RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 ARL5BQ96KC2 179 aa13.14□□□□□ -0.31
HOXC11-202ENST00000546378 DUSP15Q9H1R2 295 aaPredicted RBP13.14□□□□□ -0.31
HOXC11-202ENST00000546378 CNTD2Q9H8S5 307 aa13.14□□□□□ -0.31
HOXC11-202ENST00000546378 ZNF175Q9Y473 711 aa13.14□□□□□ -0.31
HOXC11-202ENST00000546378 SYT7O43581 403 aa13.13□□□□□ -0.31
HOXC11-202ENST00000546378 ZNF354AO60765 605 aaPredicted RBP13.13□□□□□ -0.31
HOXC11-202ENST00000546378 OR2A4O95047 310 aa13.13□□□□□ -0.31
HOXC11-202ENST00000546378 DIRAS3O95661 229 aa13.13□□□□□ -0.31
HOXC11-202ENST00000546378 OR13C7P0DN81 318 aa13.13□□□□□ -0.31
HOXC11-202ENST00000546378 SERPINA2P20848 420 aa13.13□□□□□ -0.31
HOXC11-202ENST00000546378 GLRA1P23415 457 aa13.13□□□□□ -0.31
HOXC11-202ENST00000546378 FOXK1P85037 733 aa13.13□□□□□ -0.31
HOXC11-202ENST00000546378 TSPO2Q5TGU0 170 aa13.13□□□□□ -0.31
HOXC11-202ENST00000546378 SVBPQ8N300 66 aa13.13□□□□□ -0.31
HOXC11-202ENST00000546378 HSD17B11Q8NBQ5 300 aa13.13□□□□□ -0.31
HOXC11-202ENST00000546378 ZC3H10Q96K80 434 aaKnown RBP13.13□□□□□ -0.31
HOXC11-202ENST00000546378 OR2A7Q96R45 310 aa13.13□□□□□ -0.31
HOXC11-202ENST00000546378 OR5AC2Q9NZP5 309 aa13.13□□□□□ -0.31
HOXC11-202ENST00000546378 PRODH2Q9UF12 536 aa13.13□□□□□ -0.31
HOXC11-202ENST00000546378 F5H5K5 113 aa13.13□□□□□ -0.31
HOXC11-202ENST00000546378 TXNDC12O95881 172 aa13.13□□□□□ -0.31
HOXC11-202ENST00000546378 THEGLP0DJG4 465 aa13.13□□□□□ -0.31
HOXC11-202ENST00000546378 NQO2P16083 231 aa13.13□□□□□ -0.31
HOXC11-202ENST00000546378 ADCYAP1P18509 176 aa13.13□□□□□ -0.31
HOXC11-202ENST00000546378 GABRR1P24046 479 aa13.13□□□□□ -0.31
HOXC11-202ENST00000546378 PLCXD2Q0VAA5 305 aa13.13□□□□□ -0.31
HOXC11-202ENST00000546378 MGAT2Q10469 447 aa13.13□□□□□ -0.31
HOXC11-202ENST00000546378 ELOCQ15369 112 aa13.13□□□□□ -0.31
HOXC11-202ENST00000546378 INPP5JQ15735 1006 aaPredicted RBP13.13□□□□□ -0.31
HOXC11-202ENST00000546378 NCMAPQ5T1S8 102 aa13.13□□□□□ -0.31
HOXC11-202ENST00000546378 CPEB2Q7Z5Q1 589 aaKnown RBP13.13□□□□□ -0.31
HOXC11-202ENST00000546378 ZNF248Q8NDW4 579 aa13.13□□□□□ -0.31
HOXC11-202ENST00000546378 OR4K15Q8NH41 348 aa13.13□□□□□ -0.31
HOXC11-202ENST00000546378 SECTM1Q8WVN6 248 aa13.13□□□□□ -0.31
HOXC11-202ENST00000546378 ATG2AQ2TAZ0 1938 aa13.13□□□□□ -0.31
HOXC11-202ENST00000546378 METTL21EPA6NDL7 271 aa13.12□□□□□ -0.31
HOXC11-202ENST00000546378 TMEM212A6NML5 194 aa13.12□□□□□ -0.31
HOXC11-202ENST00000546378 LINC00587B1AMM8 73 aa13.12□□□□□ -0.31
HOXC11-202ENST00000546378 CPN1P15169 458 aa13.12□□□□□ -0.31
HOXC11-202ENST00000546378 MGMTP16455 207 aa13.12□□□□□ -0.31
HOXC11-202ENST00000546378 FHL5Q5TD97 284 aa13.12□□□□□ -0.31
HOXC11-202ENST00000546378 SHEQ5VZ18 495 aa13.12□□□□□ -0.31
HOXC11-202ENST00000546378 RPL7L1Q6DKI1 246 aaKnown RBP13.12□□□□□ -0.31
HOXC11-202ENST00000546378 JMJD6Q6NYC1 403 aaPredicted RBP13.12□□□□□ -0.31
HOXC11-202ENST00000546378 CCDC36Q8IYA8 594 aa13.12□□□□□ -0.31
HOXC11-202ENST00000546378 PNLDC1Q8NA58 520 aaKnown RBP13.12□□□□□ -0.31
HOXC11-202ENST00000546378 FBXO7Q9Y3I1 522 aa13.12□□□□□ -0.31
HOXC11-202ENST00000546378 NPTNQ9Y639 398 aa13.12□□□□□ -0.31
HOXC11-202ENST00000546378 TEX13DA0A0J9YY54 714 aaPredicted RBP13.12□□□□□ -0.31
HOXC11-202ENST00000546378 TMEM218A2RU14 115 aa13.12□□□□□ -0.31
HOXC11-202ENST00000546378 NKX2-2O95096 273 aa13.12□□□□□ -0.31
HOXC11-202ENST00000546378 SLC35E2P0CK97 266 aa13.12□□□□□ -0.31
HOXC11-202ENST00000546378 DHPSP49366 369 aaPredicted RBP13.12□□□□□ -0.31
HOXC11-202ENST00000546378 RPS27AP62979 156 aaKnown RBP13.12□□□□□ -0.31
HOXC11-202ENST00000546378 UBA52P62987 128 aaKnown RBP13.12□□□□□ -0.31
HOXC11-202ENST00000546378 C14orf28Q4W4Y0 310 aa13.12□□□□□ -0.31
HOXC11-202ENST00000546378 OVCH2Q7RTZ1 564 aa13.12□□□□□ -0.31
HOXC11-202ENST00000546378 OR13C8Q8NGS7 320 aa13.12□□□□□ -0.31
HOXC11-202ENST00000546378 RRNAD1Q96FB5 475 aaKnown RBP13.12□□□□□ -0.31
HOXC11-202ENST00000546378 G6PC3Q9BUM1 346 aa13.12□□□□□ -0.31
HOXC11-202ENST00000546378 TAS2R8Q9NYW2 309 aa13.12□□□□□ -0.31
HOXC11-202ENST00000546378 RFNGQ9Y644 331 aa13.12□□□□□ -0.31
HOXC11-202ENST00000546378 GPR179Q6PRD1 2367 aa13.12□□□□□ -0.31
HOXC11-202ENST00000546378 NPIPA5E9PKD4 350 aa13.12□□□□□ -0.31
HOXC11-202ENST00000546378 GP1BAP07359 652 aa13.12□□□□□ -0.31
HOXC11-202ENST00000546378 ZNF20P17024 532 aa13.12□□□□□ -0.31
HOXC11-202ENST00000546378 GALP22466 123 aa13.12□□□□□ -0.31
HOXC11-202ENST00000546378 SLC17A1Q14916 467 aa13.12□□□□□ -0.31
HOXC11-202ENST00000546378 KIR2DS3Q14952 304 aa13.12□□□□□ -0.31
HOXC11-202ENST00000546378 PEA15Q15121 130 aa13.12□□□□□ -0.31
HOXC11-202ENST00000546378 ELFN2Q5R3F8 820 aa13.12□□□□□ -0.31
HOXC11-202ENST00000546378 WBP2NLQ6ICG8 309 aa13.12□□□□□ -0.31
HOXC11-202ENST00000546378 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.12□□□□□ -0.31
HOXC11-202ENST00000546378 LMX1AQ8TE12 382 aa13.12□□□□□ -0.31
HOXC11-202ENST00000546378 CLCC1Q96S66 551 aa13.12□□□□□ -0.31
HOXC11-202ENST00000546378 PRMT8Q9NR22 394 aaPredicted RBP13.12□□□□□ -0.31
HOXC11-202ENST00000546378 NPIPA1Q9UND3 350 aa13.12□□□□□ -0.31
HOXC11-202ENST00000546378 PUS1Q9Y606 427 aaKnown RBP eCLIP13.12□□□□□ -0.31
HOXC11-202ENST00000546378 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.11□□□□□ -0.31
HOXC11-202ENST00000546378 SOCS1O15524 211 aa13.11□□□□□ -0.31
HOXC11-202ENST00000546378 PMS2P2O95744 297 aa13.11□□□□□ -0.31
HOXC11-202ENST00000546378 AMY2BP19961 511 aa13.11□□□□□ -0.31
HOXC11-202ENST00000546378 HSD11B1P28845 292 aa13.11□□□□□ -0.31
HOXC11-202ENST00000546378 OPRM1P35372 400 aa13.11□□□□□ -0.31
HOXC11-202ENST00000546378 RAG2P55895 527 aa13.11□□□□□ -0.31
HOXC11-202ENST00000546378 ZNF117Q03924 483 aa13.11□□□□□ -0.31
HOXC11-202ENST00000546378 C9orf152Q5JTZ5 239 aa13.11□□□□□ -0.31
HOXC11-202ENST00000546378 ZNF679Q8IYX0 411 aa13.11□□□□□ -0.31
HOXC11-202ENST00000546378 VSTM2LQ96N03 204 aa13.11□□□□□ -0.31
HOXC11-202ENST00000546378 RASL12Q9NYN1 266 aa13.11□□□□□ -0.31
HOXC11-202ENST00000546378 SERTAD3Q9UJW9 196 aa13.11□□□□□ -0.31
HOXC11-202ENST00000546378 DCHS1Q96JQ0 3298 aa13.11□□□□□ -0.31
HOXC11-202ENST00000546378 IGKV1D-43A0A0B4J1Z2 117 aa13.11□□□□□ -0.31
HOXC11-202ENST00000546378 A0A1W2PNR3 127 aa13.11□□□□□ -0.31
HOXC11-202ENST00000546378 RNF222A6NCQ9 220 aa13.11□□□□□ -0.31
HOXC11-202ENST00000546378 SHISA7A6NL88 538 aa13.11□□□□□ -0.31
HOXC11-202ENST00000546378 SIGLEC6O43699 453 aa13.11□□□□□ -0.31
HOXC11-202ENST00000546378 GAAP10253 952 aa13.11□□□□□ -0.31
HOXC11-202ENST00000546378 GP1BBP13224 206 aa13.11□□□□□ -0.31
HOXC11-202ENST00000546378 RAB13P51153 203 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms