RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 TBCCD1Q9NVR7 557 aa6.53□□□□□ -1.36
SNHG1-223ENST00000545440 PLEK2Q9NYT0 353 aa6.53□□□□□ -1.36
SNHG1-223ENST00000545440 IL20RAQ9UHF4 553 aa6.53□□□□□ -1.36
SNHG1-223ENST00000545440 TMCC3Q9ULS5 477 aa6.53□□□□□ -1.36
SNHG1-223ENST00000545440 PRPF19Q9UMS4 504 aaKnown RBP6.53□□□□□ -1.36
SNHG1-223ENST00000545440 IER3IP1Q9Y5U9 82 aa6.53□□□□□ -1.36
SNHG1-223ENST00000545440 LYVE1Q9Y5Y7 322 aa6.53□□□□□ -1.36
SNHG1-223ENST00000545440 COL6A5A8TX70 2615 aa6.52□□□□□ -1.37
SNHG1-223ENST00000545440 SVEP1Q4LDE5 3571 aa6.52□□□□□ -1.37
SNHG1-223ENST00000545440 IGLV1-36A0A0B4J1U3 117 aa6.52□□□□□ -1.37
SNHG1-223ENST00000545440 IGHV1-69-2A0A0G2JMI3 117 aa6.52□□□□□ -1.37
SNHG1-223ENST00000545440 DBX1A6NMT0 343 aa6.52□□□□□ -1.37
SNHG1-223ENST00000545440 LYNX1G3V0Z9 82 aa6.52□□□□□ -1.37
SNHG1-223ENST00000545440 IDH3BO43837 385 aa6.52□□□□□ -1.37
SNHG1-223ENST00000545440 RENP00797 406 aa6.52□□□□□ -1.37
SNHG1-223ENST00000545440 TGFAP01135 160 aa6.52□□□□□ -1.37
SNHG1-223ENST00000545440 NGFP01138 241 aa6.52□□□□□ -1.37
SNHG1-223ENST00000545440 TFP02787 698 aa6.52□□□□□ -1.37
SNHG1-223ENST00000545440 CD55P08174 381 aa6.52□□□□□ -1.37
SNHG1-223ENST00000545440 LYNX1P0DP58 116 aa6.52□□□□□ -1.37
SNHG1-223ENST00000545440 PCMT1P22061 227 aa6.52□□□□□ -1.37
SNHG1-223ENST00000545440 IL2RGP31785 369 aa6.52□□□□□ -1.37
SNHG1-223ENST00000545440 MPV17P39210 176 aa6.52□□□□□ -1.37
SNHG1-223ENST00000545440 CDKN2AP42771 156 aaKnown RBP6.52□□□□□ -1.37
SNHG1-223ENST00000545440 CRYBB2P43320 205 aa6.52□□□□□ -1.37
SNHG1-223ENST00000545440 ZNF81P51508 661 aa6.52□□□□□ -1.37
SNHG1-223ENST00000545440 MMP15P51511 669 aa6.52□□□□□ -1.37
SNHG1-223ENST00000545440 HMGA2P52926 109 aa6.52□□□□□ -1.37
SNHG1-223ENST00000545440 CCL8P80075 99 aa6.52□□□□□ -1.37
SNHG1-223ENST00000545440 COX10Q12887 443 aa6.52□□□□□ -1.37
SNHG1-223ENST00000545440 TSPAN31Q12999 210 aa6.52□□□□□ -1.37
SNHG1-223ENST00000545440 ALKBH6Q3KRA9 238 aa6.52□□□□□ -1.37
SNHG1-223ENST00000545440 TMEM255AQ5JRV8 349 aa6.52□□□□□ -1.37
SNHG1-223ENST00000545440 FAM120AOSQ5T036 256 aa6.52□□□□□ -1.37
SNHG1-223ENST00000545440 SPATA46Q5T0L3 261 aa6.52□□□□□ -1.37
SNHG1-223ENST00000545440 ZNF770Q6IQ21 691 aaPredicted RBP6.52□□□□□ -1.37
SNHG1-223ENST00000545440 PGBD2Q6P3X8 592 aa6.52□□□□□ -1.37
SNHG1-223ENST00000545440 DHFR2Q86XF0 187 aa6.52□□□□□ -1.37
SNHG1-223ENST00000545440 SLC26A10Q8NG04 563 aa6.52□□□□□ -1.37
SNHG1-223ENST00000545440 OR52L1Q8NGH7 329 aa6.52□□□□□ -1.37
SNHG1-223ENST00000545440 OR4C15Q8NGM1 316 aa6.52□□□□□ -1.37
SNHG1-223ENST00000545440 GNPDA2Q8TDQ7 276 aa6.52□□□□□ -1.37
SNHG1-223ENST00000545440 ASB9Q96DX5 294 aa6.52□□□□□ -1.37
SNHG1-223ENST00000545440 NSL1Q96IY1 281 aa6.52□□□□□ -1.37
SNHG1-223ENST00000545440 ERMAPQ96PL5 475 aaPredicted RBP6.52□□□□□ -1.37
SNHG1-223ENST00000545440 DCLRE1CQ96SD1 692 aaKnown RBP6.52□□□□□ -1.37
SNHG1-223ENST00000545440 BTBD10Q9BSF8 475 aa6.52□□□□□ -1.37
SNHG1-223ENST00000545440 IFT27Q9BW83 186 aa6.52□□□□□ -1.37
SNHG1-223ENST00000545440 BEX2Q9BXY8 128 aa6.52□□□□□ -1.37
SNHG1-223ENST00000545440 TRIM15Q9C019 465 aa6.52□□□□□ -1.37
SNHG1-223ENST00000545440 HDHD2Q9H0R4 259 aa6.52□□□□□ -1.37
SNHG1-223ENST00000545440 C1orf21Q9H246 121 aa6.52□□□□□ -1.37
SNHG1-223ENST00000545440 RERGLQ9H628 205 aa6.52□□□□□ -1.37
SNHG1-223ENST00000545440 DECR2Q9NUI1 292 aa6.52□□□□□ -1.37
SNHG1-223ENST00000545440 SCOCQ9UIL1 159 aa6.52□□□□□ -1.37
SNHG1-223ENST00000545440 ZDHHC8Q9ULC8 765 aa6.52□□□□□ -1.37
SNHG1-223ENST00000545440 POLR1DQ9Y2S0 133 aa6.52□□□□□ -1.37
SNHG1-223ENST00000545440 CDH10Q9Y6N8 788 aa6.52□□□□□ -1.37
SNHG1-223ENST00000545440 MXRA5Q9NR99 2828 aa6.52□□□□□ -1.37
SNHG1-223ENST00000545440 A0A1W2PRX2 142 aa6.51□□□□□ -1.37
SNHG1-223ENST00000545440 ZSCAN5BA6NJL1 495 aa6.51□□□□□ -1.37
SNHG1-223ENST00000545440 B4DSR2 109 aa6.51□□□□□ -1.37
SNHG1-223ENST00000545440 CLDN25C9JDP6 229 aa6.51□□□□□ -1.37
SNHG1-223ENST00000545440 TNFRSF11BO00300 401 aa6.51□□□□□ -1.37
SNHG1-223ENST00000545440 DCTN6O00399 190 aa6.51□□□□□ -1.37
SNHG1-223ENST00000545440 RER1O15258 196 aa6.51□□□□□ -1.37
SNHG1-223ENST00000545440 PPIHO43447 177 aaKnown RBP6.51□□□□□ -1.37
SNHG1-223ENST00000545440 CDC14BO60729 498 aa6.51□□□□□ -1.37
SNHG1-223ENST00000545440 IGHV1-46P01743 117 aa6.51□□□□□ -1.37
SNHG1-223ENST00000545440 HIST1H1CP16403 213 aaKnown RBP6.51□□□□□ -1.37
SNHG1-223ENST00000545440 HOXB6P17509 224 aaKnown RBP6.51□□□□□ -1.37
SNHG1-223ENST00000545440 SRD5A1P18405 259 aa6.51□□□□□ -1.37
SNHG1-223ENST00000545440 KITLGP21583 273 aa6.51□□□□□ -1.37
SNHG1-223ENST00000545440 COL8A2P25067 703 aa6.51□□□□□ -1.37
SNHG1-223ENST00000545440 RGS6P49758 472 aa6.51□□□□□ -1.37
SNHG1-223ENST00000545440 DVL1P1P54792 670 aaPredicted RBP6.51□□□□□ -1.37
SNHG1-223ENST00000545440 HIST1H3AP68431 136 aa6.51□□□□□ -1.37
SNHG1-223ENST00000545440 CCNIQ14094 377 aa6.51□□□□□ -1.37
SNHG1-223ENST00000545440 GK3PQ14409 553 aa6.51□□□□□ -1.37
SNHG1-223ENST00000545440 HFEQ30201 348 aa6.51□□□□□ -1.37
SNHG1-223ENST00000545440 FAM98BQ52LJ0 330 aaKnown RBP6.51□□□□□ -1.37
SNHG1-223ENST00000545440 CCDC92Q53HC0 331 aaPredicted RBP6.51□□□□□ -1.37
SNHG1-223ENST00000545440 HIST2H3PS2Q5TEC6 136 aa6.51□□□□□ -1.37
SNHG1-223ENST00000545440 LEG1Q6P5S2 330 aa6.51□□□□□ -1.37
SNHG1-223ENST00000545440 USP51Q70EK9 711 aa6.51□□□□□ -1.37
SNHG1-223ENST00000545440 HIST2H3AQ71DI3 136 aa6.51□□□□□ -1.37
SNHG1-223ENST00000545440 CMTM4Q8IZR5 234 aa6.51□□□□□ -1.37
SNHG1-223ENST00000545440 OR6V1Q8N148 313 aa6.51□□□□□ -1.37
SNHG1-223ENST00000545440 GJC3Q8NFK1 279 aa6.51□□□□□ -1.37
SNHG1-223ENST00000545440 OR9Q2Q8NGE9 314 aa6.51□□□□□ -1.37
SNHG1-223ENST00000545440 OR4K13Q8NH42 304 aa6.51□□□□□ -1.37
SNHG1-223ENST00000545440 OR1F12Q8NHA8 337 aa6.51□□□□□ -1.37
SNHG1-223ENST00000545440 CLDND2Q8NHS1 167 aa6.51□□□□□ -1.37
SNHG1-223ENST00000545440 GTF3AQ92664 365 aaKnown RBP6.51□□□□□ -1.37
SNHG1-223ENST00000545440 ELMOD3Q96FG2 381 aa6.51□□□□□ -1.37
SNHG1-223ENST00000545440 SAMD8Q96LT4 415 aa6.51□□□□□ -1.37
SNHG1-223ENST00000545440 TSSK2Q96PF2 358 aa6.51□□□□□ -1.37
SNHG1-223ENST00000545440 NMNAT3Q96T66 252 aa6.51□□□□□ -1.37
SNHG1-223ENST00000545440 COQ7Q99807 217 aa6.51□□□□□ -1.37
SNHG1-223ENST00000545440 EGLN1Q9GZT9 426 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms