RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 CT45A6P0DMU7 189 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 CT45A5P0DMU8 189 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 CT45A7P0DMV0 189 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 CT45A8P0DMV1 189 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 CT45A9P0DMV2 189 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 HOXB1P14653 301 aaPredicted RBP7.78□□□□□ -1.16
CLIP1-218ENST00000545889 RPL23AP62750 156 aaKnown RBP7.78□□□□□ -1.16
CLIP1-218ENST00000545889 HYAL4Q2M3T9 481 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 FAM74A3Q4VXF1 159 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 CT45A2Q5DJT8 189 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 CT45A1Q5HYN5 189 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 FJX1Q86VR8 437 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 RBMXL3Q8N7X1 1067 aaKnown RBP7.78□□□□□ -1.16
CLIP1-218ENST00000545889 ZNF511Q8NB15 262 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 OR1L3Q8NH93 324 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 CT45A3Q8NHU0 189 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 POC1BQ8TC44 478 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 SECTM1Q8WVN6 248 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 CXorf58Q96LI9 332 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 SORCS2Q96PQ0 1159 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 CACNG6Q9BXT2 260 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 FAM60AQ9NP50 221 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 GSN-AS1Q9NRJ2 163 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 DCAF13Q9NV06 445 aaKnown RBP7.78□□□□□ -1.16
CLIP1-218ENST00000545889 TCFL5Q9UL49 500 aa7.78□□□□□ -1.16
CLIP1-218ENST00000545889 LSM5Q9Y4Y9 91 aaKnown RBP7.78□□□□□ -1.16
CLIP1-218ENST00000545889 IGHV3-15A0A0B4J1V0 119 aa7.77□□□□□ -1.16
CLIP1-218ENST00000545889 OR5H15A6NDH6 313 aa7.77□□□□□ -1.16
CLIP1-218ENST00000545889 ICOSLGO75144 302 aa7.77□□□□□ -1.16
CLIP1-218ENST00000545889 DNAJB6O75190 326 aa7.77□□□□□ -1.16
CLIP1-218ENST00000545889 HOXC4P09017 264 aaPredicted RBP7.77□□□□□ -1.16
CLIP1-218ENST00000545889 FPR3P25089 353 aa7.77□□□□□ -1.16
CLIP1-218ENST00000545889 ADH6P28332 368 aa7.77□□□□□ -1.16
CLIP1-218ENST00000545889 BLVRBP30043 206 aaPredicted RBP7.77□□□□□ -1.16
CLIP1-218ENST00000545889 SOX18P35713 384 aa7.77□□□□□ -1.16
CLIP1-218ENST00000545889 DSCR4P56555 118 aaPredicted RBP7.77□□□□□ -1.16
CLIP1-218ENST00000545889 MEP1BQ16820 701 aa7.77□□□□□ -1.16
CLIP1-218ENST00000545889 AKR1C8PQ5T2L2 129 aa7.77□□□□□ -1.16
CLIP1-218ENST00000545889 SLC36A1Q7Z2H8 476 aa7.77□□□□□ -1.16
CLIP1-218ENST00000545889 OR1J1Q8NGS3 322 aa7.77□□□□□ -1.16
CLIP1-218ENST00000545889 OR4A16Q8NH70 328 aa7.77□□□□□ -1.16
CLIP1-218ENST00000545889 NEURL3Q96EH8 262 aa7.77□□□□□ -1.16
CLIP1-218ENST00000545889 MEGF10Q96KG7 1140 aa7.77□□□□□ -1.16
CLIP1-218ENST00000545889 OR5M11Q96RB7 305 aa7.77□□□□□ -1.16
CLIP1-218ENST00000545889 HDGFL3Q9Y3E1 203 aa7.77□□□□□ -1.16
CLIP1-218ENST00000545889 MUC6Q6W4X9 2439 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 SULT1C2O00338 296 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 GPR137BO60478 399 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 IFNA10P01566 189 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 TFP02787 698 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 BDKRB2P30411 391 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 RAB4BP61018 213 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 ZNF91Q05481 1191 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 ZNF616Q08AN1 781 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 ISXQ2M1V0 245 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 PCGF3Q3KNV8 242 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 ZNF385BQ569K4 471 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 SFRP4Q6FHJ7 346 aaPredicted RBP7.77□□□□□ -1.17
CLIP1-218ENST00000545889 PWWP2BQ6NUJ5 590 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 PRSS41Q7RTY9 318 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 RDH10Q8IZV5 341 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 OR56B1Q8NGI3 324 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 OR4D6Q8NGJ1 314 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 OR2Y1Q8NGV0 311 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.77□□□□□ -1.17
CLIP1-218ENST00000545889 GNRHR2Q96P88 292 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 TCEAL7Q9BRU2 100 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 MRI1Q9BV20 369 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 DUSP21Q9H596 190 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 SPACA1Q9HBV2 294 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 NOX3Q9HBY0 568 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 STUB1Q9UNE7 303 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 COA3Q9Y2R0 106 aaPredicted RBP7.77□□□□□ -1.17
CLIP1-218ENST00000545889 V9GY05 133 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 BHLHE40O14503 412 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 TXNDC12O95881 172 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 SP9P0CG40 484 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 NID1P14543 1247 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 ANXA7P20073 488 aaKnown RBP7.77□□□□□ -1.17
CLIP1-218ENST00000545889 CPT2P23786 658 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 RPL27P61353 136 aaKnown RBP7.77□□□□□ -1.17
CLIP1-218ENST00000545889 SLC14A1Q13336 389 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 ILKQ13418 452 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 CRMP1Q14194 572 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 AGERQ15109 404 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 ZNF836Q6ZNA1 936 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 DCXRQ7Z4W1 244 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 WDR5BQ86VZ2 330 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 LSRQ86X29 649 aaPredicted RBP7.77□□□□□ -1.17
CLIP1-218ENST00000545889 KCNG3Q8TAE7 436 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 MAFIPQ8WZ33 124 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 DPF1Q92782 380 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 MARVELD3Q96A59 401 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 SLC35A4Q96G79 324 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 ALKBH3Q96Q83 286 aaPredicted RBP7.77□□□□□ -1.17
CLIP1-218ENST00000545889 S1PR3Q99500 378 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 NUDT9Q9BW91 350 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 VN1R1Q9GZP7 353 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 WDR76Q9H967 626 aa7.77□□□□□ -1.17
CLIP1-218ENST00000545889 EHFQ9NZC4 300 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms