RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 OR9Q1Q8NGQ5 310 aa5.73□□□□□ -1.49
CDCA3-209ENST00000544610 OR6K6Q8NGW6 343 aa5.73□□□□□ -1.49
CDCA3-209ENST00000544610 RAB2BQ8WUD1 216 aa5.73□□□□□ -1.49
CDCA3-209ENST00000544610 NANOS1Q8WY41 292 aaKnown RBP5.73□□□□□ -1.49
CDCA3-209ENST00000544610 ROBO4Q8WZ75 1007 aa5.73□□□□□ -1.49
CDCA3-209ENST00000544610 DGCR14Q96DF8 476 aaKnown RBP5.73□□□□□ -1.49
CDCA3-209ENST00000544610 MGLLQ99685 303 aa5.73□□□□□ -1.49
CDCA3-209ENST00000544610 EMC6Q9BV81 110 aa5.73□□□□□ -1.49
CDCA3-209ENST00000544610 HDHD5Q9BXW7 423 aa5.73□□□□□ -1.49
CDCA3-209ENST00000544610 ACTR6Q9GZN1 396 aa5.73□□□□□ -1.49
CDCA3-209ENST00000544610 C1orf198Q9H425 327 aa5.73□□□□□ -1.49
CDCA3-209ENST00000544610 MOB1AQ9H8S9 216 aa5.73□□□□□ -1.49
CDCA3-209ENST00000544610 SP140LQ9H930 580 aa5.73□□□□□ -1.49
CDCA3-209ENST00000544610 AMBNQ9NP70 447 aa5.73□□□□□ -1.49
CDCA3-209ENST00000544610 POLE4Q9NR33 117 aa5.73□□□□□ -1.49
CDCA3-209ENST00000544610 DDX28Q9NUL7 540 aaKnown RBP5.73□□□□□ -1.49
CDCA3-209ENST00000544610 MRPL22Q9NWU5 206 aaKnown RBP5.73□□□□□ -1.49
CDCA3-209ENST00000544610 TAS2R16Q9NYV7 291 aa5.73□□□□□ -1.49
CDCA3-209ENST00000544610 ERVK-18Q9QC07 812 aa5.73□□□□□ -1.49
CDCA3-209ENST00000544610 ZNF391Q9UJN7 358 aa5.73□□□□□ -1.49
CDCA3-209ENST00000544610 LAMP5Q9UJQ1 280 aa5.73□□□□□ -1.49
CDCA3-209ENST00000544610 UGT2A1Q9Y4X1 527 aa5.73□□□□□ -1.49
CDCA3-209ENST00000544610 FREM1Q5H8C1 2179 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 IGHV3-15A0A0B4J1V0 119 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 LOC100289279A0A1B0GTE1 492 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 METTL15A6NJ78 407 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 CCRL2O00421 344 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 ZNF593O00488 134 aaPredicted RBP5.72□□□□□ -1.49
CDCA3-209ENST00000544610 OGG1O15527 345 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 TBX1O43435 398 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 SERPINI2O75830 405 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 PTHP01270 115 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 TFP02787 698 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 KRT8P05787 483 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 CLUP10909 449 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 ATP6V1B1P15313 513 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 PSMB1P20618 241 aaKnown RBP5.72□□□□□ -1.49
CDCA3-209ENST00000544610 COX5AP20674 150 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 TUBG1P23258 451 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 GABRA5P31644 462 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 OTX1P32242 354 aaPredicted RBP5.72□□□□□ -1.49
CDCA3-209ENST00000544610 RANBP1P43487 201 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 RGS6P49758 472 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 SELENOPP49908 381 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 GBX2P52951 348 aaPredicted RBP5.72□□□□□ -1.49
CDCA3-209ENST00000544610 CDH15P55291 814 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 GRB2P62993 217 aaKnown RBP5.72□□□□□ -1.49
CDCA3-209ENST00000544610 SCRN3Q0VDG4 424 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 TIGD6Q17RP2 521 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 CLEC12BQ2HXU8 276 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 RPL22L1Q6P5R6 122 aaKnown RBP5.72□□□□□ -1.49
CDCA3-209ENST00000544610 ANKRD16Q6P6B7 361 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 CD200R1LQ6Q8B3 271 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 TFAP2EQ6VUC0 442 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 BEND4Q6ZU67 534 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 FAM220AQ7Z4H9 259 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 BCDIN3DQ7Z5W3 292 aaKnown RBP5.72□□□□□ -1.49
CDCA3-209ENST00000544610 GPR141Q7Z602 305 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 ANKRD13BQ86YJ7 626 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 ERI1Q8IV48 349 aaKnown RBP5.72□□□□□ -1.49
CDCA3-209ENST00000544610 TUSC5Q8IXB3 177 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 C1orf174Q8IYL3 243 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 ZNF100Q8IYN0 542 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 SYT14Q8NB59 555 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 MAPK1IP1LQ8NDC0 245 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 OR10H4Q8NGA5 316 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 OR4F15Q8NGB8 312 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 OR52N5Q8NH56 324 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 LILRB1Q8NHL6 650 aaPredicted RBP5.72□□□□□ -1.49
CDCA3-209ENST00000544610 ST7LQ8TDW4 575 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 SNX33Q8WV41 574 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 RNF133Q8WVZ7 376 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 AKAP1Q92667 903 aaKnown RBP eCLIP5.72□□□□□ -1.49
CDCA3-209ENST00000544610 NABP1Q96AH0 204 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 OTULINQ96BN8 352 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 ZMYND19Q96E35 227 aaPredicted RBP5.72□□□□□ -1.49
CDCA3-209ENST00000544610 TSSK2Q96PF2 358 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 OR8B4Q96RC9 309 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 FOXB1Q99853 325 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 ALG8Q9BVK2 526 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 CDADC1Q9BWV3 514 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 MROQ9BYG7 248 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 CCDC90BQ9GZT6 254 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 HDHD2Q9H0R4 259 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 KCNN2Q9H2S1 579 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 MED20Q9H944 212 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 CRLF2Q9HC73 371 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 GPR35Q9HC97 309 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 TUBG2Q9NRH3 451 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 TMEM38BQ9NVV0 291 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 NDUFB11Q9NX14 153 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 UPB1Q9UBR1 384 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 AASSQ9UDR5 926 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 GDF2Q9UK05 429 aaPredicted RBP5.72□□□□□ -1.49
CDCA3-209ENST00000544610 CLEC4AQ9UMR7 237 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 LAMP3Q9UQV4 416 aa5.72□□□□□ -1.49
CDCA3-209ENST00000544610 COA3Q9Y2R0 106 aaPredicted RBP5.72□□□□□ -1.49
CDCA3-209ENST00000544610 MXRA5Q9NR99 2828 aa5.71□□□□□ -1.49
CDCA3-209ENST00000544610 TMEM212A6NML5 194 aa5.71□□□□□ -1.5
CDCA3-209ENST00000544610 DHRS7CA6NNS2 312 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms