RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 CPEB3Q8NE35 698 aaKnown RBP26.54■■□□□ 1.84
CCM2-219ENST00000544363 ASB5Q8WWX0 329 aa26.54■■□□□ 1.84
CCM2-219ENST00000544363 ORAI1Q96D31 301 aa26.54■■□□□ 1.84
CCM2-219ENST00000544363 PGAM5Q96HS1 289 aa26.54■■□□□ 1.84
CCM2-219ENST00000544363 ZNF319Q9P2F9 582 aa26.54■■□□□ 1.84
CCM2-219ENST00000544363 CIB4A0PJX0 185 aa26.54■■□□□ 1.84
CCM2-219ENST00000544363 CAV3P56539 151 aa26.54■■□□□ 1.84
CCM2-219ENST00000544363 GABRA6Q16445 453 aa26.54■■□□□ 1.84
CCM2-219ENST00000544363 SFRP5Q5T4F7 317 aa26.54■■□□□ 1.84
CCM2-219ENST00000544363 LUZP2Q86TE4 346 aa26.54■■□□□ 1.84
CCM2-219ENST00000544363 CXorf56Q9H5V9 222 aa26.54■■□□□ 1.84
CCM2-219ENST00000544363 NOX3Q9HBY0 568 aa26.54■■□□□ 1.84
CCM2-219ENST00000544363 B3GNT2Q9NY97 397 aa26.54■■□□□ 1.84
CCM2-219ENST00000544363 RAD51DO75771 328 aa26.53■■□□□ 1.84
CCM2-219ENST00000544363 COX5BP10606 129 aa26.53■■□□□ 1.84
CCM2-219ENST00000544363 ANOS1P23352 680 aa26.53■■□□□ 1.84
CCM2-219ENST00000544363 PMPCAQ10713 525 aa26.53■■□□□ 1.84
CCM2-219ENST00000544363 BEND4Q6ZU67 534 aa26.53■■□□□ 1.84
CCM2-219ENST00000544363 CCDC36Q8IYA8 594 aa26.53■■□□□ 1.84
CCM2-219ENST00000544363 BOD1Q96IK1 185 aa26.53■■□□□ 1.84
CCM2-219ENST00000544363 NCR1O76036 304 aa26.52■■□□□ 1.84
CCM2-219ENST00000544363 PCSK4Q6UW60 755 aa26.52■■□□□ 1.84
CCM2-219ENST00000544363 C1orf162Q8NEQ5 155 aaPredicted RBP26.52■■□□□ 1.84
CCM2-219ENST00000544363 OR51E1Q8TCB6 317 aa26.52■■□□□ 1.84
CCM2-219ENST00000544363 KCNS3Q9BQ31 491 aa26.52■■□□□ 1.84
CCM2-219ENST00000544363 PLEKHB1Q9UF11 243 aaPredicted RBP26.52■■□□□ 1.84
CCM2-219ENST00000544363 A0A075B6Q4 140 aa26.51■■□□□ 1.83
CCM2-219ENST00000544363 A0A1B0GTI1 187 aa26.51■■□□□ 1.83
CCM2-219ENST00000544363 SYT7O43581 403 aa26.51■■□□□ 1.83
CCM2-219ENST00000544363 HOXB1P14653 301 aaPredicted RBP26.51■■□□□ 1.83
CCM2-219ENST00000544363 GSG1Q2KHT4 349 aa26.51■■□□□ 1.83
CCM2-219ENST00000544363 LINC00299Q6ZSB3 139 aa26.51■■□□□ 1.83
CCM2-219ENST00000544363 NR2C2APQ86WQ0 139 aa26.51■■□□□ 1.83
CCM2-219ENST00000544363 OR13C3Q8NGS6 347 aa26.51■■□□□ 1.83
CCM2-219ENST00000544363 A0A1B0GVI7 797 aa26.5■■□□□ 1.83
CCM2-219ENST00000544363 E9PLN8 166 aa26.5■■□□□ 1.83
CCM2-219ENST00000544363 CD2P06729 351 aa26.5■■□□□ 1.83
CCM2-219ENST00000544363 RAB3BP20337 219 aa26.5■■□□□ 1.83
CCM2-219ENST00000544363 HGFACQ04756 655 aa26.5■■□□□ 1.83
CCM2-219ENST00000544363 P2RY6Q15077 328 aa26.5■■□□□ 1.83
CCM2-219ENST00000544363 OR6Q1Q8NGQ2 317 aa26.5■■□□□ 1.83
CCM2-219ENST00000544363 C6orf62Q9GZU0 229 aaPredicted RBP26.5■■□□□ 1.83
CCM2-219ENST00000544363 TCF7L1Q9HCS4 588 aa26.5■■□□□ 1.83
CCM2-219ENST00000544363 SH3BGRL2Q9UJC5 107 aa26.5■■□□□ 1.83
CCM2-219ENST00000544363 A0A0U1RQV5 110 aa26.5■■□□□ 1.83
CCM2-219ENST00000544363 APEX1P27695 318 aaKnown RBP26.5■■□□□ 1.83
CCM2-219ENST00000544363 PLP2Q04941 152 aa26.5■■□□□ 1.83
CCM2-219ENST00000544363 ST6GALNAC3Q8NDV1 305 aa26.5■■□□□ 1.83
CCM2-219ENST00000544363 OR52H1Q8NGJ2 320 aa26.5■■□□□ 1.83
CCM2-219ENST00000544363 SLITRK2Q9H156 845 aa26.5■■□□□ 1.83
CCM2-219ENST00000544363 SP140LQ9H930 580 aa26.5■■□□□ 1.83
CCM2-219ENST00000544363 GPR84Q9NQS5 396 aa26.5■■□□□ 1.83
CCM2-219ENST00000544363 IQCMA0A1B0GVH7 501 aa26.49■■□□□ 1.83
CCM2-219ENST00000544363 C5orf63A6NC05 138 aa26.49■■□□□ 1.83
CCM2-219ENST00000544363 CCL1P22362 96 aa26.49■■□□□ 1.83
CCM2-219ENST00000544363 OPRM1P35372 400 aa26.49■■□□□ 1.83
CCM2-219ENST00000544363 UBE2NP61088 152 aaKnown RBP26.49■■□□□ 1.83
CCM2-219ENST00000544363 CXorf67Q86X51 503 aaPredicted RBP26.49■■□□□ 1.83
CCM2-219ENST00000544363 OR10A2Q9H208 303 aa26.49■■□□□ 1.83
CCM2-219ENST00000544363 RTTNQ86VV8 2226 aa26.48■■□□□ 1.83
CCM2-219ENST00000544363 A0A0G2JNJ9 132 aa26.48■■□□□ 1.83
CCM2-219ENST00000544363 TBX1O43435 398 aa26.48■■□□□ 1.83
CCM2-219ENST00000544363 IGLV3-1P01715 115 aa26.48■■□□□ 1.83
CCM2-219ENST00000544363 BMXP51813 675 aa26.48■■□□□ 1.83
CCM2-219ENST00000544363 OR10A3P58181 314 aa26.48■■□□□ 1.83
CCM2-219ENST00000544363 TSC22D1Q15714 1073 aa26.48■■□□□ 1.83
CCM2-219ENST00000544363 CEP78Q5JTW2 689 aa26.48■■□□□ 1.83
CCM2-219ENST00000544363 STAC2Q6ZMT1 411 aa26.48■■□□□ 1.83
CCM2-219ENST00000544363 MDP1Q86V88 176 aa26.48■■□□□ 1.83
CCM2-219ENST00000544363 COMMD2Q86X83 199 aa26.48■■□□□ 1.83
CCM2-219ENST00000544363 AP3S1Q92572 193 aa26.48■■□□□ 1.83
CCM2-219ENST00000544363 ZNF275Q9NSD4 429 aaPredicted RBP26.48■■□□□ 1.83
CCM2-219ENST00000544363 CRNNQ9UBG3 495 aaPredicted RBP26.48■■□□□ 1.83
CCM2-219ENST00000544363 Q9UFV3 132 aa26.48■■□□□ 1.83
CCM2-219ENST00000544363 LOC100509620A0A075B734 347 aa26.47■■□□□ 1.83
CCM2-219ENST00000544363 A0A0G2JK05 382 aa26.47■■□□□ 1.83
CCM2-219ENST00000544363 ANKRD61A6NGH8 418 aa26.47■■□□□ 1.83
CCM2-219ENST00000544363 PDCD5O14737 125 aa26.47■■□□□ 1.83
CCM2-219ENST00000544363 PAX7P23759 505 aa26.47■■□□□ 1.83
CCM2-219ENST00000544363 STOMP27105 288 aa26.47■■□□□ 1.83
CCM2-219ENST00000544363 MOGQ16653 247 aa26.47■■□□□ 1.83
CCM2-219ENST00000544363 SNAI3Q3KNW1 292 aa26.47■■□□□ 1.83
CCM2-219ENST00000544363 CROCCP3Q8IVE0 287 aa26.47■■□□□ 1.83
CCM2-219ENST00000544363 AK6Q9Y3D8 172 aaKnown RBP26.47■■□□□ 1.83
CCM2-219ENST00000544363 TRAV8-7A0A075B6U6 113 aa26.47■■□□□ 1.83
CCM2-219ENST00000544363 LCATP04180 440 aa26.47■■□□□ 1.83
CCM2-219ENST00000544363 GFOD2Q3B7J2 385 aa26.47■■□□□ 1.83
CCM2-219ENST00000544363 ZNF474Q6S9Z5 364 aaPredicted RBP26.47■■□□□ 1.83
CCM2-219ENST00000544363 DOK3Q7L591 496 aa26.47■■□□□ 1.83
CCM2-219ENST00000544363 ZNF584Q8IVC4 421 aa26.47■■□□□ 1.83
CCM2-219ENST00000544363 WBP1Q96G27 269 aa26.47■■□□□ 1.83
CCM2-219ENST00000544363 ZNF75AQ96N20 296 aa26.47■■□□□ 1.83
CCM2-219ENST00000544363 SMURF1Q9HCE7 757 aa26.47■■□□□ 1.83
CCM2-219ENST00000544363 LMX1BO60663 402 aa26.46■■□□□ 1.83
CCM2-219ENST00000544363 CFL1P23528 166 aaKnown RBP26.46■■□□□ 1.83
CCM2-219ENST00000544363 SFXN4Q6P4A7 337 aa26.46■■□□□ 1.83
CCM2-219ENST00000544363 C17orf78Q8N4C9 275 aa26.46■■□□□ 1.83
CCM2-219ENST00000544363 LYZL4Q96KX0 146 aa26.46■■□□□ 1.83
CCM2-219ENST00000544363 PIGMQ9H3S5 423 aa26.46■■□□□ 1.83
CCM2-219ENST00000544363 ZCCHC4Q9H5U6 513 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms