RNA–Protein interactions for RNA: ENST00000552491.5

LIMA1-212, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 2,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-212ENST00000552491 TMEM200AQ86VY9 491 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 ZDHHC22Q8N966 263 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 CHST4Q8NCG5 386 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 ADAMTS18Q8TE60 1221 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 TMED6Q8WW62 240 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 ADIPOR1Q96A54 375 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 FAHD2AQ96GK7 314 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 GAL3ST4Q96RP7 486 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 PHB2Q99623 299 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 NICN1Q9BSH3 213 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 SLC7A5P2Q9GIP4 190 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 LAT2Q9GZY6 243 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 TXNIPQ9H3M7 391 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 FBRSQ9HAH7 460 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 ACKR4Q9NPB9 350 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 TMEM100Q9NV29 134 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 COA4Q9NYJ1 87 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 MLXQ9UH92 298 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 SHPKQ9UHJ6 478 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 MKL2Q9ULH7 1088 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 FAM96BQ9Y3D0 163 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 CSAG2Q9Y5P2 127 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 R4GMQ9 66 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 A0A0A6YYD4 124 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 C13orf42A0A1B0GVH6 325 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 METTL21EPA6NDL7 271 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 NUDT19A8MXV4 375 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 B4DGG1 531 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 ADAP1O75689 374 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 TNFP01375 233 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 PMP2P02689 132 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 RAB6AP20340 208 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 GALNSP34059 522 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 GABRA4P48169 554 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 DNASE1L1P49184 302 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 ARRB1P49407 418 aaPredicted RBP4.83□□□□□ -1.64
LIMA1-212ENST00000552491 HSD17B7P56937 341 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 B2MP61769 119 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 YPEL5P62699 121 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 BIKQ13323 160 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 SGCBQ16585 318 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 MICBQ29980 383 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 LINC01559Q495D7 138 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 DHRS7BQ6IAN0 325 aaPredicted RBP4.83□□□□□ -1.64
LIMA1-212ENST00000552491 HAGHLQ6PII5 290 aaPredicted RBP4.83□□□□□ -1.64
LIMA1-212ENST00000552491 RAB11FIP2Q7L804 512 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 DCXRQ7Z4W1 244 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 TMEM151BQ8IW70 566 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 GTPBP8Q8N3Z3 284 aaPredicted RBP4.83□□□□□ -1.64
LIMA1-212ENST00000552491 OR4K17Q8NGC6 315 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 STOML3Q8TAV4 291 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 MARCH1Q8TCQ1 289 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 GPR119Q8TDV5 335 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 ST7LQ8TDW4 575 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 TMEM230Q96A57 120 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 FGGYQ96C11 551 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 FOXRED1Q96CU9 486 aaPredicted RBP4.83□□□□□ -1.64
LIMA1-212ENST00000552491 ADAT3Q96EY9 351 aaPredicted RBP4.83□□□□□ -1.64
LIMA1-212ENST00000552491 SPACA5Q96QH8 159 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 C12orf57Q99622 126 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 CMSS1Q9BQ75 279 aaKnown RBP4.83□□□□□ -1.64
LIMA1-212ENST00000552491 SOX7Q9BT81 388 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 CHMP1AQ9HD42 196 aaPredicted RBP4.83□□□□□ -1.64
LIMA1-212ENST00000552491 LANCL2Q9NS86 450 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 ZNF629Q9UEG4 869 aaPredicted RBP4.83□□□□□ -1.64
LIMA1-212ENST00000552491 OR52A1Q9UKL2 312 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 HHLA2Q9UM44 414 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 CNTRLQ7Z7A1 2325 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 BRWD1Q9NSI6 2320 aa4.83□□□□□ -1.64
LIMA1-212ENST00000552491 KIR2DS5A0A0G2JLQ3 304 aa4.82□□□□□ -1.64
LIMA1-212ENST00000552491 A0A0G2JNG1 304 aa4.82□□□□□ -1.64
LIMA1-212ENST00000552491 TEX13DA0A0J9YY54 714 aaPredicted RBP4.82□□□□□ -1.64
LIMA1-212ENST00000552491 TMEM269A0A1B0GVZ9 245 aa4.82□□□□□ -1.64
LIMA1-212ENST00000552491 MEX3AA1L020 520 aaKnown RBP4.82□□□□□ -1.64
LIMA1-212ENST00000552491 C5orf51A6NDU8 294 aa4.82□□□□□ -1.64
LIMA1-212ENST00000552491 OR5K4A6NMS3 321 aa4.82□□□□□ -1.64
LIMA1-212ENST00000552491 F8W036 122 aa4.82□□□□□ -1.64
LIMA1-212ENST00000552491 KIR2DS3K7RE56 304 aa4.82□□□□□ -1.64
LIMA1-212ENST00000552491 PLPP3O14495 311 aa4.82□□□□□ -1.64
LIMA1-212ENST00000552491 ADAM10O14672 748 aa4.82□□□□□ -1.64
LIMA1-212ENST00000552491 NUDT14O95848 222 aa4.82□□□□□ -1.64
LIMA1-212ENST00000552491 DDAH2O95865 285 aa4.82□□□□□ -1.64
LIMA1-212ENST00000552491 IGKV3-11P04433 115 aa4.82□□□□□ -1.64
LIMA1-212ENST00000552491 ISG15P05161 165 aa4.82□□□□□ -1.64
LIMA1-212ENST00000552491 TPT1P13693 172 aaKnown RBP4.82□□□□□ -1.64
LIMA1-212ENST00000552491 PI3P19957 117 aa4.82□□□□□ -1.64
LIMA1-212ENST00000552491 PSMB6P28072 239 aa4.82□□□□□ -1.64
LIMA1-212ENST00000552491 CD1CP29017 333 aa4.82□□□□□ -1.64
LIMA1-212ENST00000552491 OR1D4P47884 311 aa4.82□□□□□ -1.64
LIMA1-212ENST00000552491 SLC6A8P48029 635 aa4.82□□□□□ -1.64
LIMA1-212ENST00000552491 KCNJ3P48549 501 aa4.82□□□□□ -1.64
LIMA1-212ENST00000552491 FOXL2P58012 376 aa4.82□□□□□ -1.64
LIMA1-212ENST00000552491 BLOC1S1P78537 153 aa4.82□□□□□ -1.64
LIMA1-212ENST00000552491 NAAAQ02083 359 aa4.82□□□□□ -1.64
LIMA1-212ENST00000552491 KIR2DS5Q14953 304 aa4.82□□□□□ -1.64
LIMA1-212ENST00000552491 H3F3CQ6NXT2 135 aa4.82□□□□□ -1.64
LIMA1-212ENST00000552491 PGAP1Q75T13 922 aa4.82□□□□□ -1.64
LIMA1-212ENST00000552491 MAMDC2Q7Z304 686 aaPredicted RBP4.82□□□□□ -1.64
LIMA1-212ENST00000552491 SPAG16Q8N0X2 631 aa4.82□□□□□ -1.64
LIMA1-212ENST00000552491 ZFP82Q8N141 532 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms