RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 IGHV3-20A0A0C4DH32 117 aa11.05□□□□□ -0.64
NPC1L1-204ENST00000546276 OR6C68A6NDL8 312 aa11.05□□□□□ -0.64
NPC1L1-204ENST00000546276 ALOX12BO75342 701 aa11.05□□□□□ -0.64
NPC1L1-204ENST00000546276 ZNF250P15622 560 aa11.05□□□□□ -0.64
NPC1L1-204ENST00000546276 SSR4P51571 173 aa11.05□□□□□ -0.64
NPC1L1-204ENST00000546276 DHRS2Q13268 280 aa11.05□□□□□ -0.64
NPC1L1-204ENST00000546276 ZNF239Q16600 458 aaKnown RBP11.05□□□□□ -0.64
NPC1L1-204ENST00000546276 WDR38Q5JTN6 314 aa11.05□□□□□ -0.64
NPC1L1-204ENST00000546276 BPHLQ86WA6 291 aaPredicted RBP11.05□□□□□ -0.64
NPC1L1-204ENST00000546276 CTAG2O75638 210 aa11.05□□□□□ -0.64
NPC1L1-204ENST00000546276 QDPRP09417 244 aa11.05□□□□□ -0.64
NPC1L1-204ENST00000546276 GLI4P10075 376 aa11.05□□□□□ -0.64
NPC1L1-204ENST00000546276 ZNF85Q03923 595 aa11.05□□□□□ -0.64
NPC1L1-204ENST00000546276 ZNF547Q8IVP9 402 aa11.05□□□□□ -0.64
NPC1L1-204ENST00000546276 ARRDC1Q8N5I2 433 aa11.05□□□□□ -0.64
NPC1L1-204ENST00000546276 NAT6Q93015 286 aa11.05□□□□□ -0.64
NPC1L1-204ENST00000546276 TSLPQ969D9 159 aa11.05□□□□□ -0.64
NPC1L1-204ENST00000546276 FBXW5Q969U6 566 aa11.05□□□□□ -0.64
NPC1L1-204ENST00000546276 GNPNAT1Q96EK6 184 aaPredicted RBP11.05□□□□□ -0.64
NPC1L1-204ENST00000546276 C4orf45Q96LM5 186 aa11.05□□□□□ -0.64
NPC1L1-204ENST00000546276 IFT22Q9H7X7 185 aa11.05□□□□□ -0.64
NPC1L1-204ENST00000546276 MMP25Q9NPA2 562 aa11.05□□□□□ -0.64
NPC1L1-204ENST00000546276 MED29Q9NX70 200 aa11.05□□□□□ -0.64
NPC1L1-204ENST00000546276 MBD1Q9UIS9 605 aaPredicted RBP11.05□□□□□ -0.64
NPC1L1-204ENST00000546276 FKBP2P26885 142 aaKnown RBP11.05□□□□□ -0.64
NPC1L1-204ENST00000546276 PARM1Q6UWI2 310 aa11.05□□□□□ -0.64
NPC1L1-204ENST00000546276 LINC00052Q96N35 136 aa11.05□□□□□ -0.64
NPC1L1-204ENST00000546276 DNAJB12Q9NXW2 375 aaKnown RBP11.05□□□□□ -0.64
NPC1L1-204ENST00000546276 HAO2Q9NYQ3 351 aa11.05□□□□□ -0.64
NPC1L1-204ENST00000546276 GAB2Q9UQC2 676 aa11.05□□□□□ -0.64
NPC1L1-204ENST00000546276 FRG2CA6NGY1 282 aa11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 IDSB3KWA1 339 aa11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 NXPH3O95157 252 aa11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 HLA-HP01893 362 aa11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 ENPP1P22413 925 aa11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 GCH1P30793 250 aa11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 CSF2RBP32927 897 aa11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 CSNK1EP49674 416 aaKnown RBP11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 RBP2P50120 134 aa11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 TGFBR3Q03167 851 aa11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 BAXQ07812 192 aa11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 FAM53BQ14153 422 aa11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 TESK1Q15569 626 aa11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 MAML2Q8IZL2 1156 aaPredicted RBP11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 ARHGEF39Q8N4T4 335 aa11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 STT3BQ8TCJ2 826 aa11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 LURAP1Q96LR2 239 aa11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 OR6C1Q96RD1 312 aa11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 PIGQQ9BRB3 760 aa11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 TGIF2Q9GZN2 237 aa11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 KIR2DS1A0A191URI9 304 aa11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 NFYBP25208 207 aa11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 KIR2DS4P43632 304 aa11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 KIR2DS1Q14954 304 aa11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 TAF9Q16594 264 aa11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 BRICD5Q6PL45 260 aa11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 LRRTM1Q86UE6 522 aa11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 ZNF687Q8N1G0 1237 aa11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 KTI12Q96EK9 354 aaPredicted RBP11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 DNAJB11Q9UBS4 358 aa11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 LRP12Q9Y561 859 aa11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 G3V3Y1 287 aa11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 RNASEK-C17orf49H0YIS7 233 aa11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 HSD17B6O14756 317 aa11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 IRF2P14316 349 aa11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 PSMB3P49720 205 aa11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 HAGHQ16775 308 aa11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 PNLIPRP3Q17RR3 467 aa11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 ZNF813Q6ZN06 617 aa11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 PHYHIPLQ96FC7 376 aa11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 PLK3Q9H4B4 646 aa11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 MRPS18AQ9NVS2 196 aaKnown RBP11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 BOKQ9UMX3 212 aaPredicted RBP11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 TMEM272A0A1B0GTI8 110 aa11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 H7C1Q1 480 aa11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 OGG1O15527 345 aa11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 ABHD16AO95870 558 aa11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 CBX7O95931 251 aa11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 OR5H8P0DN80 308 aa11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 PLA1AQ53H76 456 aa11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 TMEM215Q68D42 235 aa11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 ZNF485Q8NCK3 441 aa11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 ELSPBP1Q96BH3 223 aa11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 C6orf106Q9H6K1 298 aaPredicted RBP11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 PPP1R3EQ9H7J1 279 aa11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 LSM2Q9Y333 95 aaKnown RBP11.04□□□□□ -0.64
NPC1L1-204ENST00000546276 LRP3O75074 770 aa11.03□□□□□ -0.64
NPC1L1-204ENST00000546276 C1QCP02747 245 aa11.03□□□□□ -0.64
NPC1L1-204ENST00000546276 CD63P08962 238 aa11.03□□□□□ -0.64
NPC1L1-204ENST00000546276 RPA2P15927 270 aa11.03□□□□□ -0.64
NPC1L1-204ENST00000546276 PNLIPRP2P54317 469 aa11.03□□□□□ -0.64
NPC1L1-204ENST00000546276 CARD18P57730 90 aa11.03□□□□□ -0.64
NPC1L1-204ENST00000546276 KCNAB1Q14722 419 aa11.03□□□□□ -0.64
NPC1L1-204ENST00000546276 LGALSLQ3ZCW2 172 aaPredicted RBP11.03□□□□□ -0.64
NPC1L1-204ENST00000546276 TMEM41BQ5BJD5 291 aa11.03□□□□□ -0.64
NPC1L1-204ENST00000546276 FAM209AQ5JX71 171 aa11.03□□□□□ -0.64
NPC1L1-204ENST00000546276 OR52W1Q6IF63 320 aa11.03□□□□□ -0.64
NPC1L1-204ENST00000546276 GPX8Q8TED1 209 aa11.03□□□□□ -0.64
NPC1L1-204ENST00000546276 SCMH1Q96GD3 660 aa11.03□□□□□ -0.64
NPC1L1-204ENST00000546276 MMP26Q9NRE1 261 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms