RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 CUL9Q8IWT3 2517 aa8.61□□□□□ -1.03
TMEM116-216ENST00000552800 FREM1Q5H8C1 2179 aa8.61□□□□□ -1.03
TMEM116-216ENST00000552800 TRAV8-7A0A075B6U6 113 aa8.6□□□□□ -1.03
TMEM116-216ENST00000552800 A0A087WV48 116 aa8.6□□□□□ -1.03
TMEM116-216ENST00000552800 A0A0A6YYH2 397 aa8.6□□□□□ -1.03
TMEM116-216ENST00000552800 A0A1W2PPL8 197 aa8.6□□□□□ -1.03
TMEM116-216ENST00000552800 A6NJ64 397 aa8.6□□□□□ -1.03
TMEM116-216ENST00000552800 SS18L1O75177 396 aaPredicted RBP8.6□□□□□ -1.03
TMEM116-216ENST00000552800 NCR1O76036 304 aa8.6□□□□□ -1.03
TMEM116-216ENST00000552800 ITGB2P05107 769 aa8.6□□□□□ -1.03
TMEM116-216ENST00000552800 CSF3P09919 207 aa8.6□□□□□ -1.03
TMEM116-216ENST00000552800 PRKAR1AP10644 381 aa8.6□□□□□ -1.03
TMEM116-216ENST00000552800 IL7P13232 177 aa8.6□□□□□ -1.03
TMEM116-216ENST00000552800 PITPNBP48739 271 aa8.6□□□□□ -1.03
TMEM116-216ENST00000552800 MRPS10P82664 201 aaKnown RBP8.6□□□□□ -1.03
TMEM116-216ENST00000552800 PITPNAQ00169 270 aa8.6□□□□□ -1.03
TMEM116-216ENST00000552800 SCN1BQ07699 218 aa8.6□□□□□ -1.03
TMEM116-216ENST00000552800 ZNF169Q14929 603 aaPredicted RBP8.6□□□□□ -1.03
TMEM116-216ENST00000552800 SF3B4Q15427 424 aaKnown RBP eCLIP8.6□□□□□ -1.03
TMEM116-216ENST00000552800 BAK1Q16611 211 aa8.6□□□□□ -1.03
TMEM116-216ENST00000552800 DEFB109BQ30KR1 87 aa8.6□□□□□ -1.03
TMEM116-216ENST00000552800 UBE2NLQ5JXB2 153 aa8.6□□□□□ -1.03
TMEM116-216ENST00000552800 IDNKQ5T6J7 187 aa8.6□□□□□ -1.03
TMEM116-216ENST00000552800 TSPO2Q5TGU0 170 aa8.6□□□□□ -1.03
TMEM116-216ENST00000552800 CORO6Q6QEF8 472 aa8.6□□□□□ -1.03
TMEM116-216ENST00000552800 PGAP1Q75T13 922 aa8.6□□□□□ -1.03
TMEM116-216ENST00000552800 UTS2BQ765I0 119 aa8.6□□□□□ -1.03
TMEM116-216ENST00000552800 DOK3Q7L591 496 aa8.6□□□□□ -1.03
TMEM116-216ENST00000552800 CCDC36Q8IYA8 594 aa8.6□□□□□ -1.03
TMEM116-216ENST00000552800 ZNF100Q8IYN0 542 aa8.6□□□□□ -1.03
TMEM116-216ENST00000552800 RDH10Q8IZV5 341 aa8.6□□□□□ -1.03
TMEM116-216ENST00000552800 DUSP18Q8NEJ0 188 aa8.6□□□□□ -1.03
TMEM116-216ENST00000552800 OR14K1Q8NGZ2 314 aa8.6□□□□□ -1.03
TMEM116-216ENST00000552800 TRMT10AQ8TBZ6 339 aaKnown RBP8.6□□□□□ -1.03
TMEM116-216ENST00000552800 PPP1R14AQ96A00 147 aa8.6□□□□□ -1.03
TMEM116-216ENST00000552800 SPSB4Q96A44 273 aa8.6□□□□□ -1.03
TMEM116-216ENST00000552800 SARAFQ96BY9 339 aa8.6□□□□□ -1.03
TMEM116-216ENST00000552800 HAVCR1Q96D42 359 aa8.6□□□□□ -1.03
TMEM116-216ENST00000552800 FOXN4Q96NZ1 517 aa8.6□□□□□ -1.03
TMEM116-216ENST00000552800 NUDT16L1Q9BRJ7 211 aaKnown RBP8.6□□□□□ -1.03
TMEM116-216ENST00000552800 RBM24Q9BX46 236 aaKnown RBP8.6□□□□□ -1.03
TMEM116-216ENST00000552800 TTTY10Q9BZA0 68 aa8.6□□□□□ -1.03
TMEM116-216ENST00000552800 RGCCQ9H4X1 137 aa8.6□□□□□ -1.03
TMEM116-216ENST00000552800 CENPMQ9NSP4 180 aa8.6□□□□□ -1.03
TMEM116-216ENST00000552800 ZNF319Q9P2F9 582 aa8.6□□□□□ -1.03
TMEM116-216ENST00000552800 STEAP1Q9UHE8 339 aa8.6□□□□□ -1.03
TMEM116-216ENST00000552800 DAPK2Q9UIK4 370 aa8.6□□□□□ -1.03
TMEM116-216ENST00000552800 DHDHQ9UQ10 334 aa8.6□□□□□ -1.03
TMEM116-216ENST00000552800 RTTNQ86VV8 2226 aa8.6□□□□□ -1.03
TMEM116-216ENST00000552800 MED12LQ86YW9 2145 aa8.59□□□□□ -1.03
TMEM116-216ENST00000552800 ELOA3CA0A087WX78 387 aaPredicted RBP8.59□□□□□ -1.03
TMEM116-216ENST00000552800 FAM166BA8MTA8 275 aa8.59□□□□□ -1.03
TMEM116-216ENST00000552800 K7ENP7 123 aa8.59□□□□□ -1.03
TMEM116-216ENST00000552800 TBX1O43435 398 aa8.59□□□□□ -1.03
TMEM116-216ENST00000552800 CRHP06850 196 aa8.59□□□□□ -1.03
TMEM116-216ENST00000552800 HOXD4P09016 255 aaPredicted RBP8.59□□□□□ -1.03
TMEM116-216ENST00000552800 PRF1P14222 555 aa8.59□□□□□ -1.03
TMEM116-216ENST00000552800 PTGER4P35408 488 aa8.59□□□□□ -1.03
TMEM116-216ENST00000552800 MAGEB1P43366 347 aa8.59□□□□□ -1.03
TMEM116-216ENST00000552800 OR3A2P47893 321 aa8.59□□□□□ -1.03
TMEM116-216ENST00000552800 ZNF121P58317 390 aaPredicted RBP8.59□□□□□ -1.03
TMEM116-216ENST00000552800 DEFA1P59665 94 aa8.59□□□□□ -1.03
TMEM116-216ENST00000552800 DEFA3P59666 94 aa8.59□□□□□ -1.03
TMEM116-216ENST00000552800 SGCAQ16586 387 aa8.59□□□□□ -1.03
TMEM116-216ENST00000552800 CEACAM16Q2WEN9 425 aa8.59□□□□□ -1.03
TMEM116-216ENST00000552800 BCL2L15Q5TBC7 163 aa8.59□□□□□ -1.03
TMEM116-216ENST00000552800 ZBTB37Q5TC79 503 aa8.59□□□□□ -1.03
TMEM116-216ENST00000552800 CARD17Q5XLA6 110 aa8.59□□□□□ -1.03
TMEM116-216ENST00000552800 GLT8D1Q68CQ7 371 aa8.59□□□□□ -1.03
TMEM116-216ENST00000552800 ZNF324BQ6AW86 544 aaPredicted RBP8.59□□□□□ -1.03
TMEM116-216ENST00000552800 INO80CQ6PI98 192 aaPredicted RBP8.59□□□□□ -1.03
TMEM116-216ENST00000552800 ABHD12BQ7Z5M8 362 aaPredicted RBP8.59□□□□□ -1.03
TMEM116-216ENST00000552800 TUSC5Q8IXB3 177 aa8.59□□□□□ -1.03
TMEM116-216ENST00000552800 UBQLNLQ8IYU4 475 aa8.59□□□□□ -1.03
TMEM116-216ENST00000552800 OR5D14Q8NGL3 314 aa8.59□□□□□ -1.03
TMEM116-216ENST00000552800 FNDC9Q8TBE3 224 aa8.59□□□□□ -1.03
TMEM116-216ENST00000552800 ABHD1Q96SE0 405 aa8.59□□□□□ -1.03
TMEM116-216ENST00000552800 PLEKHA1Q9HB21 404 aa8.59□□□□□ -1.03
TMEM116-216ENST00000552800 SLC7A10Q9NS82 523 aa8.59□□□□□ -1.03
TMEM116-216ENST00000552800 ZNF224Q9NZL3 707 aa8.59□□□□□ -1.03
TMEM116-216ENST00000552800 OR5V1Q9UGF6 321 aa8.59□□□□□ -1.03
TMEM116-216ENST00000552800 KLK13Q9UKR3 277 aa8.59□□□□□ -1.03
TMEM116-216ENST00000552800 TBC1D24Q9ULP9 559 aa8.59□□□□□ -1.03
TMEM116-216ENST00000552800 CSAG2Q9Y5P2 127 aa8.59□□□□□ -1.03
TMEM116-216ENST00000552800 LIPGQ9Y5X9 500 aa8.59□□□□□ -1.03
TMEM116-216ENST00000552800 A0A1B0GVG6 124 aa8.58□□□□□ -1.04
TMEM116-216ENST00000552800 LOC107986453A0A1B0GWG9 222 aa8.58□□□□□ -1.04
TMEM116-216ENST00000552800 A0A1W2PPK0 400 aa8.58□□□□□ -1.04
TMEM116-216ENST00000552800 J3QW42 95 aa8.58□□□□□ -1.04
TMEM116-216ENST00000552800 PLA2G10O15496 165 aa8.58□□□□□ -1.04
TMEM116-216ENST00000552800 KLK10O43240 276 aa8.58□□□□□ -1.04
TMEM116-216ENST00000552800 XRCC3O43542 346 aa8.58□□□□□ -1.04
TMEM116-216ENST00000552800 SGCEO43556 437 aa8.58□□□□□ -1.04
TMEM116-216ENST00000552800 RPLP1P05386 114 aaKnown RBP8.58□□□□□ -1.04
TMEM116-216ENST00000552800 EIF4EP06730 217 aaKnown RBP8.58□□□□□ -1.04
TMEM116-216ENST00000552800 SLC2A2P11168 524 aaPredicted RBP8.58□□□□□ -1.04
TMEM116-216ENST00000552800 GABRA1P14867 456 aa8.58□□□□□ -1.04
TMEM116-216ENST00000552800 ZNF24P17028 368 aa8.58□□□□□ -1.04
TMEM116-216ENST00000552800 RAB6AP20340 208 aa8.58□□□□□ -1.04
TMEM116-216ENST00000552800 TALDO1P37837 337 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms