RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 APOL3O95236 402 aa5.47□□□□□ -1.53
PRKDC-211ENST00000546304 PTHP01270 115 aa5.47□□□□□ -1.53
PRKDC-211ENST00000546304 CRYAAP02489 173 aa5.47□□□□□ -1.53
PRKDC-211ENST00000546304 COX5BP10606 129 aa5.47□□□□□ -1.53
PRKDC-211ENST00000546304 NAT1P18440 290 aa5.47□□□□□ -1.53
PRKDC-211ENST00000546304 APEX1P27695 318 aaKnown RBP5.47□□□□□ -1.53
PRKDC-211ENST00000546304 SSTR2P30874 369 aa5.47□□□□□ -1.53
PRKDC-211ENST00000546304 APLNRP35414 380 aa5.47□□□□□ -1.53
PRKDC-211ENST00000546304 NUDT6P53370 316 aa5.47□□□□□ -1.53
PRKDC-211ENST00000546304 HIST1H3AP68431 136 aa5.47□□□□□ -1.53
PRKDC-211ENST00000546304 PSG4Q00888 419 aa5.47□□□□□ -1.53
PRKDC-211ENST00000546304 TLE4Q04727 773 aa5.47□□□□□ -1.53
PRKDC-211ENST00000546304 TMED1Q13445 227 aa5.47□□□□□ -1.53
PRKDC-211ENST00000546304 MAD2L1BPQ15013 274 aaPredicted RBP5.47□□□□□ -1.53
PRKDC-211ENST00000546304 TBC1D28Q2M2D7 210 aa5.47□□□□□ -1.53
PRKDC-211ENST00000546304 TEX30Q5JUR7 227 aa5.47□□□□□ -1.53
PRKDC-211ENST00000546304 ELFN2Q5R3F8 820 aa5.47□□□□□ -1.53
PRKDC-211ENST00000546304 SLC25A30Q5SVS4 291 aa5.47□□□□□ -1.53
PRKDC-211ENST00000546304 HIST2H3PS2Q5TEC6 136 aa5.47□□□□□ -1.53
PRKDC-211ENST00000546304 SLC22A25Q6T423 547 aa5.47□□□□□ -1.53
PRKDC-211ENST00000546304 ZNF704Q6ZNC4 412 aaPredicted RBP5.47□□□□□ -1.53
PRKDC-211ENST00000546304 USP51Q70EK9 711 aa5.47□□□□□ -1.53
PRKDC-211ENST00000546304 HIST2H3AQ71DI3 136 aa5.47□□□□□ -1.53
PRKDC-211ENST00000546304 MEPCEQ7L2J0 689 aaKnown RBP5.47□□□□□ -1.53
PRKDC-211ENST00000546304 SLC16A9Q7RTY1 509 aa5.47□□□□□ -1.53
PRKDC-211ENST00000546304 DPY19L4Q7Z388 723 aa5.47□□□□□ -1.53
PRKDC-211ENST00000546304 DCXRQ7Z4W1 244 aa5.47□□□□□ -1.53
PRKDC-211ENST00000546304 RFLNBQ8N5W9 214 aa5.47□□□□□ -1.53
PRKDC-211ENST00000546304 CPEB3Q8NE35 698 aaKnown RBP5.47□□□□□ -1.53
PRKDC-211ENST00000546304 GJC3Q8NFK1 279 aa5.47□□□□□ -1.53
PRKDC-211ENST00000546304 OR51G2Q8NGK0 314 aa5.47□□□□□ -1.53
PRKDC-211ENST00000546304 OR10S1Q8NGN2 331 aa5.47□□□□□ -1.53
PRKDC-211ENST00000546304 OR2AJ1Q8NGZ0 328 aa5.47□□□□□ -1.53
PRKDC-211ENST00000546304 RHOXF1Q8NHV9 184 aa5.47□□□□□ -1.53
PRKDC-211ENST00000546304 OTOSQ8NHW6 89 aa5.47□□□□□ -1.53
PRKDC-211ENST00000546304 CNIH3Q8TBE1 160 aa5.47□□□□□ -1.53
PRKDC-211ENST00000546304 ST7LQ8TDW4 575 aa5.47□□□□□ -1.53
PRKDC-211ENST00000546304 Q96MT0 163 aa5.47□□□□□ -1.53
PRKDC-211ENST00000546304 ZNF184Q99676 751 aaPredicted RBP5.47□□□□□ -1.53
PRKDC-211ENST00000546304 COQ7Q99807 217 aa5.47□□□□□ -1.53
PRKDC-211ENST00000546304 ATF6BQ99941 703 aa5.47□□□□□ -1.53
PRKDC-211ENST00000546304 TMEM204Q9BSN7 226 aa5.47□□□□□ -1.53
PRKDC-211ENST00000546304 COPS4Q9BT78 406 aa5.47□□□□□ -1.53
PRKDC-211ENST00000546304 ANKRD60Q9BZ19 345 aa5.47□□□□□ -1.53
PRKDC-211ENST00000546304 CDH20Q9HBT6 801 aa5.47□□□□□ -1.53
PRKDC-211ENST00000546304 ADGRL4Q9HBW9 690 aa5.47□□□□□ -1.53
PRKDC-211ENST00000546304 PNRC2Q9NPJ4 139 aaKnown RBP5.47□□□□□ -1.53
PRKDC-211ENST00000546304 DDX28Q9NUL7 540 aaKnown RBP5.47□□□□□ -1.53
PRKDC-211ENST00000546304 H2AFY2Q9P0M6 372 aaPredicted RBP5.47□□□□□ -1.53
PRKDC-211ENST00000546304 AASSQ9UDR5 926 aa5.47□□□□□ -1.53
PRKDC-211ENST00000546304 WARS2Q9UGM6 360 aaKnown RBP5.47□□□□□ -1.53
PRKDC-211ENST00000546304 POU2F3Q9UKI9 436 aa5.47□□□□□ -1.53
PRKDC-211ENST00000546304 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.47□□□□□ -1.53
PRKDC-211ENST00000546304 KLHDC2Q9Y2U9 406 aa5.47□□□□□ -1.53
PRKDC-211ENST00000546304 TIMM10BQ9Y5J6 103 aa5.47□□□□□ -1.53
PRKDC-211ENST00000546304 HSPE1-MOB4S4R3N1 261 aa5.47□□□□□ -1.53
PRKDC-211ENST00000546304 CELSR1Q9NYQ6 3014 aa5.47□□□□□ -1.53
PRKDC-211ENST00000546304 VPS13CQ709C8 3753 aa5.46□□□□□ -1.53
PRKDC-211ENST00000546304 A0A1W2PPR1 153 aa5.46□□□□□ -1.54
PRKDC-211ENST00000546304 C5orf49A4QMS7 147 aa5.46□□□□□ -1.54
PRKDC-211ENST00000546304 SHISA9B4DS77 424 aa5.46□□□□□ -1.54
PRKDC-211ENST00000546304 ZNF878C9JN71 531 aa5.46□□□□□ -1.54
PRKDC-211ENST00000546304 ZNF593O00488 134 aaPredicted RBP5.46□□□□□ -1.54
PRKDC-211ENST00000546304 TMCC2O75069 709 aa5.46□□□□□ -1.54
PRKDC-211ENST00000546304 WBP4O75554 376 aaKnown RBP5.46□□□□□ -1.54
PRKDC-211ENST00000546304 ABHD16AO95870 558 aa5.46□□□□□ -1.54
PRKDC-211ENST00000546304 LYNP07948 512 aa5.46□□□□□ -1.54
PRKDC-211ENST00000546304 SBK2P0C263 348 aa5.46□□□□□ -1.54
PRKDC-211ENST00000546304 DBTP11182 482 aaKnown RBP5.46□□□□□ -1.54
PRKDC-211ENST00000546304 CCL2P13500 99 aa5.46□□□□□ -1.54
PRKDC-211ENST00000546304 FAHP16930 419 aa5.46□□□□□ -1.54
PRKDC-211ENST00000546304 STOMP27105 288 aa5.46□□□□□ -1.54
PRKDC-211ENST00000546304 CALCRP30988 508 aa5.46□□□□□ -1.54
PRKDC-211ENST00000546304 MTNR1AP48039 350 aa5.46□□□□□ -1.54
PRKDC-211ENST00000546304 GDI2P50395 445 aaKnown RBP5.46□□□□□ -1.54
PRKDC-211ENST00000546304 ISL1P61371 349 aa5.46□□□□□ -1.54
PRKDC-211ENST00000546304 ACTC1P68032 377 aa5.46□□□□□ -1.54
PRKDC-211ENST00000546304 ACTA1P68133 377 aa5.46□□□□□ -1.54
PRKDC-211ENST00000546304 GALK2Q01415 458 aa5.46□□□□□ -1.54
PRKDC-211ENST00000546304 ECH1Q13011 328 aa5.46□□□□□ -1.54
PRKDC-211ENST00000546304 SNTB2Q13425 540 aaKnown RBP5.46□□□□□ -1.54
PRKDC-211ENST00000546304 EIF2B1Q14232 305 aaKnown RBP5.46□□□□□ -1.54
PRKDC-211ENST00000546304 SMN1Q16637 294 aaKnown RBP5.46□□□□□ -1.54
PRKDC-211ENST00000546304 CCDC92Q53HC0 331 aaPredicted RBP5.46□□□□□ -1.54
PRKDC-211ENST00000546304 TMEM154Q6P9G4 183 aa5.46□□□□□ -1.54
PRKDC-211ENST00000546304 RFPL4BQ6ZWI9 263 aa5.46□□□□□ -1.54
PRKDC-211ENST00000546304 SHFQ7M4L6 423 aa5.46□□□□□ -1.54
PRKDC-211ENST00000546304 CDC20BQ86Y33 519 aa5.46□□□□□ -1.54
PRKDC-211ENST00000546304 SLC35F2Q8IXU6 374 aa5.46□□□□□ -1.54
PRKDC-211ENST00000546304 PAQR4Q8N4S7 273 aaPredicted RBP5.46□□□□□ -1.54
PRKDC-211ENST00000546304 DTX3Q8N9I9 347 aa5.46□□□□□ -1.54
PRKDC-211ENST00000546304 IL17RDQ8NFM7 739 aa5.46□□□□□ -1.54
PRKDC-211ENST00000546304 OR1J2Q8NGS2 313 aa5.46□□□□□ -1.54
PRKDC-211ENST00000546304 OR1F12Q8NHA8 337 aa5.46□□□□□ -1.54
PRKDC-211ENST00000546304 SMAP2Q8WU79 429 aaPredicted RBP5.46□□□□□ -1.54
PRKDC-211ENST00000546304 RNF133Q8WVZ7 376 aa5.46□□□□□ -1.54
PRKDC-211ENST00000546304 SLC7A6Q92536 515 aa5.46□□□□□ -1.54
PRKDC-211ENST00000546304 SLAMF6Q96DU3 332 aa5.46□□□□□ -1.54
PRKDC-211ENST00000546304 RNFT2Q96EX2 444 aa5.46□□□□□ -1.54
PRKDC-211ENST00000546304 RADILQ96JH8 1075 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms