RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 SPATA46Q5T0L3 261 aa12.37□□□□□ -0.43
DDX54-203ENST00000546869 PRSS45Q7RTY3 260 aa12.37□□□□□ -0.43
DDX54-203ENST00000546869 TGIF2LYQ8IUE0 185 aa12.37□□□□□ -0.43
DDX54-203ENST00000546869 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.37□□□□□ -0.43
DDX54-203ENST00000546869 EGFL6Q8IUX8 553 aa12.37□□□□□ -0.43
DDX54-203ENST00000546869 ZNF679Q8IYX0 411 aa12.37□□□□□ -0.43
DDX54-203ENST00000546869 OR2T27Q8NH04 317 aa12.37□□□□□ -0.43
DDX54-203ENST00000546869 SNX33Q8WV41 574 aa12.37□□□□□ -0.43
DDX54-203ENST00000546869 CMBLQ96DG6 245 aa12.37□□□□□ -0.43
DDX54-203ENST00000546869 DIRC2Q96SL1 478 aa12.37□□□□□ -0.43
DDX54-203ENST00000546869 VRK1Q99986 396 aaPredicted RBP12.37□□□□□ -0.43
DDX54-203ENST00000546869 MROQ9BYG7 248 aa12.37□□□□□ -0.43
DDX54-203ENST00000546869 POFUT1Q9H488 388 aa12.37□□□□□ -0.43
DDX54-203ENST00000546869 PURGQ9UJV8 347 aaKnown RBP12.37□□□□□ -0.43
DDX54-203ENST00000546869 HSPE1-MOB4S4R3N1 261 aa12.37□□□□□ -0.43
DDX54-203ENST00000546869 PRRC2AP48634 2157 aaKnown RBP12.37□□□□□ -0.43
DDX54-203ENST00000546869 USF3Q68DE3 2245 aa12.37□□□□□ -0.43
DDX54-203ENST00000546869 MRPL3P09001 348 aaKnown RBP12.36□□□□□ -0.43
DDX54-203ENST00000546869 CSF3P09919 207 aa12.36□□□□□ -0.43
DDX54-203ENST00000546869 SELEP16581 610 aa12.36□□□□□ -0.43
DDX54-203ENST00000546869 ALDH3B1P43353 468 aa12.36□□□□□ -0.43
DDX54-203ENST00000546869 MTNR1AP48039 350 aa12.36□□□□□ -0.43
DDX54-203ENST00000546869 PRKXP51817 358 aa12.36□□□□□ -0.43
DDX54-203ENST00000546869 HCCSP53701 268 aa12.36□□□□□ -0.43
DDX54-203ENST00000546869 MRPS11P82912 194 aaKnown RBP12.36□□□□□ -0.43
DDX54-203ENST00000546869 EGR3Q06889 387 aa12.36□□□□□ -0.43
DDX54-203ENST00000546869 GK2Q14410 553 aaPredicted RBP12.36□□□□□ -0.43
DDX54-203ENST00000546869 ZMAT1Q5H9K5 638 aa12.36□□□□□ -0.43
DDX54-203ENST00000546869 TMEM255AQ5JRV8 349 aa12.36□□□□□ -0.43
DDX54-203ENST00000546869 FAM209AQ5JX71 171 aa12.36□□□□□ -0.43
DDX54-203ENST00000546869 ZNF691Q5VV52 312 aa12.36□□□□□ -0.43
DDX54-203ENST00000546869 SLC35F2Q8IXU6 374 aa12.36□□□□□ -0.43
DDX54-203ENST00000546869 DHRSXQ8N5I4 330 aa12.36□□□□□ -0.43
DDX54-203ENST00000546869 ZNF283Q8N7M2 679 aa12.36□□□□□ -0.43
DDX54-203ENST00000546869 WFDC11Q8NEX6 87 aa12.36□□□□□ -0.43
DDX54-203ENST00000546869 OR52H1Q8NGJ2 320 aa12.36□□□□□ -0.43
DDX54-203ENST00000546869 OR51G2Q8NGK0 314 aa12.36□□□□□ -0.43
DDX54-203ENST00000546869 ITFG2Q969R8 447 aa12.36□□□□□ -0.43
DDX54-203ENST00000546869 SPSB4Q96A44 273 aa12.36□□□□□ -0.43
DDX54-203ENST00000546869 OR8B4Q96RC9 309 aa12.36□□□□□ -0.43
DDX54-203ENST00000546869 REPIN1Q9BWE0 567 aaKnown RBP12.36□□□□□ -0.43
DDX54-203ENST00000546869 OPA3Q9H6K4 179 aa12.36□□□□□ -0.43
DDX54-203ENST00000546869 DNAJC27Q9NZQ0 273 aa12.36□□□□□ -0.43
DDX54-203ENST00000546869 ZDHHC8Q9ULC8 765 aa12.36□□□□□ -0.43
DDX54-203ENST00000546869 COPS3Q9UNS2 423 aa12.36□□□□□ -0.43
DDX54-203ENST00000546869 KLHDC2Q9Y2U9 406 aa12.36□□□□□ -0.43
DDX54-203ENST00000546869 PCDHGB1Q9Y5G3 927 aa12.36□□□□□ -0.43
DDX54-203ENST00000546869 ARID1AO14497 2285 aa12.35□□□□□ -0.43
DDX54-203ENST00000546869 ARFGEF3Q5TH69 2177 aa12.35□□□□□ -0.43
DDX54-203ENST00000546869 A0A1B0GWJ7 208 aa12.35□□□□□ -0.43
DDX54-203ENST00000546869 PLSCR5A0PG75 271 aa12.35□□□□□ -0.43
DDX54-203ENST00000546869 ZNF670-ZNF695F2Z2N8 137 aa12.35□□□□□ -0.43
DDX54-203ENST00000546869 J3QRE1 110 aa12.35□□□□□ -0.43
DDX54-203ENST00000546869 XRCC2O43543 280 aa12.35□□□□□ -0.43
DDX54-203ENST00000546869 SLC6A9P48067 706 aa12.35□□□□□ -0.43
DDX54-203ENST00000546869 CX3CR1P49238 355 aa12.35□□□□□ -0.43
DDX54-203ENST00000546869 CXCR4P61073 352 aa12.35□□□□□ -0.43
DDX54-203ENST00000546869 MAD2L1BPQ15013 274 aaPredicted RBP12.35□□□□□ -0.43
DDX54-203ENST00000546869 CLEC12BQ2HXU8 276 aa12.35□□□□□ -0.43
DDX54-203ENST00000546869 ZNF322Q6U7Q0 402 aaPredicted RBP12.35□□□□□ -0.43
DDX54-203ENST00000546869 SPATC1Q76KD6 591 aa12.35□□□□□ -0.43
DDX54-203ENST00000546869 KRT77Q7Z794 578 aa12.35□□□□□ -0.43
DDX54-203ENST00000546869 SETD9Q8NE22 299 aa12.35□□□□□ -0.43
DDX54-203ENST00000546869 OR8G5Q8NG78 346 aa12.35□□□□□ -0.43
DDX54-203ENST00000546869 RGCCQ9H4X1 137 aa12.35□□□□□ -0.43
DDX54-203ENST00000546869 MRPS18AQ9NVS2 196 aaKnown RBP12.35□□□□□ -0.43
DDX54-203ENST00000546869 ZNF391Q9UJN7 358 aa12.35□□□□□ -0.43
DDX54-203ENST00000546869 EXOGQ9Y2C4 368 aaKnown RBP12.35□□□□□ -0.43
DDX54-203ENST00000546869 LRP12Q9Y561 859 aa12.35□□□□□ -0.43
DDX54-203ENST00000546869 IQCF6A8MYZ5 107 aa12.34□□□□□ -0.43
DDX54-203ENST00000546869 NDUFS8O00217 210 aa12.34□□□□□ -0.43
DDX54-203ENST00000546869 SSX4O60224 188 aa12.34□□□□□ -0.43
DDX54-203ENST00000546869 SULT1C4O75897 302 aa12.34□□□□□ -0.43
DDX54-203ENST00000546869 CD55P08174 381 aa12.34□□□□□ -0.43
DDX54-203ENST00000546869 NAT2P11245 290 aa12.34□□□□□ -0.43
DDX54-203ENST00000546869 FOSL1P15407 271 aa12.34□□□□□ -0.43
DDX54-203ENST00000546869 CFL1P23528 166 aaKnown RBP12.34□□□□□ -0.43
DDX54-203ENST00000546869 ATP6V1E1P36543 226 aa12.34□□□□□ -0.43
DDX54-203ENST00000546869 CAPGP40121 348 aa12.34□□□□□ -0.43
DDX54-203ENST00000546869 ZNF81P51508 661 aa12.34□□□□□ -0.43
DDX54-203ENST00000546869 MMP16P51512 607 aa12.34□□□□□ -0.43
DDX54-203ENST00000546869 ISL1P61371 349 aa12.34□□□□□ -0.43
DDX54-203ENST00000546869 CDK5R2Q13319 367 aa12.34□□□□□ -0.43
DDX54-203ENST00000546869 HLXQ14774 488 aaPredicted RBP12.34□□□□□ -0.43
DDX54-203ENST00000546869 SNAI3Q3KNW1 292 aa12.34□□□□□ -0.43
DDX54-203ENST00000546869 ALKBH6Q3KRA9 238 aa12.34□□□□□ -0.43
DDX54-203ENST00000546869 ZNF684Q5T5D7 378 aa12.34□□□□□ -0.43
DDX54-203ENST00000546869 LRRN1Q6UXK5 716 aa12.34□□□□□ -0.43
DDX54-203ENST00000546869 USP51Q70EK9 711 aa12.34□□□□□ -0.43
DDX54-203ENST00000546869 PGAP1Q75T13 922 aa12.34□□□□□ -0.43
DDX54-203ENST00000546869 ZNF771Q7L3S4 317 aaPredicted RBP12.34□□□□□ -0.43
DDX54-203ENST00000546869 ZCCHC24Q8N2G6 241 aaKnown RBP12.34□□□□□ -0.43
DDX54-203ENST00000546869 ZNF786Q8N393 782 aa12.34□□□□□ -0.43
DDX54-203ENST00000546869 APH1BQ8WW43 257 aa12.34□□□□□ -0.43
DDX54-203ENST00000546869 NRG4Q8WWG1 115 aa12.34□□□□□ -0.43
DDX54-203ENST00000546869 ADI1Q9BV57 179 aa12.34□□□□□ -0.43
DDX54-203ENST00000546869 TMUB1Q9BVT8 246 aa12.34□□□□□ -0.43
DDX54-203ENST00000546869 PTTG3PQ9NZH4 202 aa12.34□□□□□ -0.43
DDX54-203ENST00000546869 RPL36Q9Y3U8 105 aaKnown RBP12.34□□□□□ -0.43
DDX54-203ENST00000546869 LOC390937A0A1W2PQ73 354 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms