RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 C17orf100A8MU93 164 aa9.08□□□□□ -0.96
PTCH1-225ENST00000551845 TIMM8AO60220 97 aaPredicted RBP9.08□□□□□ -0.96
PTCH1-225ENST00000551845 MPZL2O60487 215 aa9.08□□□□□ -0.96
PTCH1-225ENST00000551845 CSF3P09919 207 aa9.08□□□□□ -0.96
PTCH1-225ENST00000551845 SELEP16581 610 aa9.08□□□□□ -0.96
PTCH1-225ENST00000551845 ALOX5APP20292 161 aa9.08□□□□□ -0.96
PTCH1-225ENST00000551845 OTX1P32242 354 aaPredicted RBP9.08□□□□□ -0.96
PTCH1-225ENST00000551845 ZNF81P51508 661 aa9.08□□□□□ -0.96
PTCH1-225ENST00000551845 HCCSP53701 268 aa9.08□□□□□ -0.96
PTCH1-225ENST00000551845 TMED1Q13445 227 aa9.08□□□□□ -0.96
PTCH1-225ENST00000551845 MAD2L1BPQ15013 274 aaPredicted RBP9.08□□□□□ -0.96
PTCH1-225ENST00000551845 PCGF3Q3KNV8 242 aa9.08□□□□□ -0.96
PTCH1-225ENST00000551845 ZMAT1Q5H9K5 638 aa9.08□□□□□ -0.96
PTCH1-225ENST00000551845 SLC25A30Q5SVS4 291 aa9.08□□□□□ -0.96
PTCH1-225ENST00000551845 MEDAGQ5VYS4 303 aa9.08□□□□□ -0.96
PTCH1-225ENST00000551845 CLEC2AQ6UVW9 174 aa9.08□□□□□ -0.96
PTCH1-225ENST00000551845 UBASH3BQ8TF42 649 aa9.08□□□□□ -0.96
PTCH1-225ENST00000551845 RNF133Q8WVZ7 376 aa9.08□□□□□ -0.96
PTCH1-225ENST00000551845 ASB17Q8WXJ9 295 aa9.08□□□□□ -0.96
PTCH1-225ENST00000551845 FAM168AQ92567 244 aa9.08□□□□□ -0.96
PTCH1-225ENST00000551845 UBE2FQ969M7 185 aa9.08□□□□□ -0.96
PTCH1-225ENST00000551845 ZNF582Q96NG8 517 aaPredicted RBP9.08□□□□□ -0.96
PTCH1-225ENST00000551845 RDH12Q96NR8 316 aa9.08□□□□□ -0.96
PTCH1-225ENST00000551845 MNTQ99583 582 aa9.08□□□□□ -0.96
PTCH1-225ENST00000551845 MROQ9BYG7 248 aa9.08□□□□□ -0.96
PTCH1-225ENST00000551845 TPK1Q9H3S4 243 aa9.08□□□□□ -0.96
PTCH1-225ENST00000551845 NIPAL2Q9H841 368 aa9.08□□□□□ -0.96
PTCH1-225ENST00000551845 DECR2Q9NUI1 292 aa9.08□□□□□ -0.96
PTCH1-225ENST00000551845 FAM118AQ9NWS6 357 aa9.08□□□□□ -0.96
PTCH1-225ENST00000551845 SMPD3Q9NY59 655 aaPredicted RBP9.08□□□□□ -0.96
PTCH1-225ENST00000551845 PTTG3PQ9NZH4 202 aa9.08□□□□□ -0.96
PTCH1-225ENST00000551845 CGGBP1Q9UFW8 167 aaPredicted RBP9.08□□□□□ -0.96
PTCH1-225ENST00000551845 PURGQ9UJV8 347 aaKnown RBP9.08□□□□□ -0.96
PTCH1-225ENST00000551845 MAP1AP78559 2803 aaPredicted RBP9.08□□□□□ -0.96
PTCH1-225ENST00000551845 FLNAP21333 2647 aaKnown RBP9.07□□□□□ -0.96
PTCH1-225ENST00000551845 DSCAMO60469 2012 aa9.07□□□□□ -0.96
PTCH1-225ENST00000551845 LOC390937A0A1W2PQ73 354 aa9.07□□□□□ -0.96
PTCH1-225ENST00000551845 CCDC182A6NF36 153 aa9.07□□□□□ -0.96
PTCH1-225ENST00000551845 H0YHG0 523 aa9.07□□□□□ -0.96
PTCH1-225ENST00000551845 M0R129 80 aa9.07□□□□□ -0.96
PTCH1-225ENST00000551845 PHYHO14832 338 aa9.07□□□□□ -0.96
PTCH1-225ENST00000551845 SLC16A6O15403 523 aa9.07□□□□□ -0.96
PTCH1-225ENST00000551845 TPD52L2O43399 206 aaKnown RBP9.07□□□□□ -0.96
PTCH1-225ENST00000551845 LY6HO94772 140 aa9.07□□□□□ -0.96
PTCH1-225ENST00000551845 MRPL3P09001 348 aaKnown RBP9.07□□□□□ -0.96
PTCH1-225ENST00000551845 SBK2P0C263 348 aa9.07□□□□□ -0.96
PTCH1-225ENST00000551845 PSKH1P11801 424 aa9.07□□□□□ -0.96
PTCH1-225ENST00000551845 DAOP14920 347 aa9.07□□□□□ -0.96
PTCH1-225ENST00000551845 KITLGP21583 273 aa9.07□□□□□ -0.96
PTCH1-225ENST00000551845 HTR1FP30939 366 aa9.07□□□□□ -0.96
PTCH1-225ENST00000551845 OPRL1P41146 370 aa9.07□□□□□ -0.96
PTCH1-225ENST00000551845 PDLIM4P50479 330 aa9.07□□□□□ -0.96
PTCH1-225ENST00000551845 MMP15P51511 669 aa9.07□□□□□ -0.96
PTCH1-225ENST00000551845 SNRPGP62308 76 aaKnown RBP9.07□□□□□ -0.96
PTCH1-225ENST00000551845 POU4F2Q12837 409 aa9.07□□□□□ -0.96
PTCH1-225ENST00000551845 TNK1Q13470 666 aa9.07□□□□□ -0.96
PTCH1-225ENST00000551845 GGTLC2Q14390 218 aa9.07□□□□□ -0.96
PTCH1-225ENST00000551845 HLXQ14774 488 aaPredicted RBP9.07□□□□□ -0.96
PTCH1-225ENST00000551845 OCLNQ16625 522 aa9.07□□□□□ -0.96
PTCH1-225ENST00000551845 LPCAT4Q643R3 524 aa9.07□□□□□ -0.96
PTCH1-225ENST00000551845 DEGS2Q6QHC5 323 aa9.07□□□□□ -0.96
PTCH1-225ENST00000551845 FBXW12Q6X9E4 464 aa9.07□□□□□ -0.96
PTCH1-225ENST00000551845 PGAP1Q75T13 922 aa9.07□□□□□ -0.96
PTCH1-225ENST00000551845 KRT77Q7Z794 578 aa9.07□□□□□ -0.96
PTCH1-225ENST00000551845 PACRGLQ8N7B6 248 aa9.07□□□□□ -0.96
PTCH1-225ENST00000551845 ZNF540Q8NDQ6 660 aa9.07□□□□□ -0.96
PTCH1-225ENST00000551845 Q96MT0 163 aa9.07□□□□□ -0.96
PTCH1-225ENST00000551845 DIRC2Q96SL1 478 aa9.07□□□□□ -0.96
PTCH1-225ENST00000551845 MBOAT4Q96T53 435 aa9.07□□□□□ -0.96
PTCH1-225ENST00000551845 CNN2Q99439 309 aaKnown RBP9.07□□□□□ -0.96
PTCH1-225ENST00000551845 NKIRAS2Q9NYR9 191 aa9.07□□□□□ -0.96
PTCH1-225ENST00000551845 ZDHHC8Q9ULC8 765 aa9.07□□□□□ -0.96
PTCH1-225ENST00000551845 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.07□□□□□ -0.96
PTCH1-225ENST00000551845 TRIM64A6NGJ6 449 aa9.06□□□□□ -0.96
PTCH1-225ENST00000551845 TRIM64BA6NI03 449 aa9.06□□□□□ -0.96
PTCH1-225ENST00000551845 E9PQ18 207 aa9.06□□□□□ -0.96
PTCH1-225ENST00000551845 ZNF670-ZNF695F2Z2N8 137 aa9.06□□□□□ -0.96
PTCH1-225ENST00000551845 NDUFS8O00217 210 aa9.06□□□□□ -0.96
PTCH1-225ENST00000551845 SMAD7O15105 426 aaKnown RBP9.06□□□□□ -0.96
PTCH1-225ENST00000551845 SPRY3O43610 288 aa9.06□□□□□ -0.96
PTCH1-225ENST00000551845 ZNF254O75437 659 aa9.06□□□□□ -0.96
PTCH1-225ENST00000551845 ANXA2P07355 339 aaKnown RBP9.06□□□□□ -0.96
PTCH1-225ENST00000551845 OR2T7P0C7T2 308 aa9.06□□□□□ -0.96
PTCH1-225ENST00000551845 CX3CR1P49238 355 aa9.06□□□□□ -0.96
PTCH1-225ENST00000551845 CCL8P80075 99 aa9.06□□□□□ -0.96
PTCH1-225ENST00000551845 SLC34A1Q06495 639 aa9.06□□□□□ -0.96
PTCH1-225ENST00000551845 GK2Q14410 553 aaPredicted RBP9.06□□□□□ -0.96
PTCH1-225ENST00000551845 CARTPTQ16568 116 aa9.06□□□□□ -0.96
PTCH1-225ENST00000551845 TTC23Q5W5X9 447 aa9.06□□□□□ -0.96
PTCH1-225ENST00000551845 OR2T2Q6IF00 324 aa9.06□□□□□ -0.96
PTCH1-225ENST00000551845 DNM1P46Q6ZS02 220 aa9.06□□□□□ -0.96
PTCH1-225ENST00000551845 USP51Q70EK9 711 aa9.06□□□□□ -0.96
PTCH1-225ENST00000551845 MRPL21Q7Z2W9 205 aaKnown RBP9.06□□□□□ -0.96
PTCH1-225ENST00000551845 SLC35F2Q8IXU6 374 aa9.06□□□□□ -0.96
PTCH1-225ENST00000551845 ZNF786Q8N393 782 aa9.06□□□□□ -0.96
PTCH1-225ENST00000551845 ZNF525Q8N782 197 aa9.06□□□□□ -0.96
PTCH1-225ENST00000551845 OR8G5Q8NG78 346 aa9.06□□□□□ -0.96
PTCH1-225ENST00000551845 OR52H1Q8NGJ2 320 aa9.06□□□□□ -0.96
PTCH1-225ENST00000551845 OR51G2Q8NGK0 314 aa9.06□□□□□ -0.96
PTCH1-225ENST00000551845 OR2T27Q8NH04 317 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms