RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 SH3GLB1Q9Y371 365 aa10.48□□□□□ -0.73
SCAF11-208ENST00000546534 NOTCH3Q9UM47 2321 aa10.48□□□□□ -0.73
SCAF11-208ENST00000546534 TRAV27A0A087WT01 109 aa10.47□□□□□ -0.73
SCAF11-208ENST00000546534 TMEM120BA0PK00 339 aa10.47□□□□□ -0.73
SCAF11-208ENST00000546534 ANKRD61A6NGH8 418 aa10.47□□□□□ -0.73
SCAF11-208ENST00000546534 A6NHS1 94 aa10.47□□□□□ -0.73
SCAF11-208ENST00000546534 RER1O15258 196 aa10.47□□□□□ -0.73
SCAF11-208ENST00000546534 OR10H3O60404 316 aa10.47□□□□□ -0.73
SCAF11-208ENST00000546534 IFI30P13284 250 aa10.47□□□□□ -0.73
SCAF11-208ENST00000546534 CD200P41217 278 aa10.47□□□□□ -0.73
SCAF11-208ENST00000546534 FHL1Q13642 323 aa10.47□□□□□ -0.73
SCAF11-208ENST00000546534 KCNJ8Q15842 424 aa10.47□□□□□ -0.73
SCAF11-208ENST00000546534 MICU2Q8IYU8 434 aa10.47□□□□□ -0.73
SCAF11-208ENST00000546534 OR51A7Q8NH64 312 aa10.47□□□□□ -0.73
SCAF11-208ENST00000546534 CFHR4Q92496 578 aa10.47□□□□□ -0.73
SCAF11-208ENST00000546534 KAT8Q9H7Z6 458 aaKnown RBP10.47□□□□□ -0.73
SCAF11-208ENST00000546534 ATPIF1Q9UII2 106 aa10.47□□□□□ -0.73
SCAF11-208ENST00000546534 CAB39Q9Y376 341 aaPredicted RBP10.47□□□□□ -0.73
SCAF11-208ENST00000546534 ELOA3CA0A087WX78 387 aaPredicted RBP10.46□□□□□ -0.73
SCAF11-208ENST00000546534 RNASEK-C17orf49H0YIS7 233 aa10.46□□□□□ -0.73
SCAF11-208ENST00000546534 DVL1O14640 695 aa10.46□□□□□ -0.73
SCAF11-208ENST00000546534 POLR3GO15318 223 aaPredicted RBP10.46□□□□□ -0.73
SCAF11-208ENST00000546534 CTLA4P16410 223 aa10.46□□□□□ -0.73
SCAF11-208ENST00000546534 EFNB2P52799 333 aa10.46□□□□□ -0.73
SCAF11-208ENST00000546534 PRB3Q04118 309 aaPredicted RBP10.46□□□□□ -0.73
SCAF11-208ENST00000546534 OR8B8Q15620 311 aa10.46□□□□□ -0.73
SCAF11-208ENST00000546534 CDONQ4KMG0 1287 aa10.46□□□□□ -0.73
SCAF11-208ENST00000546534 BEND6Q5SZJ8 279 aaPredicted RBP10.46□□□□□ -0.73
SCAF11-208ENST00000546534 C11orf87Q6NUJ2 197 aa10.46□□□□□ -0.73
SCAF11-208ENST00000546534 C1orf122Q6ZSJ8 110 aa10.46□□□□□ -0.73
SCAF11-208ENST00000546534 CCDC80Q76M96 950 aa10.46□□□□□ -0.73
SCAF11-208ENST00000546534 DHDDSQ86SQ9 333 aa10.46□□□□□ -0.73
SCAF11-208ENST00000546534 MREGQ8N565 214 aa10.46□□□□□ -0.73
SCAF11-208ENST00000546534 RASSF5Q8WWW0 418 aa10.46□□□□□ -0.73
SCAF11-208ENST00000546534 CGREF1Q99674 301 aa10.46□□□□□ -0.73
SCAF11-208ENST00000546534 HCAR1Q9BXC0 346 aa10.46□□□□□ -0.73
SCAF11-208ENST00000546534 POLR2J2Q9GZM3 115 aaKnown RBP10.46□□□□□ -0.73
SCAF11-208ENST00000546534 POLR2J3Q9H1A7 115 aaKnown RBP10.46□□□□□ -0.73
SCAF11-208ENST00000546534 CNTD2Q9H8S5 307 aa10.46□□□□□ -0.73
SCAF11-208ENST00000546534 ADAM18Q9Y3Q7 739 aa10.46□□□□□ -0.73
SCAF11-208ENST00000546534 KPTNQ9Y664 436 aa10.46□□□□□ -0.73
SCAF11-208ENST00000546534 TEX13CA0A0J9YWL9 993 aa10.45□□□□□ -0.74
SCAF11-208ENST00000546534 A0A1B0GVI7 797 aa10.45□□□□□ -0.74
SCAF11-208ENST00000546534 A0A1W2PRD5 423 aa10.45□□□□□ -0.74
SCAF11-208ENST00000546534 A0A1W2PRF3 423 aa10.45□□□□□ -0.74
SCAF11-208ENST00000546534 A0A1W2PRM7 423 aa10.45□□□□□ -0.74
SCAF11-208ENST00000546534 NDUFA2O43678 99 aa10.45□□□□□ -0.74
SCAF11-208ENST00000546534 XPNPEP2O43895 674 aa10.45□□□□□ -0.74
SCAF11-208ENST00000546534 ECDO95905 644 aaPredicted RBP10.45□□□□□ -0.74
SCAF11-208ENST00000546534 GYPAP02724 150 aa10.45□□□□□ -0.74
SCAF11-208ENST00000546534 OR1E2P47887 323 aa10.45□□□□□ -0.74
SCAF11-208ENST00000546534 LSM6P62312 80 aaKnown RBP10.45□□□□□ -0.74
SCAF11-208ENST00000546534 VMACQ2NL98 169 aa10.45□□□□□ -0.74
SCAF11-208ENST00000546534 MESTQ5EB52 335 aa10.45□□□□□ -0.74
SCAF11-208ENST00000546534 COLCA1Q6ZS62 124 aa10.45□□□□□ -0.74
SCAF11-208ENST00000546534 LYG1Q8N1E2 194 aa10.45□□□□□ -0.74
SCAF11-208ENST00000546534 FGFRL1Q8N441 504 aa10.45□□□□□ -0.74
SCAF11-208ENST00000546534 KLHDC1Q8N7A1 406 aa10.45□□□□□ -0.74
SCAF11-208ENST00000546534 OR10A6Q8NH74 314 aa10.45□□□□□ -0.74
SCAF11-208ENST00000546534 OR5R1Q8NH85 324 aa10.45□□□□□ -0.74
SCAF11-208ENST00000546534 PPP1R35Q8TAP8 253 aa10.45□□□□□ -0.74
SCAF11-208ENST00000546534 NPRL2Q8WTW4 380 aa10.45□□□□□ -0.74
SCAF11-208ENST00000546534 EDARADDQ8WWZ3 215 aa10.45□□□□□ -0.74
SCAF11-208ENST00000546534 PHF21AQ96BD5 680 aa10.45□□□□□ -0.74
SCAF11-208ENST00000546534 Q96M85 177 aa10.45□□□□□ -0.74
SCAF11-208ENST00000546534 EBF4Q9BQW3 602 aa10.45□□□□□ -0.74
SCAF11-208ENST00000546534 RERGLQ9H628 205 aa10.45□□□□□ -0.74
SCAF11-208ENST00000546534 FN3KRPQ9HA64 309 aa10.45□□□□□ -0.74
SCAF11-208ENST00000546534 SIRT7Q9NRC8 400 aa10.45□□□□□ -0.74
SCAF11-208ENST00000546534 GRHPRQ9UBQ7 328 aa10.45□□□□□ -0.74
SCAF11-208ENST00000546534 RPUSD1Q9UJJ7 312 aaKnown RBP10.45□□□□□ -0.74
SCAF11-208ENST00000546534 COA3Q9Y2R0 106 aaPredicted RBP10.45□□□□□ -0.74
SCAF11-208ENST00000546534 TRAV38-1A0A0B4J264 116 aa10.44□□□□□ -0.74
SCAF11-208ENST00000546534 PRSS37A4D1T9 235 aa10.44□□□□□ -0.74
SCAF11-208ENST00000546534 OOEPA6NGQ2 149 aa10.44□□□□□ -0.74
SCAF11-208ENST00000546534 NPFFO15130 113 aa10.44□□□□□ -0.74
SCAF11-208ENST00000546534 GZMMP51124 257 aa10.44□□□□□ -0.74
SCAF11-208ENST00000546534 DLX1P56177 255 aa10.44□□□□□ -0.74
SCAF11-208ENST00000546534 GK2Q14410 553 aaPredicted RBP10.44□□□□□ -0.74
SCAF11-208ENST00000546534 OR8G1Q15617 311 aa10.44□□□□□ -0.74
SCAF11-208ENST00000546534 RSPO1Q2MKA7 263 aaPredicted RBP10.44□□□□□ -0.74
SCAF11-208ENST00000546534 METAP1DQ6UB28 335 aaPredicted RBP10.44□□□□□ -0.74
SCAF11-208ENST00000546534 OAFQ86UD1 273 aa10.44□□□□□ -0.74
SCAF11-208ENST00000546534 FAM90A1Q86YD7 464 aa10.44□□□□□ -0.74
SCAF11-208ENST00000546534 OR13C2Q8NGS9 318 aa10.44□□□□□ -0.74
SCAF11-208ENST00000546534 ST8SIA4Q92187 359 aa10.44□□□□□ -0.74
SCAF11-208ENST00000546534 ZNF583Q96ND8 569 aa10.44□□□□□ -0.74
SCAF11-208ENST00000546534 TRIM36Q9NQ86 728 aa10.44□□□□□ -0.74
SCAF11-208ENST00000546534 ONECUT1Q9UBC0 465 aa10.44□□□□□ -0.74
SCAF11-208ENST00000546534 DNAJB11Q9UBS4 358 aa10.44□□□□□ -0.74
SCAF11-208ENST00000546534 BAG5Q9UL15 447 aa10.44□□□□□ -0.74
SCAF11-208ENST00000546534 A0A1B0GW55 424 aa10.43□□□□□ -0.74
SCAF11-208ENST00000546534 HTR3EA5X5Y0 456 aa10.43□□□□□ -0.74
SCAF11-208ENST00000546534 EFCAB9A8MZ26 197 aa10.43□□□□□ -0.74
SCAF11-208ENST00000546534 XKRYO14609 159 aa10.43□□□□□ -0.74
SCAF11-208ENST00000546534 IMPA2O14732 288 aa10.43□□□□□ -0.74
SCAF11-208ENST00000546534 AHCYL1O43865 530 aa10.43□□□□□ -0.74
SCAF11-208ENST00000546534 SLC16A7O60669 478 aa10.43□□□□□ -0.74
SCAF11-208ENST00000546534 PTBP3O95758 552 aaKnown RBP10.43□□□□□ -0.74
SCAF11-208ENST00000546534 DUX4L2P0CJ85 424 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms