RNA–Protein interactions for RNA: ENST00000551305.5

TMEM106C-216, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best)

Gene TMEM106C, Length 1,356 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-216ENST00000551305 HDHD2Q9H0R4 259 aa12.29□□□□□ -0.44
TMEM106C-216ENST00000551305 RASSF4Q9H2L5 321 aa12.29□□□□□ -0.44
TMEM106C-216ENST00000551305 MMADHCQ9H3L0 296 aaPredicted RBP12.29□□□□□ -0.44
TMEM106C-216ENST00000551305 SRA1Q9HD15 236 aaKnown RBP12.29□□□□□ -0.44
TMEM106C-216ENST00000551305 HMGB1P1B2RPK0 211 aaPredicted RBP12.28□□□□□ -0.44
TMEM106C-216ENST00000551305 ZNF879B4DU55 563 aa12.28□□□□□ -0.44
TMEM106C-216ENST00000551305 TOX4O94842 621 aa12.28□□□□□ -0.44
TMEM106C-216ENST00000551305 SERPINA1P01009 418 aa12.28□□□□□ -0.44
TMEM106C-216ENST00000551305 ACSM4P0C7M7 580 aa12.28□□□□□ -0.44
TMEM106C-216ENST00000551305 MMP9P14780 707 aa12.28□□□□□ -0.44
TMEM106C-216ENST00000551305 CD200P41217 278 aa12.28□□□□□ -0.44
TMEM106C-216ENST00000551305 OMPP47874 163 aa12.28□□□□□ -0.44
TMEM106C-216ENST00000551305 BPIFB3P59826 476 aa12.28□□□□□ -0.44
TMEM106C-216ENST00000551305 LIPEQ05469 1076 aa12.28□□□□□ -0.44
TMEM106C-216ENST00000551305 MAPRE2Q15555 327 aa12.28□□□□□ -0.44
TMEM106C-216ENST00000551305 KRTAP27-1Q3LI81 207 aa12.28□□□□□ -0.44
TMEM106C-216ENST00000551305 ASPHD2Q6ICH7 369 aa12.28□□□□□ -0.44
TMEM106C-216ENST00000551305 CFAP77Q6ZQR2 320 aa12.28□□□□□ -0.44
TMEM106C-216ENST00000551305 SLC15A3Q8IY34 581 aa12.28□□□□□ -0.44
TMEM106C-216ENST00000551305 OR11L1Q8NGX0 322 aa12.28□□□□□ -0.44
TMEM106C-216ENST00000551305 RCN3Q96D15 328 aa12.28□□□□□ -0.44
TMEM106C-216ENST00000551305 RSRC1Q96IZ7 334 aaKnown RBP12.28□□□□□ -0.44
TMEM106C-216ENST00000551305 FAM71F1Q96KD3 344 aaPredicted RBP12.28□□□□□ -0.44
TMEM106C-216ENST00000551305 GPX7Q96SL4 187 aaPredicted RBP12.28□□□□□ -0.44
TMEM106C-216ENST00000551305 PKP2Q99959 881 aa12.28□□□□□ -0.44
TMEM106C-216ENST00000551305 RBM4BQ9BQ04 359 aaKnown RBP12.28□□□□□ -0.44
TMEM106C-216ENST00000551305 NDEL1Q9GZM8 345 aa12.28□□□□□ -0.44
TMEM106C-216ENST00000551305 MMP27Q9H306 513 aa12.28□□□□□ -0.44
TMEM106C-216ENST00000551305 B9D1Q9UPM9 204 aa12.28□□□□□ -0.44
TMEM106C-216ENST00000551305 TMEM5Q9Y2B1 443 aa12.28□□□□□ -0.44
TMEM106C-216ENST00000551305 RNF114Q9Y508 228 aa12.28□□□□□ -0.44
TMEM106C-216ENST00000551305 IGLV1-36A0A0B4J1U3 117 aa12.27□□□□□ -0.45
TMEM106C-216ENST00000551305 C3orf80F5H4A9 247 aa12.27□□□□□ -0.45
TMEM106C-216ENST00000551305 M0QZ24 198 aa12.27□□□□□ -0.45
TMEM106C-216ENST00000551305 P2RY10O00398 339 aa12.27□□□□□ -0.45
TMEM106C-216ENST00000551305 TXNDC12O95881 172 aa12.27□□□□□ -0.45
TMEM106C-216ENST00000551305 LCATP04180 440 aa12.27□□□□□ -0.45
TMEM106C-216ENST00000551305 COX10Q12887 443 aa12.27□□□□□ -0.45
TMEM106C-216ENST00000551305 CGB2Q6NT52 195 aa12.27□□□□□ -0.45
TMEM106C-216ENST00000551305 DPY19L2P2Q6ZN68 376 aa12.27□□□□□ -0.45
TMEM106C-216ENST00000551305 ZNF620Q6ZNG0 422 aa12.27□□□□□ -0.45
TMEM106C-216ENST00000551305 C1QL4Q86Z23 238 aa12.27□□□□□ -0.45
TMEM106C-216ENST00000551305 PDZD9Q8IXQ8 264 aa12.27□□□□□ -0.45
TMEM106C-216ENST00000551305 OR6V1Q8N148 313 aa12.27□□□□□ -0.45
TMEM106C-216ENST00000551305 TMEM86BQ8N661 226 aa12.27□□□□□ -0.45
TMEM106C-216ENST00000551305 CELF2-AS1Q8N7Q2 184 aa12.27□□□□□ -0.45
TMEM106C-216ENST00000551305 LINC01006Q8NI28 216 aa12.27□□□□□ -0.45
TMEM106C-216ENST00000551305 LHX4Q969G2 390 aa12.27□□□□□ -0.45
TMEM106C-216ENST00000551305 WDFY2Q96P53 400 aa12.27□□□□□ -0.45
TMEM106C-216ENST00000551305 PITX2Q99697 317 aa12.27□□□□□ -0.45
TMEM106C-216ENST00000551305 SMURF1Q9HCE7 757 aa12.27□□□□□ -0.45
TMEM106C-216ENST00000551305 ERVK-18Q9QC07 812 aa12.27□□□□□ -0.45
TMEM106C-216ENST00000551305 ENPP4Q9Y6X5 453 aa12.27□□□□□ -0.45
TMEM106C-216ENST00000551305 UNC119BA6NIH7 251 aa12.26□□□□□ -0.45
TMEM106C-216ENST00000551305 GSTA4O15217 222 aa12.26□□□□□ -0.45
TMEM106C-216ENST00000551305 FCN3O75636 299 aa12.26□□□□□ -0.45
TMEM106C-216ENST00000551305 PPP1R3DO95685 299 aa12.26□□□□□ -0.45
TMEM106C-216ENST00000551305 IGHV4-59P01825 116 aa12.26□□□□□ -0.45
TMEM106C-216ENST00000551305 H1F0P07305 194 aaKnown RBP12.26□□□□□ -0.45
TMEM106C-216ENST00000551305 NCK1P16333 377 aa12.26□□□□□ -0.45
TMEM106C-216ENST00000551305 CA6P23280 308 aa12.26□□□□□ -0.45
TMEM106C-216ENST00000551305 ANOS1P23352 680 aa12.26□□□□□ -0.45
TMEM106C-216ENST00000551305 MDH1P40925 334 aaKnown RBP12.26□□□□□ -0.45
TMEM106C-216ENST00000551305 NPY4RP50391 375 aa12.26□□□□□ -0.45
TMEM106C-216ENST00000551305 RPS6KA3P51812 740 aa12.26□□□□□ -0.45
TMEM106C-216ENST00000551305 POU4F2Q12837 409 aa12.26□□□□□ -0.45
TMEM106C-216ENST00000551305 SEC23BQ15437 767 aa12.26□□□□□ -0.45
TMEM106C-216ENST00000551305 OR8G1Q15617 311 aa12.26□□□□□ -0.45
TMEM106C-216ENST00000551305 OR8B8Q15620 311 aa12.26□□□□□ -0.45
TMEM106C-216ENST00000551305 SLC18B1Q6NT16 456 aa12.26□□□□□ -0.45
TMEM106C-216ENST00000551305 ADCK1Q86TW2 530 aa12.26□□□□□ -0.45
TMEM106C-216ENST00000551305 SPRYD4Q8WW59 207 aaPredicted RBP12.26□□□□□ -0.45
TMEM106C-216ENST00000551305 GATAD2BQ8WXI9 593 aa12.26□□□□□ -0.45
TMEM106C-216ENST00000551305 ERGIC1Q969X5 290 aa12.26□□□□□ -0.45
TMEM106C-216ENST00000551305 ERMAPQ96PL5 475 aaPredicted RBP12.26□□□□□ -0.45
TMEM106C-216ENST00000551305 NMNAT3Q96T66 252 aa12.26□□□□□ -0.45
TMEM106C-216ENST00000551305 ANKRD19PQ9H560 264 aa12.26□□□□□ -0.45
TMEM106C-216ENST00000551305 ACOXLQ9NUZ1 547 aa12.26□□□□□ -0.45
TMEM106C-216ENST00000551305 ARMCX1Q9P291 453 aa12.26□□□□□ -0.45
TMEM106C-216ENST00000551305 RNF7Q9UBF6 113 aa12.26□□□□□ -0.45
TMEM106C-216ENST00000551305 POMT1Q9Y6A1 747 aa12.26□□□□□ -0.45
TMEM106C-216ENST00000551305 WNK1Q9H4A3 2382 aa12.25□□□□□ -0.45
TMEM106C-216ENST00000551305 IGHV1-69DA0A0B4J2H0 117 aa12.25□□□□□ -0.45
TMEM106C-216ENST00000551305 TRBV4-1A0A0J9YWV2 114 aa12.25□□□□□ -0.45
TMEM106C-216ENST00000551305 A0A0U1RQK1 487 aa12.25□□□□□ -0.45
TMEM106C-216ENST00000551305 C5orf63A6NC05 138 aa12.25□□□□□ -0.45
TMEM106C-216ENST00000551305 LGALS8O00214 317 aa12.25□□□□□ -0.45
TMEM106C-216ENST00000551305 TIMM23O14925 209 aa12.25□□□□□ -0.45
TMEM106C-216ENST00000551305 ADAM20O43506 726 aa12.25□□□□□ -0.45
TMEM106C-216ENST00000551305 GPR137BO60478 399 aa12.25□□□□□ -0.45
TMEM106C-216ENST00000551305 DIRAS1O95057 198 aa12.25□□□□□ -0.45
TMEM106C-216ENST00000551305 IGHV1-69P01742 117 aa12.25□□□□□ -0.45
TMEM106C-216ENST00000551305 GYPAP02724 150 aa12.25□□□□□ -0.45
TMEM106C-216ENST00000551305 CRABP1P29762 137 aa12.25□□□□□ -0.45
TMEM106C-216ENST00000551305 ARF6P62330 175 aa12.25□□□□□ -0.45
TMEM106C-216ENST00000551305 TRAP1Q12931 704 aaKnown RBP12.25□□□□□ -0.45
TMEM106C-216ENST00000551305 FGD3Q5JSP0 725 aa12.25□□□□□ -0.45
TMEM106C-216ENST00000551305 CD276Q5ZPR3 534 aa12.25□□□□□ -0.45
TMEM106C-216ENST00000551305 ZNF826PQ6ZT77 177 aa12.25□□□□□ -0.45
TMEM106C-216ENST00000551305 PGAP1Q75T13 922 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms