RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 RAB3IPQ96QF0 476 aaPredicted RBP4.78□□□□□ -1.64
CLSTN3-215ENST00000544584 HIST1H2AAQ96QV6 131 aa4.78□□□□□ -1.64
CLSTN3-215ENST00000544584 INTS14Q96SY0 518 aa4.78□□□□□ -1.64
CLSTN3-215ENST00000544584 MNTQ99583 582 aa4.78□□□□□ -1.64
CLSTN3-215ENST00000544584 C1QTNF5Q9BXJ0 243 aa4.78□□□□□ -1.64
CLSTN3-215ENST00000544584 MROQ9BYG7 248 aa4.78□□□□□ -1.64
CLSTN3-215ENST00000544584 FN3KQ9H479 309 aa4.78□□□□□ -1.64
CLSTN3-215ENST00000544584 EGLN3Q9H6Z9 239 aa4.78□□□□□ -1.64
CLSTN3-215ENST00000544584 ZNF665Q9H7R5 613 aa4.78□□□□□ -1.64
CLSTN3-215ENST00000544584 PAPOLBQ9NRJ5 636 aaKnown RBP4.78□□□□□ -1.64
CLSTN3-215ENST00000544584 KRT84Q9NSB2 600 aa4.78□□□□□ -1.64
CLSTN3-215ENST00000544584 CENPMQ9NSP4 180 aa4.78□□□□□ -1.64
CLSTN3-215ENST00000544584 POMPQ9Y244 141 aa4.78□□□□□ -1.64
CLSTN3-215ENST00000544584 STARD10Q9Y365 291 aa4.78□□□□□ -1.64
CLSTN3-215ENST00000544584 AP4S1Q9Y587 144 aa4.78□□□□□ -1.64
CLSTN3-215ENST00000544584 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 A0A0A6YYJ9 748 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 IGHV4-61A0A0C4DH41 118 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 TCRBV3S1A0A5B6 114 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 ACOD1A6NK06 481 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 SLC22A31A6NKX4 558 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 ANXA2P2A6NMY6 339 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 IQCF6A8MYZ5 107 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 G3V2T6 193 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 GSC2O15499 205 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 NDUFA2O43678 99 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 CDC14BO60729 498 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 LILRA1O75019 489 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 TIPRLO75663 272 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 LY6HO94772 140 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 GLCEO94923 617 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 FSTL3O95633 263 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 NGFP01138 241 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 ANXA2P07355 339 aaKnown RBP4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 LYNP07948 512 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 IGFBP1P08833 259 aaPredicted RBP4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 SPARCP09486 303 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 H2BFMP0C1H6 154 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 GAAP10253 952 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 ZNF16P17020 682 aaPredicted RBP4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 ZNF26P17031 533 aaPredicted RBP4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 SPI1P17947 270 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 COL8A2P25067 703 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 FPR2P25090 351 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 ATP6V1E1P36543 226 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 MPV17P39210 176 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 MDH2P40926 338 aaKnown RBP4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 WNT5AP41221 380 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 MAGEB1P43366 347 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 FXYD6P3P58550 94 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 CDC42P60953 191 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 ERVS71-1P61550 626 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 BTG1P62324 171 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 HIST1H3AP68431 136 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 POU4F2Q12837 409 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 CDK5R2Q13319 367 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 CCNIQ14094 377 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 EIF2B1Q14232 305 aaKnown RBP4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 GINS1Q14691 196 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 OR8G1Q15617 311 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 TIGD6Q17RP2 521 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 ZNF181Q2M3W8 571 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 C11orf91Q3C1V1 193 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 TMEM155Q4W5P6 130 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 KLHL12Q53G59 568 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 CCDC92Q53HC0 331 aaPredicted RBP4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 ESCO2Q56NI9 601 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 FAM120AOSQ5T036 256 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 HIST2H3PS2Q5TEC6 136 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 ZNF770Q6IQ21 691 aaPredicted RBP4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 FAHD2BQ6P2I3 314 aaPredicted RBP4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 DEGS2Q6QHC5 323 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 BTNL3Q6UXE8 466 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 RBMS3Q6XE24 437 aaKnown RBP4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 RFPL4BQ6ZWI9 263 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 HIST2H3AQ71DI3 136 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 ERI1Q8IV48 349 aaKnown RBP4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 GID4Q8IVV7 300 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 WDFY1Q8IWB7 410 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 ADGRG5Q8IZF4 528 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 PARP8Q8N3A8 854 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 RFLNBQ8N5W9 214 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 CYB561A3Q8NBI2 242 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 SLC37A3Q8NCC5 494 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 PAPD5Q8NDF8 572 aaKnown RBP4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 OR8S1Q8NH09 359 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 FAM81AQ8TBF8 368 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 ZNF418Q8TF45 676 aaPredicted RBP4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 TMEM186Q96B77 213 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 MSI2Q96DH6 328 aaKnown RBP4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 FAHD2AQ96GK7 314 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 TSSK2Q96PF2 358 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 KCNJ15Q99712 375 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 GPA33Q99795 319 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 RBM4Q9BWF3 364 aaKnown RBP4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 OR51V1Q9H2C8 321 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 FN3KRPQ9HA64 309 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 MSL2Q9HCI7 577 aa4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 DDX28Q9NUL7 540 aaKnown RBP4.77□□□□□ -1.65
CLSTN3-215ENST00000544584 TMEM106BQ9NUM4 274 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms