RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 TMEM61Q8N0U2 210 aa4.1□□□□□ -1.75
NPAS3-204ENST00000546849 C4orf33Q8N1A6 199 aa4.1□□□□□ -1.75
NPAS3-204ENST00000546849 OR5B17Q8NGF7 314 aa4.1□□□□□ -1.75
NPAS3-204ENST00000546849 OR6X1Q8NH79 312 aa4.1□□□□□ -1.75
NPAS3-204ENST00000546849 NTAN1Q96AB6 310 aa4.1□□□□□ -1.75
NPAS3-204ENST00000546849 MED10Q9BTT4 135 aa4.1□□□□□ -1.75
NPAS3-204ENST00000546849 DRC3Q9H069 523 aa4.1□□□□□ -1.75
NPAS3-204ENST00000546849 ILKAPQ9H0C8 392 aaPredicted RBP4.1□□□□□ -1.75
NPAS3-204ENST00000546849 DHX35Q9H5Z1 703 aaKnown RBP4.1□□□□□ -1.75
NPAS3-204ENST00000546849 FN3KRPQ9HA64 309 aa4.1□□□□□ -1.75
NPAS3-204ENST00000546849 STX18Q9P2W9 335 aaKnown RBP4.1□□□□□ -1.75
NPAS3-204ENST00000546849 HEY1Q9Y5J3 304 aa4.1□□□□□ -1.75
NPAS3-204ENST00000546849 LRRK1Q38SD2 2015 aa4.1□□□□□ -1.75
NPAS3-204ENST00000546849 C5orf42Q9H799 3197 aa4.09□□□□□ -1.75
NPAS3-204ENST00000546849 FAM240BA0A1B0GVZ2 78 aa4.09□□□□□ -1.75
NPAS3-204ENST00000546849 ANKRD65E5RJM6 399 aa4.09□□□□□ -1.75
NPAS3-204ENST00000546849 HAS3O00219 553 aa4.09□□□□□ -1.75
NPAS3-204ENST00000546849 FCMRO60667 390 aa4.09□□□□□ -1.75
NPAS3-204ENST00000546849 KRT6AP02538 564 aa4.09□□□□□ -1.75
NPAS3-204ENST00000546849 MYL2P10916 166 aa4.09□□□□□ -1.75
NPAS3-204ENST00000546849 CD1CP29017 333 aa4.09□□□□□ -1.75
NPAS3-204ENST00000546849 RORAP35398 523 aa4.09□□□□□ -1.75
NPAS3-204ENST00000546849 RAP1GDS1P52306 607 aa4.09□□□□□ -1.75
NPAS3-204ENST00000546849 TPI1P60174 286 aa4.09□□□□□ -1.75
NPAS3-204ENST00000546849 NCALDP61601 193 aa4.09□□□□□ -1.75
NPAS3-204ENST00000546849 ACVR1Q04771 509 aa4.09□□□□□ -1.75
NPAS3-204ENST00000546849 SMARCB1Q12824 385 aa4.09□□□□□ -1.75
NPAS3-204ENST00000546849 CDH17Q12864 832 aa4.09□□□□□ -1.75
NPAS3-204ENST00000546849 STX5Q13190 355 aa4.09□□□□□ -1.75
NPAS3-204ENST00000546849 MED21Q13503 144 aa4.09□□□□□ -1.75
NPAS3-204ENST00000546849 PTPN20Q4JDL3 420 aa4.09□□□□□ -1.75
NPAS3-204ENST00000546849 BRMS1LQ5PSV4 323 aa4.09□□□□□ -1.75
NPAS3-204ENST00000546849 RFLNAQ6ZTI6 216 aa4.09□□□□□ -1.75
NPAS3-204ENST00000546849 PID1Q7Z2X4 250 aa4.09□□□□□ -1.75
NPAS3-204ENST00000546849 SLC22A9Q8IVM8 553 aa4.09□□□□□ -1.75
NPAS3-204ENST00000546849 UBE2J2Q8N2K1 259 aa4.09□□□□□ -1.75
NPAS3-204ENST00000546849 ARIH2OSQ8N7S6 290 aa4.09□□□□□ -1.75
NPAS3-204ENST00000546849 OR1N2Q8NGR9 330 aa4.09□□□□□ -1.75
NPAS3-204ENST00000546849 DDI1Q8WTU0 396 aa4.09□□□□□ -1.75
NPAS3-204ENST00000546849 PDCD6IPQ8WUM4 868 aaKnown RBP4.09□□□□□ -1.75
NPAS3-204ENST00000546849 QKIQ96PU8 341 aaKnown RBP eCLIP4.09□□□□□ -1.75
NPAS3-204ENST00000546849 TSC22D3Q99576 134 aa4.09□□□□□ -1.75
NPAS3-204ENST00000546849 TMEM246Q9BRR3 403 aa4.09□□□□□ -1.75
NPAS3-204ENST00000546849 NXF3Q9H4D5 531 aaKnown RBP4.09□□□□□ -1.75
NPAS3-204ENST00000546849 MRM3Q9HC36 420 aaKnown RBP4.09□□□□□ -1.75
NPAS3-204ENST00000546849 ZNF331Q9NQX6 463 aaPredicted RBP4.09□□□□□ -1.75
NPAS3-204ENST00000546849 DCAF16Q9NXF7 216 aa4.09□□□□□ -1.75
NPAS3-204ENST00000546849 SUN2Q9UH99 717 aa4.09□□□□□ -1.75
NPAS3-204ENST00000546849 AP3M1Q9Y2T2 418 aa4.09□□□□□ -1.75
NPAS3-204ENST00000546849 FLNBO75369 2602 aaKnown RBP4.09□□□□□ -1.75
NPAS3-204ENST00000546849 ZNF646O15015 1829 aaPredicted RBP4.09□□□□□ -1.76
NPAS3-204ENST00000546849 DCHS1Q96JQ0 3298 aa4.08□□□□□ -1.76
NPAS3-204ENST00000546849 CDH23Q9H251 3354 aa4.08□□□□□ -1.76
NPAS3-204ENST00000546849 FAM159BA6NKW6 160 aa4.08□□□□□ -1.76
NPAS3-204ENST00000546849 TRAF3IP2O43734 574 aaPredicted RBP4.08□□□□□ -1.76
NPAS3-204ENST00000546849 SMIM24O75264 130 aa4.08□□□□□ -1.76
NPAS3-204ENST00000546849 ALDOBP05062 364 aa4.08□□□□□ -1.76
NPAS3-204ENST00000546849 CAPN1P07384 714 aa4.08□□□□□ -1.76
NPAS3-204ENST00000546849 BPGMP07738 259 aa4.08□□□□□ -1.76
NPAS3-204ENST00000546849 RPSAP08865 295 aaKnown RBP4.08□□□□□ -1.76
NPAS3-204ENST00000546849 RBP1P09455 135 aa4.08□□□□□ -1.76
NPAS3-204ENST00000546849 RALBP11234 206 aa4.08□□□□□ -1.76
NPAS3-204ENST00000546849 KCNE1P15382 129 aa4.08□□□□□ -1.76
NPAS3-204ENST00000546849 MDKP21741 143 aaPredicted RBP4.08□□□□□ -1.76
NPAS3-204ENST00000546849 WARSP23381 471 aaKnown RBP4.08□□□□□ -1.76
NPAS3-204ENST00000546849 OPRD1P41143 372 aa4.08□□□□□ -1.76
NPAS3-204ENST00000546849 SULT1E1P49888 294 aa4.08□□□□□ -1.76
NPAS3-204ENST00000546849 PAFAH1B3Q15102 231 aaKnown RBP4.08□□□□□ -1.76
NPAS3-204ENST00000546849 FAM83EQ2M2I3 478 aa4.08□□□□□ -1.76
NPAS3-204ENST00000546849 TWF2Q6IBS0 349 aaKnown RBP4.08□□□□□ -1.76
NPAS3-204ENST00000546849 PRMT9Q6P2P2 845 aa4.08□□□□□ -1.76
NPAS3-204ENST00000546849 UQCC3Q6UW78 93 aa4.08□□□□□ -1.76
NPAS3-204ENST00000546849 ACP7Q6ZNF0 438 aa4.08□□□□□ -1.76
NPAS3-204ENST00000546849 FAM183BPQ6ZVS7 135 aa4.08□□□□□ -1.76
NPAS3-204ENST00000546849 H2BFWTQ7Z2G1 175 aa4.08□□□□□ -1.76
NPAS3-204ENST00000546849 TRIM69Q86WT6 500 aa4.08□□□□□ -1.76
NPAS3-204ENST00000546849 FAM9CQ8IZT9 166 aa4.08□□□□□ -1.76
NPAS3-204ENST00000546849 RNF139Q8WU17 664 aa4.08□□□□□ -1.76
NPAS3-204ENST00000546849 DCAKDQ8WVC6 231 aa4.08□□□□□ -1.76
NPAS3-204ENST00000546849 C10orf82Q8WW14 230 aa4.08□□□□□ -1.76
NPAS3-204ENST00000546849 ACOT11Q8WXI4 607 aaPredicted RBP4.08□□□□□ -1.76
NPAS3-204ENST00000546849 LZICQ8WZA0 190 aa4.08□□□□□ -1.76
NPAS3-204ENST00000546849 PEX13Q92968 403 aa4.08□□□□□ -1.76
NPAS3-204ENST00000546849 TOP1MTQ969P6 601 aa4.08□□□□□ -1.76
NPAS3-204ENST00000546849 SMARCD1Q96GM5 515 aa4.08□□□□□ -1.76
NPAS3-204ENST00000546849 OXGR1Q96P68 337 aa4.08□□□□□ -1.76
NPAS3-204ENST00000546849 OR2M2Q96R28 347 aa4.08□□□□□ -1.76
NPAS3-204ENST00000546849 SH3GL3Q99963 347 aa4.08□□□□□ -1.76
NPAS3-204ENST00000546849 ECSITQ9BQ95 431 aa4.08□□□□□ -1.76
NPAS3-204ENST00000546849 RIOK2Q9BVS4 552 aaKnown RBP4.08□□□□□ -1.76
NPAS3-204ENST00000546849 SRMSQ9H3Y6 488 aa4.08□□□□□ -1.76
NPAS3-204ENST00000546849 FBXO44Q9H4M3 255 aa4.08□□□□□ -1.76
NPAS3-204ENST00000546849 CLMPQ9H6B4 373 aa4.08□□□□□ -1.76
NPAS3-204ENST00000546849 EFCAB1Q9HAE3 211 aa4.08□□□□□ -1.76
NPAS3-204ENST00000546849 EURLQ9NYK6 297 aa4.08□□□□□ -1.76
NPAS3-204ENST00000546849 DEC1Q9P2X7 70 aa4.08□□□□□ -1.76
NPAS3-204ENST00000546849 VANGL2Q9ULK5 521 aa4.08□□□□□ -1.76
NPAS3-204ENST00000546849 LRRC42Q9Y546 428 aa4.08□□□□□ -1.76
NPAS3-204ENST00000546849 TRBV6-6A0A0A6YYG2 114 aa4.07□□□□□ -1.76
NPAS3-204ENST00000546849 A0A0G2JN53 185 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms