RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 GNB2P62879 340 aa6.37□□□□□ -1.39
NEK3-201ENST00000550331 HIST1H3AP68431 136 aa6.37□□□□□ -1.39
NEK3-201ENST00000550331 COX10Q12887 443 aa6.37□□□□□ -1.39
NEK3-201ENST00000550331 HLXQ14774 488 aaPredicted RBP6.37□□□□□ -1.39
NEK3-201ENST00000550331 SLC9A3R2Q15599 337 aa6.37□□□□□ -1.39
NEK3-201ENST00000550331 ZNF404Q494X3 552 aa6.37□□□□□ -1.39
NEK3-201ENST00000550331 HIST2H3PS2Q5TEC6 136 aa6.37□□□□□ -1.39
NEK3-201ENST00000550331 OR2T2Q6IF00 324 aa6.37□□□□□ -1.39
NEK3-201ENST00000550331 C8orf82Q6P1X6 216 aaPredicted RBP6.37□□□□□ -1.39
NEK3-201ENST00000550331 LEG1Q6P5S2 330 aa6.37□□□□□ -1.39
NEK3-201ENST00000550331 DPY19L2P2Q6ZN68 376 aa6.37□□□□□ -1.39
NEK3-201ENST00000550331 HIST2H3AQ71DI3 136 aa6.37□□□□□ -1.39
NEK3-201ENST00000550331 NLRC3Q7RTR2 1065 aa6.37□□□□□ -1.39
NEK3-201ENST00000550331 TSEN54Q7Z6J9 526 aaKnown RBP6.37□□□□□ -1.39
NEK3-201ENST00000550331 KLBQ86Z14 1044 aa6.37□□□□□ -1.39
NEK3-201ENST00000550331 C1orf87Q8N0U7 546 aa6.37□□□□□ -1.39
NEK3-201ENST00000550331 OR5AS1Q8N127 324 aa6.37□□□□□ -1.39
NEK3-201ENST00000550331 CELF2-AS1Q8N7Q2 184 aa6.37□□□□□ -1.39
NEK3-201ENST00000550331 OR10AD1Q8NGE0 317 aa6.37□□□□□ -1.39
NEK3-201ENST00000550331 ZNF420Q8TAQ5 688 aaPredicted RBP6.37□□□□□ -1.39
NEK3-201ENST00000550331 RAB40AQ8WXH6 277 aa6.37□□□□□ -1.39
NEK3-201ENST00000550331 ERGIC1Q969X5 290 aa6.37□□□□□ -1.39
NEK3-201ENST00000550331 NEIL1Q96FI4 390 aaPredicted RBP6.37□□□□□ -1.39
NEK3-201ENST00000550331 RSRC1Q96IZ7 334 aaKnown RBP6.37□□□□□ -1.39
NEK3-201ENST00000550331 HOPXQ9BPY8 73 aaPredicted RBP6.37□□□□□ -1.39
NEK3-201ENST00000550331 SLC30A2Q9BRI3 323 aa6.37□□□□□ -1.39
NEK3-201ENST00000550331 C1QTNF5Q9BXJ0 243 aa6.37□□□□□ -1.39
NEK3-201ENST00000550331 SLITRK2Q9H156 845 aa6.37□□□□□ -1.39
NEK3-201ENST00000550331 RERGLQ9H628 205 aa6.37□□□□□ -1.39
NEK3-201ENST00000550331 UNKLQ9H9P5 680 aaKnown RBP6.37□□□□□ -1.39
NEK3-201ENST00000550331 TMEM165Q9HC07 324 aa6.37□□□□□ -1.39
NEK3-201ENST00000550331 KRCC1Q9NPI7 259 aaPredicted RBP6.37□□□□□ -1.39
NEK3-201ENST00000550331 PTTG3PQ9NZH4 202 aa6.37□□□□□ -1.39
NEK3-201ENST00000550331 ARMCX1Q9P291 453 aa6.37□□□□□ -1.39
NEK3-201ENST00000550331 POLR1DQ9Y2S0 133 aa6.37□□□□□ -1.39
NEK3-201ENST00000550331 NBEAL2Q6ZNJ1 2754 aa6.36□□□□□ -1.39
NEK3-201ENST00000550331 TRAV40A0A0B4J280 105 aa6.36□□□□□ -1.39
NEK3-201ENST00000550331 KIR2DS1A0A191URI9 304 aa6.36□□□□□ -1.39
NEK3-201ENST00000550331 CYB5R3P00387 301 aaPredicted RBP6.36□□□□□ -1.39
NEK3-201ENST00000550331 IRF2P14316 349 aa6.36□□□□□ -1.39
NEK3-201ENST00000550331 H2AFXP16104 143 aaPredicted RBP6.36□□□□□ -1.39
NEK3-201ENST00000550331 RHCEP18577 417 aa6.36□□□□□ -1.39
NEK3-201ENST00000550331 PITPNBP48739 271 aa6.36□□□□□ -1.39
NEK3-201ENST00000550331 GSK3BP49841 420 aa6.36□□□□□ -1.39
NEK3-201ENST00000550331 SLC7A2P52569 658 aa6.36□□□□□ -1.39
NEK3-201ENST00000550331 FXYD6P3P58550 94 aa6.36□□□□□ -1.39
NEK3-201ENST00000550331 ECH1Q13011 328 aa6.36□□□□□ -1.39
NEK3-201ENST00000550331 KRTAP27-1Q3LI81 207 aa6.36□□□□□ -1.39
NEK3-201ENST00000550331 FGD3Q5JSP0 725 aa6.36□□□□□ -1.39
NEK3-201ENST00000550331 OTPQ5XKR4 325 aa6.36□□□□□ -1.39
NEK3-201ENST00000550331 SMARCD3Q6STE5 483 aa6.36□□□□□ -1.39
NEK3-201ENST00000550331 HACD2Q6Y1H2 254 aa6.36□□□□□ -1.39
NEK3-201ENST00000550331 DCDC5Q6ZRR9 648 aa6.36□□□□□ -1.39
NEK3-201ENST00000550331 COLCA1Q6ZS62 124 aa6.36□□□□□ -1.39
NEK3-201ENST00000550331 PTCHD4Q6ZW05 846 aa6.36□□□□□ -1.39
NEK3-201ENST00000550331 MOGAT3Q86VF5 341 aa6.36□□□□□ -1.39
NEK3-201ENST00000550331 OR8B3Q8NGG8 313 aa6.36□□□□□ -1.39
NEK3-201ENST00000550331 Q8TCH9 128 aa6.36□□□□□ -1.39
NEK3-201ENST00000550331 FAM162AQ96A26 154 aa6.36□□□□□ -1.39
NEK3-201ENST00000550331 OR8B2Q96RD0 313 aa6.36□□□□□ -1.39
NEK3-201ENST00000550331 TMEM246Q9BRR3 403 aa6.36□□□□□ -1.39
NEK3-201ENST00000550331 HCAR1Q9BXC0 346 aa6.36□□□□□ -1.39
NEK3-201ENST00000550331 PRDM13Q9H4Q3 707 aa6.36□□□□□ -1.39
NEK3-201ENST00000550331 EFCAB1Q9HAE3 211 aa6.36□□□□□ -1.39
NEK3-201ENST00000550331 TMEM100Q9NV29 134 aa6.36□□□□□ -1.39
NEK3-201ENST00000550331 NDUFAF4Q9P032 175 aa6.36□□□□□ -1.39
NEK3-201ENST00000550331 RPS6KA6Q9UK32 745 aa6.36□□□□□ -1.39
NEK3-201ENST00000550331 FAM32AQ9Y421 112 aaKnown RBP6.36□□□□□ -1.39
NEK3-201ENST00000550331 IER3IP1Q9Y5U9 82 aa6.36□□□□□ -1.39
NEK3-201ENST00000550331 LHFPL6Q9Y693 200 aa6.36□□□□□ -1.39
NEK3-201ENST00000550331 TANC2Q9HCD6 1990 aa6.36□□□□□ -1.39
NEK3-201ENST00000550331 ARHGAP32A7KAX9 2087 aa6.35□□□□□ -1.39
NEK3-201ENST00000550331 IGHV3OR16-10A0A075B7F0 116 aa6.35□□□□□ -1.39
NEK3-201ENST00000550331 IGLV1-36A0A0B4J1U3 117 aa6.35□□□□□ -1.39
NEK3-201ENST00000550331 A0A1B0GUS0 222 aa6.35□□□□□ -1.39
NEK3-201ENST00000550331 UNC119BA6NIH7 251 aa6.35□□□□□ -1.39
NEK3-201ENST00000550331 F5H5P2 479 aa6.35□□□□□ -1.39
NEK3-201ENST00000550331 H0YL77 283 aa6.35□□□□□ -1.39
NEK3-201ENST00000550331 DCTN6O00399 190 aa6.35□□□□□ -1.39
NEK3-201ENST00000550331 IMPA2O14732 288 aa6.35□□□□□ -1.39
NEK3-201ENST00000550331 PHYHO14832 338 aa6.35□□□□□ -1.39
NEK3-201ENST00000550331 ARPC3O15145 178 aa6.35□□□□□ -1.39
NEK3-201ENST00000550331 ENSAO43768 121 aaKnown RBP6.35□□□□□ -1.39
NEK3-201ENST00000550331 SASH3O75995 380 aa6.35□□□□□ -1.39
NEK3-201ENST00000550331 ZNF205O95201 554 aa6.35□□□□□ -1.39
NEK3-201ENST00000550331 PPP1R3DO95685 299 aa6.35□□□□□ -1.39
NEK3-201ENST00000550331 COX4I1P13073 169 aa6.35□□□□□ -1.39
NEK3-201ENST00000550331 FPR3P25089 353 aa6.35□□□□□ -1.39
NEK3-201ENST00000550331 SLC6A6P31641 620 aa6.35□□□□□ -1.39
NEK3-201ENST00000550331 PSMB10P40306 273 aa6.35□□□□□ -1.39
NEK3-201ENST00000550331 CD200P41217 278 aa6.35□□□□□ -1.39
NEK3-201ENST00000550331 CDKN2AP42771 156 aaKnown RBP6.35□□□□□ -1.39
NEK3-201ENST00000550331 NPY4RP50391 375 aa6.35□□□□□ -1.39
NEK3-201ENST00000550331 SF3A3Q12874 501 aaKnown RBP eCLIP6.35□□□□□ -1.39
NEK3-201ENST00000550331 MALLQ13021 153 aa6.35□□□□□ -1.39
NEK3-201ENST00000550331 SEC23BQ15437 767 aa6.35□□□□□ -1.39
NEK3-201ENST00000550331 OCLNQ16625 522 aa6.35□□□□□ -1.39
NEK3-201ENST00000550331 MEP1BQ16820 701 aa6.35□□□□□ -1.39
NEK3-201ENST00000550331 ZNF362Q5T0B9 420 aaPredicted RBP6.35□□□□□ -1.39
NEK3-201ENST00000550331 WDR25Q64LD2 544 aaPredicted RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms