RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 CDC42EP2O14613 210 aa10.63□□□□□ -0.71
USP28-212ENST00000544750 ENSAO43768 121 aaKnown RBP10.63□□□□□ -0.71
USP28-212ENST00000544750 IGHV4-59P01825 116 aa10.63□□□□□ -0.71
USP28-212ENST00000544750 ZNF26P17031 533 aaPredicted RBP10.63□□□□□ -0.71
USP28-212ENST00000544750 RHCEP18577 417 aa10.63□□□□□ -0.71
USP28-212ENST00000544750 GATA4P43694 442 aa10.63□□□□□ -0.71
USP28-212ENST00000544750 IER3P46695 156 aa10.63□□□□□ -0.71
USP28-212ENST00000544750 RPL27P61353 136 aaKnown RBP10.63□□□□□ -0.71
USP28-212ENST00000544750 DGCR6Q14129 220 aa10.63□□□□□ -0.71
USP28-212ENST00000544750 ALG10Q5BKT4 473 aa10.63□□□□□ -0.71
USP28-212ENST00000544750 SAMD5Q5TGI4 173 aa10.63□□□□□ -0.71
USP28-212ENST00000544750 FBXW12Q6X9E4 464 aa10.63□□□□□ -0.71
USP28-212ENST00000544750 DCDC5Q6ZRR9 648 aa10.63□□□□□ -0.71
USP28-212ENST00000544750 MBOAT2Q6ZWT7 520 aa10.63□□□□□ -0.71
USP28-212ENST00000544750 VASH1Q7L8A9 365 aaPredicted RBP10.63□□□□□ -0.71
USP28-212ENST00000544750 NLRC3Q7RTR2 1065 aa10.63□□□□□ -0.71
USP28-212ENST00000544750 TRPM8Q7Z2W7 1104 aa10.63□□□□□ -0.71
USP28-212ENST00000544750 LDLRAD3Q86YD5 345 aa10.63□□□□□ -0.71
USP28-212ENST00000544750 OR5AS1Q8N127 324 aa10.63□□□□□ -0.71
USP28-212ENST00000544750 ATG16L2Q8NAA4 619 aa10.63□□□□□ -0.71
USP28-212ENST00000544750 OR8G5Q8NG78 346 aa10.63□□□□□ -0.71
USP28-212ENST00000544750 TBC1D15Q8TC07 691 aa10.63□□□□□ -0.71
USP28-212ENST00000544750 SLC7A6Q92536 515 aa10.63□□□□□ -0.71
USP28-212ENST00000544750 PYURFQ96I23 114 aa10.63□□□□□ -0.71
USP28-212ENST00000544750 NSMCE2Q96MF7 247 aa10.63□□□□□ -0.71
USP28-212ENST00000544750 COG8Q96MW5 612 aa10.63□□□□□ -0.71
USP28-212ENST00000544750 EMC7Q9NPA0 242 aa10.63□□□□□ -0.71
USP28-212ENST00000544750 ACOXLQ9NUZ1 547 aa10.63□□□□□ -0.71
USP28-212ENST00000544750 ACTR3BQ9P1U1 418 aa10.63□□□□□ -0.71
USP28-212ENST00000544750 TRAV27A0A087WT01 109 aa10.62□□□□□ -0.71
USP28-212ENST00000544750 TRBV4-1A0A0J9YWV2 114 aa10.62□□□□□ -0.71
USP28-212ENST00000544750 A0A1W2PPL8 197 aa10.62□□□□□ -0.71
USP28-212ENST00000544750 TCRBV5S2A0A599 114 aa10.62□□□□□ -0.71
USP28-212ENST00000544750 HTR3EA5X5Y0 456 aa10.62□□□□□ -0.71
USP28-212ENST00000544750 ZNF879B4DU55 563 aa10.62□□□□□ -0.71
USP28-212ENST00000544750 J3QW42 95 aa10.62□□□□□ -0.71
USP28-212ENST00000544750 DOK2O60496 412 aa10.62□□□□□ -0.71
USP28-212ENST00000544750 GMNNO75496 209 aa10.62□□□□□ -0.71
USP28-212ENST00000544750 H1F0P07305 194 aaKnown RBP10.62□□□□□ -0.71
USP28-212ENST00000544750 IFNA8P32881 189 aa10.62□□□□□ -0.71
USP28-212ENST00000544750 GPR4P46093 362 aa10.62□□□□□ -0.71
USP28-212ENST00000544750 HTR5AP47898 357 aa10.62□□□□□ -0.71
USP28-212ENST00000544750 SRP9P49458 86 aaKnown RBP10.62□□□□□ -0.71
USP28-212ENST00000544750 MS4A2Q01362 244 aa10.62□□□□□ -0.71
USP28-212ENST00000544750 TOP3AQ13472 1001 aaPredicted RBP10.62□□□□□ -0.71
USP28-212ENST00000544750 SEC23BQ15437 767 aa10.62□□□□□ -0.71
USP28-212ENST00000544750 C2orf68Q2NKX9 166 aa10.62□□□□□ -0.71
USP28-212ENST00000544750 OR2T2Q6IF00 324 aa10.62□□□□□ -0.71
USP28-212ENST00000544750 CYP2R1Q6VVX0 501 aa10.62□□□□□ -0.71
USP28-212ENST00000544750 ZNF730Q6ZMV8 503 aa10.62□□□□□ -0.71
USP28-212ENST00000544750 MOGAT3Q86VF5 341 aa10.62□□□□□ -0.71
USP28-212ENST00000544750 CYP4Z1Q86W10 505 aa10.62□□□□□ -0.71
USP28-212ENST00000544750 RNF113BQ8IZP6 322 aaKnown RBP10.62□□□□□ -0.71
USP28-212ENST00000544750 ARHGAP24Q8N264 748 aa10.62□□□□□ -0.71
USP28-212ENST00000544750 OR13C2Q8NGS9 318 aa10.62□□□□□ -0.71
USP28-212ENST00000544750 OR13G1Q8NGZ3 307 aa10.62□□□□□ -0.71
USP28-212ENST00000544750 PCGF1Q9BSM1 259 aa10.62□□□□□ -0.71
USP28-212ENST00000544750 SIRPDQ9H106 197 aa10.62□□□□□ -0.71
USP28-212ENST00000544750 C1orf21Q9H246 121 aa10.62□□□□□ -0.71
USP28-212ENST00000544750 CTSZQ9UBR2 303 aa10.62□□□□□ -0.71
USP28-212ENST00000544750 OR6C6A6NF89 314 aa10.61□□□□□ -0.71
USP28-212ENST00000544750 C3orf80F5H4A9 247 aa10.61□□□□□ -0.71
USP28-212ENST00000544750 F5H5P2 479 aa10.61□□□□□ -0.71
USP28-212ENST00000544750 SGCEO43556 437 aa10.61□□□□□ -0.71
USP28-212ENST00000544750 TSPAN9O75954 239 aa10.61□□□□□ -0.71
USP28-212ENST00000544750 GUCA1AP43080 201 aaPredicted RBP10.61□□□□□ -0.71
USP28-212ENST00000544750 OMPP47874 163 aa10.61□□□□□ -0.71
USP28-212ENST00000544750 NPY4RP50391 375 aa10.61□□□□□ -0.71
USP28-212ENST00000544750 SCRN3Q0VDG4 424 aa10.61□□□□□ -0.71
USP28-212ENST00000544750 LCN8Q6JVE9 175 aa10.61□□□□□ -0.71
USP28-212ENST00000544750 TMPRSS11FQ6ZWK6 438 aa10.61□□□□□ -0.71
USP28-212ENST00000544750 C1orf87Q8N0U7 546 aa10.61□□□□□ -0.71
USP28-212ENST00000544750 Q8TCH9 128 aa10.61□□□□□ -0.71
USP28-212ENST00000544750 GATAD2BQ8WXI9 593 aa10.61□□□□□ -0.71
USP28-212ENST00000544750 SLC7A6OSQ96CW6 309 aaPredicted RBP10.61□□□□□ -0.71
USP28-212ENST00000544750 CLPTM1LQ96KA5 538 aa10.61□□□□□ -0.71
USP28-212ENST00000544750 IL1RAPQ9NPH3 570 aa10.61□□□□□ -0.71
USP28-212ENST00000544750 PRPF19Q9UMS4 504 aaKnown RBP10.61□□□□□ -0.71
USP28-212ENST00000544750 COL7A1Q02388 2944 aa10.61□□□□□ -0.71
USP28-212ENST00000544750 IGHV1-69DA0A0B4J2H0 117 aa10.6□□□□□ -0.71
USP28-212ENST00000544750 IGHV3-64DA0A0J9YX35 117 aa10.6□□□□□ -0.71
USP28-212ENST00000544750 A0A0U1RQK1 487 aa10.6□□□□□ -0.71
USP28-212ENST00000544750 IQCF6A8MYZ5 107 aa10.6□□□□□ -0.71
USP28-212ENST00000544750 EFCAB9A8MZ26 197 aa10.6□□□□□ -0.71
USP28-212ENST00000544750 FCN3O75636 299 aa10.6□□□□□ -0.71
USP28-212ENST00000544750 TOX4O94842 621 aa10.6□□□□□ -0.71
USP28-212ENST00000544750 IGHV1-69P01742 117 aa10.6□□□□□ -0.71
USP28-212ENST00000544750 PRB2P02812 416 aaPredicted RBP10.6□□□□□ -0.71
USP28-212ENST00000544750 LIPFP07098 398 aa10.6□□□□□ -0.71
USP28-212ENST00000544750 MAGEA2P43356 314 aa10.6□□□□□ -0.71
USP28-212ENST00000544750 SLC9A3P48764 834 aa10.6□□□□□ -0.71
USP28-212ENST00000544750 RAD23AP54725 363 aa10.6□□□□□ -0.71
USP28-212ENST00000544750 FXYD6P3P58550 94 aa10.6□□□□□ -0.71
USP28-212ENST00000544750 CTXN1P60606 82 aa10.6□□□□□ -0.71
USP28-212ENST00000544750 MAB21L1Q13394 359 aa10.6□□□□□ -0.71
USP28-212ENST00000544750 TRIM25Q14258 630 aaKnown RBP10.6□□□□□ -0.71
USP28-212ENST00000544750 CCDC92Q53HC0 331 aaPredicted RBP10.6□□□□□ -0.71
USP28-212ENST00000544750 FGD3Q5JSP0 725 aa10.6□□□□□ -0.71
USP28-212ENST00000544750 CLEC12AQ5QGZ9 265 aa10.6□□□□□ -0.71
USP28-212ENST00000544750 GDPGP1Q6ZNW5 385 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms