH1-226ENST00000553011 PDLIM4P50479 330 aa12.02□□□□□ -0.49
PTCH1-226ENST00000553011 ZNF121P58317 390 aaPredicted RBP12.02□□□□□ -0.49
PTCH1-226ENST00000553011 CCL8P80075 99 aa12.02□□□□□ -0.49
PTCH1-226ENST00000553011 ZNF92Q03936 586 aa12.02□□□□□ -0.49
PTCH1-226ENST00000553011 MALLQ13021 153 aa12.02□□□□□ -0.49
PTCH1-226ENST00000553011 SLC25A30Q5SVS4 291 aa12.02□□□□□ -0.49
PTCH1-226ENST00000553011 OGFRL1Q5TC84 451 aaPredicted RBP12.02□□□□□ -0.49
PTCH1-226ENST00000553011 USP51Q70EK9 711 aa12.02□□□□□ -0.49
PTCH1-226ENST00000553011 FAM57BQ71RH2 274 aa12.02□□□□□ -0.49
PTCH1-226ENST00000553011 RHOUQ7L0Q8 258 aa12.02□□□□□ -0.49
PTCH1-226ENST00000553011 PRSS45Q7RTY3 260 aa12.02□□□□□ -0.49
PTCH1-226ENST00000553011 KRT77Q7Z794 578 aa12.02□□□□□ -0.49
PTCH1-226ENST00000553011 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.02□□□□□ -0.49
PTCH1-226ENST00000553011 ENTHD1Q8IYW4 607 aa12.02□□□□□ -0.49
PTCH1-226ENST00000553011 PACRGLQ8N7B6 248 aa12.02□□□□□ -0.49
PTCH1-226ENST00000553011 UBASH3BQ8TF42 649 aa12.02□□□□□ -0.49
PTCH1-226ENST00000553011 RDH12Q96NR8 316 aa12.02□□□□□ -0.49
PTCH1-226ENST00000553011 LRP12Q9Y561 859 aa12.02□□□□□ -0.49
PTCH1-226ENST00000553011 TMEM14AQ9Y6G1 99 aa12.02□□□□□ -0.49
PTCH1-226ENST00000553011 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.02□□□□□ -0.49
PTCH1-226ENST00000553011 MALRD1Q5VYJ5 2156 aa12.01□□□□□ -0.49
PTCH1-226ENST00000553011 SLC16A6O15403 523 aa12.01□□□□□ -0.49
PTCH1-226ENST00000553011 MAGEB4O15481 346 aaPredicted RBP12.01□□□□□ -0.49
PTCH1-226ENST00000553011 TBX1O43435 398 aa12.01□□□□□ -0.49
PTCH1-226ENST00000553011 LILRA1O75019 489 aa12.01□□□□□ -0.49
PTCH1-226ENST00000553011 CSF3P09919 207 aa12.01□□□□□ -0.49
PTCH1-226ENST00000553011 COL8A2P25067 703 aa12.01□□□□□ -0.49
PTCH1-226ENST00000553011 LIPAP38571 399 aa12.01□□□□□ -0.49
PTCH1-226ENST00000553011 DSCR9P59020 149 aa12.01□□□□□ -0.49
PTCH1-226ENST00000553011 CXCR4P61073 352 aa12.01□□□□□ -0.49
PTCH1-226ENST00000553011 OCLNQ16625 522 aa12.01□□□□□ -0.49
PTCH1-226ENST00000553011 SPRNQ5BIV9 151 aa12.01□□□□□ -0.49
PTCH1-226ENST00000553011 KCTD18Q6PI47 426 aaPredicted RBP12.01□□□□□ -0.49
PTCH1-226ENST00000553011 PGAP1Q75T13 922 aa12.01□□□□□ -0.49
PTCH1-226ENST00000553011 MRPL21Q7Z2W9 205 aaKnown RBP12.01□□□□□ -0.49
PTCH1-226ENST00000553011 MAPK1IP1LQ8NDC0 245 aa12.01□□□□□ -0.49
PTCH1-226ENST00000553011 BHLHE23Q8NDY6 225 aa12.01□□□□□ -0.49
PTCH1-226ENST00000553011 ZNF555Q8NEP9 628 aa12.01□□□□□ -0.49
PTCH1-226ENST00000553011 RHOXF1Q8NHV9 184 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms