RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, human

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-223	ENST00000545215	DENND2D	Q9H6A0	471 aa	Predicted RBP	5.71	□□□□□ -1.5
LDHA-223	ENST00000545215	REEP1	Q9H902	201 aa		5.71	□□□□□ -1.5
LDHA-223	ENST00000545215	RNF122	Q9H9V4	155 aa		5.71	□□□□□ -1.5
LDHA-223	ENST00000545215	RIMS3	Q9UJD0	308 aa		5.71	□□□□□ -1.5
LDHA-223	ENST00000545215	OSGIN1	Q9UJX0	560 aa		5.71	□□□□□ -1.5
LDHA-223	ENST00000545215	A4GNT	Q9UNA3	340 aa		5.71	□□□□□ -1.5
LDHA-223	ENST00000545215	VDAC3	Q9Y277	283 aa		5.71	□□□□□ -1.5
LDHA-223	ENST00000545215	TRAPPC4	Q9Y296	219 aa		5.71	□□□□□ -1.5
LDHA-223	ENST00000545215	TMEM5	Q9Y2B1	443 aa		5.71	□□□□□ -1.5
LDHA-223	ENST00000545215	TMED7	Q9Y3B3	224 aa		5.71	□□□□□ -1.5
LDHA-223	ENST00000545215	ZNF337	Q9Y3M9	751 aa		5.71	□□□□□ -1.5
LDHA-223	ENST00000545215	TRAV36DV7	A0A075B6V5	113 aa		5.7	□□□□□ -1.5
LDHA-223	ENST00000545215	ARRDC5	A6NEK1	342 aa		5.7	□□□□□ -1.5
LDHA-223	ENST00000545215	CPSF4L	A6NMK7	179 aa	Known RBP	5.7	□□□□□ -1.5
LDHA-223	ENST00000545215	TEX22	C9J3V5	150 aa		5.7	□□□□□ -1.5
LDHA-223	ENST00000545215	hCG_2039718	K7EN88	272 aa		5.7	□□□□□ -1.5
LDHA-223	ENST00000545215	TPST2	O60704	377 aa		5.7	□□□□□ -1.5
LDHA-223	ENST00000545215	EIF1B	O60739	113 aa	Known RBP	5.7	□□□□□ -1.5
LDHA-223	ENST00000545215	AQP8	O94778	261 aa		5.7	□□□□□ -1.5
LDHA-223	ENST00000545215	GADD45G	O95257	159 aa		5.7	□□□□□ -1.5
LDHA-223	ENST00000545215	AHSA1	O95433	338 aa		5.7	□□□□□ -1.5
LDHA-223	ENST00000545215	PLG	P00747	810 aa	Predicted RBP	5.7	□□□□□ -1.5
LDHA-223	ENST00000545215	MT-ATP6	P00846	226 aa		5.7	□□□□□ -1.5
LDHA-223	ENST00000545215	PSMB1	P20618	241 aa	Known RBP	5.7	□□□□□ -1.5
LDHA-223	ENST00000545215	HTR2A	P28223	471 aa		5.7	□□□□□ -1.5
LDHA-223	ENST00000545215	RRM2	P31350	389 aa		5.7	□□□□□ -1.5
LDHA-223	ENST00000545215	FABP6	P51161	128 aa		5.7	□□□□□ -1.5
LDHA-223	ENST00000545215	CDH12	P55289	794 aa		5.7	□□□□□ -1.5
LDHA-223	ENST00000545215	CTBP2	P56545	445 aa		5.7	□□□□□ -1.5
LDHA-223	ENST00000545215	CSNK2A1	P68400	391 aa	Predicted RBP	5.7	□□□□□ -1.5
LDHA-223	ENST00000545215	ZP4	Q12836	540 aa		5.7	□□□□□ -1.5
LDHA-223	ENST00000545215	TOMM34	Q15785	309 aa	Predicted RBP	5.7	□□□□□ -1.5
LDHA-223	ENST00000545215	ATP6AP1	Q15904	470 aa		5.7	□□□□□ -1.5
LDHA-223	ENST00000545215	SYT14P1	Q58G82	188 aa		5.7	□□□□□ -1.5
LDHA-223	ENST00000545215	ZFAND6	Q6FIF0	208 aa		5.7	□□□□□ -1.5
LDHA-223	ENST00000545215	TMEM88	Q6PEY1	159 aa		5.7	□□□□□ -1.5
LDHA-223	ENST00000545215	COMTD1	Q86VU5	262 aa		5.7	□□□□□ -1.5
LDHA-223	ENST00000545215	ADGRG3	Q86Y34	549 aa		5.7	□□□□□ -1.5
LDHA-223	ENST00000545215	OR4D11	Q8NGI4	311 aa		5.7	□□□□□ -1.5
LDHA-223	ENST00000545215	OR51F2	Q8NH61	342 aa		5.7	□□□□□ -1.5
LDHA-223	ENST00000545215	TMEM239	Q8WW34	195 aa		5.7	□□□□□ -1.5
LDHA-223	ENST00000545215	HSD17B8	Q92506	261 aa		5.7	□□□□□ -1.5
LDHA-223	ENST00000545215	S100PBP	Q96BU1	408 aa		5.7	□□□□□ -1.5
LDHA-223	ENST00000545215	ZHX1-C8orf76	Q96EF9	292 aa		5.7	□□□□□ -1.5
LDHA-223	ENST00000545215	RADIL	Q96JH8	1075 aa		5.7	□□□□□ -1.5
LDHA-223	ENST00000545215	KLHL15	Q96M94	604 aa		5.7	□□□□□ -1.5
LDHA-223	ENST00000545215	AIFM2	Q9BRQ8	373 aa		5.7	□□□□□ -1.5
LDHA-223	ENST00000545215	ZNF426	Q9BUY5	554 aa		5.7	□□□□□ -1.5
LDHA-223	ENST00000545215	TAPBPL	Q9BX59	468 aa		5.7	□□□□□ -1.5
LDHA-223	ENST00000545215	DCLRE1B	Q9H816	532 aa		5.7	□□□□□ -1.5
LDHA-223	ENST00000545215	NMNAT1	Q9HAN9	279 aa	Predicted RBP	5.7	□□□□□ -1.5
LDHA-223	ENST00000545215	LPAR2	Q9HBW0	351 aa		5.7	□□□□□ -1.5
LDHA-223	ENST00000545215	FANCF	Q9NPI8	374 aa		5.7	□□□□□ -1.5
LDHA-223	ENST00000545215	C8orf4	Q9NR00	106 aa		5.7	□□□□□ -1.5
LDHA-223	ENST00000545215	CTPS2	Q9NRF8	586 aa		5.7	□□□□□ -1.5
LDHA-223	ENST00000545215	INIP	Q9NRY2	104 aa		5.7	□□□□□ -1.5
LDHA-223	ENST00000545215	PTTG2	Q9NZH5	202 aa		5.7	□□□□□ -1.5
LDHA-223	ENST00000545215	SLC7A7	Q9UM01	511 aa		5.7	□□□□□ -1.5
LDHA-223	ENST00000545215	CLEC4A	Q9UMR7	237 aa		5.7	□□□□□ -1.5
LDHA-223	ENST00000545215	MED31	Q9Y3C7	131 aa		5.7	□□□□□ -1.5
LDHA-223	ENST00000545215		V9GYQ6	96 aa		5.7	□□□□□ -1.5
LDHA-223	ENST00000545215	PCNX3	Q9H6A9	2034 aa		5.69	□□□□□ -1.5
LDHA-223	ENST00000545215	NUP214	P35658	2090 aa	Predicted RBP	5.69	□□□□□ -1.5
LDHA-223	ENST00000545215		A0A0B4J203	849 aa		5.69	□□□□□ -1.5
LDHA-223	ENST00000545215	SMIM31	A0A1B0GVY4	71 aa		5.69	□□□□□ -1.5
LDHA-223	ENST00000545215	TNFRSF11B	O00300	401 aa		5.69	□□□□□ -1.5
LDHA-223	ENST00000545215	FFAR1	O14842	300 aa		5.69	□□□□□ -1.5
LDHA-223	ENST00000545215	FZD7	O75084	574 aa		5.69	□□□□□ -1.5
LDHA-223	ENST00000545215	NPIPB7	O75200	414 aa		5.69	□□□□□ -1.5
LDHA-223	ENST00000545215	ENTPD5	O75356	428 aa		5.69	□□□□□ -1.5
LDHA-223	ENST00000545215	TSPAN9	O75954	239 aa		5.69	□□□□□ -1.5
LDHA-223	ENST00000545215	VAMP5	O95183	116 aa		5.69	□□□□□ -1.5
LDHA-223	ENST00000545215	SYNGR4	O95473	234 aa		5.69	□□□□□ -1.5
LDHA-223	ENST00000545215	PMS2P2	O95744	297 aa		5.69	□□□□□ -1.5
LDHA-223	ENST00000545215	MT-ND1	P03886	318 aa		5.69	□□□□□ -1.5
LDHA-223	ENST00000545215	CHRM2	P08172	466 aa		5.69	□□□□□ -1.5
LDHA-223	ENST00000545215	TNFRSF1B	P20333	461 aa		5.69	□□□□□ -1.5
LDHA-223	ENST00000545215	PRKACB	P22694	351 aa		5.69	□□□□□ -1.5
LDHA-223	ENST00000545215	IL32	P24001	234 aa		5.69	□□□□□ -1.5
LDHA-223	ENST00000545215	GTF2E2	P29084	291 aa	Known RBP	5.69	□□□□□ -1.5
LDHA-223	ENST00000545215	PROK1	P58294	105 aa		5.69	□□□□□ -1.5
LDHA-223	ENST00000545215	B2M	P61769	119 aa		5.69	□□□□□ -1.5
LDHA-223	ENST00000545215	SLC35A1	P78382	337 aa		5.69	□□□□□ -1.5
LDHA-223	ENST00000545215	HOXC5	Q00444	222 aa		5.69	□□□□□ -1.5
LDHA-223	ENST00000545215	SPIB	Q01892	262 aa		5.69	□□□□□ -1.5
LDHA-223	ENST00000545215	ALKBH1	Q13686	389 aa	Known RBP	5.69	□□□□□ -1.5
LDHA-223	ENST00000545215	P2RY6	Q15077	328 aa		5.69	□□□□□ -1.5
LDHA-223	ENST00000545215	GUSBP1	Q15486	140 aa		5.69	□□□□□ -1.5
LDHA-223	ENST00000545215	TRIP10	Q15642	601 aa		5.69	□□□□□ -1.5
LDHA-223	ENST00000545215	TAB1	Q15750	504 aa		5.69	□□□□□ -1.5
LDHA-223	ENST00000545215	CTU2	Q2VPK5	515 aa	Known RBP	5.69	□□□□□ -1.5
LDHA-223	ENST00000545215	FGD3	Q5JSP0	725 aa		5.69	□□□□□ -1.5
LDHA-223	ENST00000545215	KLHL24	Q6TFL4	600 aa		5.69	□□□□□ -1.5
LDHA-223	ENST00000545215	FIP1L1	Q6UN15	594 aa	Known RBP	5.69	□□□□□ -1.5
LDHA-223	ENST00000545215	ZNF730	Q6ZMV8	503 aa		5.69	□□□□□ -1.5
LDHA-223	ENST00000545215	TMPPE	Q6ZT21	453 aa		5.69	□□□□□ -1.5
LDHA-223	ENST00000545215	USP51	Q70EK9	711 aa		5.69	□□□□□ -1.5
LDHA-223	ENST00000545215	GGN	Q86UU5	652 aa		5.69	□□□□□ -1.5
LDHA-223	ENST00000545215	RBM45	Q8IUH3	476 aa	Known RBP	5.69	□□□□□ -1.5
LDHA-223	ENST00000545215	SLC43A2	Q8N370	569 aa		5.69	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms