RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 TNFRSF14Q92956 283 aa7.67□□□□□ -1.18
CHD4-212ENST00000545083 ERGIC1Q969X5 290 aa7.67□□□□□ -1.18
CHD4-212ENST00000545083 APOBEC3DQ96AK3 386 aaPredicted RBP7.67□□□□□ -1.18
CHD4-212ENST00000545083 TAMM41Q96BW9 452 aa7.67□□□□□ -1.18
CHD4-212ENST00000545083 LYSTQ99698 3801 aa7.67□□□□□ -1.18
CHD4-212ENST00000545083 CPPED1Q9BRF8 314 aaPredicted RBP7.67□□□□□ -1.18
CHD4-212ENST00000545083 WACQ9BTA9 647 aa7.67□□□□□ -1.18
CHD4-212ENST00000545083 ONECUT1Q9UBC0 465 aa7.67□□□□□ -1.18
CHD4-212ENST00000545083 HIF3AQ9Y2N7 669 aa7.67□□□□□ -1.18
CHD4-212ENST00000545083 IGHV3OR15-7A0A075B7D8 119 aa7.66□□□□□ -1.18
CHD4-212ENST00000545083 MEIOCA2RUB1 952 aa7.66□□□□□ -1.18
CHD4-212ENST00000545083 OOEPA6NGQ2 149 aa7.66□□□□□ -1.18
CHD4-212ENST00000545083 RER1O15258 196 aa7.66□□□□□ -1.18
CHD4-212ENST00000545083 SHOX2O60902 331 aaPredicted RBP7.66□□□□□ -1.18
CHD4-212ENST00000545083 PTBP3O95758 552 aaKnown RBP7.66□□□□□ -1.18
CHD4-212ENST00000545083 ECDO95905 644 aaPredicted RBP7.66□□□□□ -1.18
CHD4-212ENST00000545083 PAHP00439 452 aa7.66□□□□□ -1.18
CHD4-212ENST00000545083 IGF2P01344 180 aa7.66□□□□□ -1.18
CHD4-212ENST00000545083 CTLA4P16410 223 aa7.66□□□□□ -1.18
CHD4-212ENST00000545083 PAX6P26367 422 aa7.66□□□□□ -1.18
CHD4-212ENST00000545083 RBM34P42696 430 aaKnown RBP7.66□□□□□ -1.18
CHD4-212ENST00000545083 RGS6P49758 472 aa7.66□□□□□ -1.18
CHD4-212ENST00000545083 EMX1Q04741 257 aaPredicted RBP7.66□□□□□ -1.18
CHD4-212ENST00000545083 CD69Q07108 199 aa7.66□□□□□ -1.18
CHD4-212ENST00000545083 AQP6Q13520 282 aa7.66□□□□□ -1.18
CHD4-212ENST00000545083 PIN1Q13526 163 aaPredicted RBP7.66□□□□□ -1.18
CHD4-212ENST00000545083 SELPLGQ14242 412 aa7.66□□□□□ -1.18
CHD4-212ENST00000545083 HABP2Q14520 560 aaPredicted RBP7.66□□□□□ -1.18
CHD4-212ENST00000545083 KCNJ8Q15842 424 aa7.66□□□□□ -1.18
CHD4-212ENST00000545083 RSPO1Q2MKA7 263 aaPredicted RBP7.66□□□□□ -1.18
CHD4-212ENST00000545083 BEND6Q5SZJ8 279 aaPredicted RBP7.66□□□□□ -1.18
CHD4-212ENST00000545083 PGBD2Q6P3X8 592 aa7.66□□□□□ -1.18
CHD4-212ENST00000545083 BLOC1S3Q6QNY0 202 aa7.66□□□□□ -1.18
CHD4-212ENST00000545083 ZNF826PQ6ZT77 177 aa7.66□□□□□ -1.18
CHD4-212ENST00000545083 NDUFA11Q86Y39 141 aa7.66□□□□□ -1.18
CHD4-212ENST00000545083 MICU2Q8IYU8 434 aa7.66□□□□□ -1.18
CHD4-212ENST00000545083 SPERTQ8NA61 448 aa7.66□□□□□ -1.18
CHD4-212ENST00000545083 C11orf65Q8NCR3 313 aa7.66□□□□□ -1.18
CHD4-212ENST00000545083 OR4F17Q8NGA8 305 aa7.66□□□□□ -1.18
CHD4-212ENST00000545083 OR5L1Q8NGL2 311 aa7.66□□□□□ -1.18
CHD4-212ENST00000545083 WIPF2Q8TF74 440 aaPredicted RBP7.66□□□□□ -1.18
CHD4-212ENST00000545083 AENQ8WTP8 325 aaKnown RBP7.66□□□□□ -1.18
CHD4-212ENST00000545083 RORBQ92753 470 aa7.66□□□□□ -1.18
CHD4-212ENST00000545083 SPDL1Q96EA4 605 aa7.66□□□□□ -1.18
CHD4-212ENST00000545083 AJUBAQ96IF1 538 aa7.66□□□□□ -1.18
CHD4-212ENST00000545083 OR4F4Q96R69 305 aa7.66□□□□□ -1.18
CHD4-212ENST00000545083 CITED2Q99967 270 aaPredicted RBP7.66□□□□□ -1.18
CHD4-212ENST00000545083 KRTAP17-1Q9BYP8 105 aa7.66□□□□□ -1.18
CHD4-212ENST00000545083 MAB21L2Q9Y586 359 aa7.66□□□□□ -1.18
CHD4-212ENST00000545083 TRAV27A0A087WT01 109 aa7.65□□□□□ -1.18
CHD4-212ENST00000545083 TRAV38-1A0A0B4J264 116 aa7.65□□□□□ -1.18
CHD4-212ENST00000545083 EVPLLA8MZ36 301 aa7.65□□□□□ -1.18
CHD4-212ENST00000545083 IMPA2O14732 288 aa7.65□□□□□ -1.18
CHD4-212ENST00000545083 NDUFA2O43678 99 aa7.65□□□□□ -1.18
CHD4-212ENST00000545083 CHST1O43916 411 aa7.65□□□□□ -1.18
CHD4-212ENST00000545083 CA6P23280 308 aa7.65□□□□□ -1.18
CHD4-212ENST00000545083 EEF1B2P24534 225 aaKnown RBP7.65□□□□□ -1.18
CHD4-212ENST00000545083 MSX2P35548 267 aaPredicted RBP7.65□□□□□ -1.18
CHD4-212ENST00000545083 WDR4P57081 412 aaKnown RBP7.65□□□□□ -1.18
CHD4-212ENST00000545083 GUCA2AQ02747 115 aa7.65□□□□□ -1.18
CHD4-212ENST00000545083 GK2Q14410 553 aaPredicted RBP7.65□□□□□ -1.18
CHD4-212ENST00000545083 MESTQ5EB52 335 aa7.65□□□□□ -1.18
CHD4-212ENST00000545083 DLEU7Q6UYE1 221 aa7.65□□□□□ -1.18
CHD4-212ENST00000545083 COLCA1Q6ZS62 124 aa7.65□□□□□ -1.18
CHD4-212ENST00000545083 GCSAMQ8N6F7 178 aa7.65□□□□□ -1.18
CHD4-212ENST00000545083 BEND2Q8NDZ0 799 aa7.65□□□□□ -1.18
CHD4-212ENST00000545083 ZBTB9Q96C00 473 aa7.65□□□□□ -1.18
CHD4-212ENST00000545083 CLPTM1LQ96KA5 538 aa7.65□□□□□ -1.18
CHD4-212ENST00000545083 SSX3Q99909 188 aa7.65□□□□□ -1.18
CHD4-212ENST00000545083 B9D2Q9BPU9 175 aa7.65□□□□□ -1.18
CHD4-212ENST00000545083 PAIP2Q9BPZ3 127 aaKnown RBP7.65□□□□□ -1.18
CHD4-212ENST00000545083 RANBP3Q9H6Z4 567 aaPredicted RBP7.65□□□□□ -1.18
CHD4-212ENST00000545083 FN3KRPQ9HA64 309 aa7.65□□□□□ -1.18
CHD4-212ENST00000545083 SSU72Q9NP77 194 aaKnown RBP7.65□□□□□ -1.18
CHD4-212ENST00000545083 SERTAD4Q9NUC0 356 aa7.65□□□□□ -1.18
CHD4-212ENST00000545083 THAP1Q9NVV9 213 aa7.65□□□□□ -1.18
CHD4-212ENST00000545083 C1orf123Q9NWV4 160 aa7.65□□□□□ -1.18
CHD4-212ENST00000545083 DNAH1Q9P2D7 4330 aa7.65□□□□□ -1.18
CHD4-212ENST00000545083 KAAG1Q9UBP8 84 aa7.65□□□□□ -1.18
CHD4-212ENST00000545083 CORO2BQ9UQ03 480 aa7.65□□□□□ -1.18
CHD4-212ENST00000545083 ADAM18Q9Y3Q7 739 aa7.65□□□□□ -1.18
CHD4-212ENST00000545083 TEX13CA0A0J9YWL9 993 aa7.64□□□□□ -1.19
CHD4-212ENST00000545083 A6NIZ1 184 aa7.64□□□□□ -1.19
CHD4-212ENST00000545083 CD33P20138 364 aa7.64□□□□□ -1.19
CHD4-212ENST00000545083 ANOS1P23352 680 aa7.64□□□□□ -1.19
CHD4-212ENST00000545083 RPL4P36578 427 aaKnown RBP7.64□□□□□ -1.19
CHD4-212ENST00000545083 MRPL19P49406 292 aaKnown RBP7.64□□□□□ -1.19
CHD4-212ENST00000545083 MTPNP58546 118 aa7.64□□□□□ -1.19
CHD4-212ENST00000545083 TAS2R41P59536 307 aa7.64□□□□□ -1.19
CHD4-212ENST00000545083 RAP1BP61224 184 aa7.64□□□□□ -1.19
CHD4-212ENST00000545083 RAP1AP62834 184 aa7.64□□□□□ -1.19
CHD4-212ENST00000545083 HIST1H3AP68431 136 aa7.64□□□□□ -1.19
CHD4-212ENST00000545083 OR8G1Q15617 311 aa7.64□□□□□ -1.19
CHD4-212ENST00000545083 CYP51A1Q16850 503 aa7.64□□□□□ -1.19
CHD4-212ENST00000545083 C11orf91Q3C1V1 193 aa7.64□□□□□ -1.19
CHD4-212ENST00000545083 HIST2H3PS2Q5TEC6 136 aa7.64□□□□□ -1.19
CHD4-212ENST00000545083 HIST2H3AQ71DI3 136 aa7.64□□□□□ -1.19
CHD4-212ENST00000545083 PATL1Q86TB9 770 aaKnown RBP7.64□□□□□ -1.19
CHD4-212ENST00000545083 OR51A7Q8NH64 312 aa7.64□□□□□ -1.19
CHD4-212ENST00000545083 SLCO4A1Q96BD0 722 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms