RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 GRHPRQ9UBQ7 328 aa11.36□□□□□ -0.59
SMG8-202ENST00000543872 PRKNO60260 465 aaPredicted RBP11.36□□□□□ -0.59
SMG8-202ENST00000543872 CSTBP04080 98 aaKnown RBP11.36□□□□□ -0.59
SMG8-202ENST00000543872 SPARCP09486 303 aa11.36□□□□□ -0.59
SMG8-202ENST00000543872 CEBPEQ15744 281 aa11.36□□□□□ -0.59
SMG8-202ENST00000543872 ALG10Q5BKT4 473 aa11.36□□□□□ -0.59
SMG8-202ENST00000543872 ZNF343Q6P1L6 599 aa11.36□□□□□ -0.59
SMG8-202ENST00000543872 OR9K2Q8NGE7 335 aa11.36□□□□□ -0.59
SMG8-202ENST00000543872 SLC25A36Q96CQ1 311 aa11.36□□□□□ -0.59
SMG8-202ENST00000543872 SLC17A5Q9NRA2 495 aa11.36□□□□□ -0.59
SMG8-202ENST00000543872 SIRT7Q9NRC8 400 aa11.36□□□□□ -0.59
SMG8-202ENST00000543872 B9D1Q9UPM9 204 aa11.36□□□□□ -0.59
SMG8-202ENST00000543872 FABP4P15090 132 aa11.36□□□□□ -0.59
SMG8-202ENST00000543872 MFSD8Q8NHS3 518 aa11.36□□□□□ -0.59
SMG8-202ENST00000543872 LRFN5Q96NI6 719 aa11.36□□□□□ -0.59
SMG8-202ENST00000543872 TUBA4BQ9H853 241 aa11.36□□□□□ -0.59
SMG8-202ENST00000543872 PARP11Q9NR21 331 aa11.36□□□□□ -0.59
SMG8-202ENST00000543872 DUSP22Q9NRW4 184 aa11.36□□□□□ -0.59
SMG8-202ENST00000543872 METTL12A8MUP2 240 aa11.35□□□□□ -0.59
SMG8-202ENST00000543872 EREGO14944 169 aa11.35□□□□□ -0.59
SMG8-202ENST00000543872 CCL16O15467 120 aa11.35□□□□□ -0.59
SMG8-202ENST00000543872 FGF17O60258 216 aa11.35□□□□□ -0.59
SMG8-202ENST00000543872 OR6A2O95222 327 aa11.35□□□□□ -0.59
SMG8-202ENST00000543872 F10P00742 488 aa11.35□□□□□ -0.59
SMG8-202ENST00000543872 CAMLGP49069 296 aa11.35□□□□□ -0.59
SMG8-202ENST00000543872 TNFRSF9Q07011 255 aa11.35□□□□□ -0.59
SMG8-202ENST00000543872 CLEC18BQ6UXF7 455 aa11.35□□□□□ -0.59
SMG8-202ENST00000543872 OR2I1PQ8NGU4 316 aa11.35□□□□□ -0.59
SMG8-202ENST00000543872 OR4K15Q8NH41 348 aa11.35□□□□□ -0.59
SMG8-202ENST00000543872 OR5B2Q96R09 309 aa11.35□□□□□ -0.59
SMG8-202ENST00000543872 DOCK9Q9BZ29 2069 aa11.35□□□□□ -0.59
SMG8-202ENST00000543872 PHOX2AO14813 284 aa11.35□□□□□ -0.59
SMG8-202ENST00000543872 SCGB1D2O95969 90 aa11.35□□□□□ -0.59
SMG8-202ENST00000543872 SOD2P04179 222 aa11.35□□□□□ -0.59
SMG8-202ENST00000543872 ZNF25P17030 456 aaPredicted RBP11.35□□□□□ -0.59
SMG8-202ENST00000543872 GDI1P31150 447 aa11.35□□□□□ -0.59
SMG8-202ENST00000543872 FCGR2CP31995 323 aa11.35□□□□□ -0.59
SMG8-202ENST00000543872 SLC6A9P48067 706 aa11.35□□□□□ -0.59
SMG8-202ENST00000543872 CLDN6P56747 220 aa11.35□□□□□ -0.59
SMG8-202ENST00000543872 DMWDQ09019 674 aa11.35□□□□□ -0.59
SMG8-202ENST00000543872 TCEAL8Q8IYN2 117 aa11.35□□□□□ -0.59
SMG8-202ENST00000543872 OR4D6Q8NGJ1 314 aa11.35□□□□□ -0.59
SMG8-202ENST00000543872 ASB16Q96NS5 453 aa11.35□□□□□ -0.59
SMG8-202ENST00000543872 CREBZFQ9NS37 354 aa11.35□□□□□ -0.59
SMG8-202ENST00000543872 FBXL17Q9UF56 701 aa11.35□□□□□ -0.59
SMG8-202ENST00000543872 FBXL21Q9UKT6 434 aa11.35□□□□□ -0.59
SMG8-202ENST00000543872 C11orf98E9PRG8 122 aa11.34□□□□□ -0.59
SMG8-202ENST00000543872 LMX1BO60663 402 aa11.34□□□□□ -0.59
SMG8-202ENST00000543872 QDPRP09417 244 aa11.34□□□□□ -0.59
SMG8-202ENST00000543872 CMPK1P30085 196 aa11.34□□□□□ -0.59
SMG8-202ENST00000543872 PMELP40967 661 aa11.34□□□□□ -0.59
SMG8-202ENST00000543872 HNRNPKP61978 463 aaKnown RBP eCLIP11.34□□□□□ -0.59
SMG8-202ENST00000543872 MESP2Q0VG99 397 aa11.34□□□□□ -0.59
SMG8-202ENST00000543872 VN1R4Q7Z5H5 301 aa11.34□□□□□ -0.59
SMG8-202ENST00000543872 DEFB128Q7Z7B8 93 aa11.34□□□□□ -0.59
SMG8-202ENST00000543872 MESP1Q9BRJ9 268 aa11.34□□□□□ -0.59
SMG8-202ENST00000543872 TCEAL2Q9H3H9 227 aaPredicted RBP11.34□□□□□ -0.59
SMG8-202ENST00000543872 CRLF2Q9HC73 371 aa11.34□□□□□ -0.59
SMG8-202ENST00000543872 GDF2Q9UK05 429 aaPredicted RBP11.34□□□□□ -0.59
SMG8-202ENST00000543872 RTTNQ86VV8 2226 aa11.34□□□□□ -0.59
SMG8-202ENST00000543872 HTTP42858 3142 aa11.34□□□□□ -0.59
SMG8-202ENST00000543872 WIPF3A6NGB9 483 aa11.34□□□□□ -0.59
SMG8-202ENST00000543872 IGLON5A6NGN9 336 aa11.34□□□□□ -0.59
SMG8-202ENST00000543872 PPP1R2P9O14990 202 aa11.34□□□□□ -0.59
SMG8-202ENST00000543872 CSTAP01040 98 aa11.34□□□□□ -0.59
SMG8-202ENST00000543872 IFNA10P01566 189 aa11.34□□□□□ -0.59
SMG8-202ENST00000543872 PRNPP04156 253 aa11.34□□□□□ -0.59
SMG8-202ENST00000543872 CCR2P41597 374 aa11.34□□□□□ -0.59
SMG8-202ENST00000543872 PRPS1P60891 318 aa11.34□□□□□ -0.59
SMG8-202ENST00000543872 RPS23P62266 143 aaKnown RBP11.34□□□□□ -0.59
SMG8-202ENST00000543872 CDK3Q00526 305 aa11.34□□□□□ -0.59
SMG8-202ENST00000543872 MFGE8Q08431 387 aaPredicted RBP11.34□□□□□ -0.59
SMG8-202ENST00000543872 ANKRD55Q3KP44 614 aa11.34□□□□□ -0.59
SMG8-202ENST00000543872 C4orf17Q53FE4 359 aa11.34□□□□□ -0.59
SMG8-202ENST00000543872 FAM166AQ6J272 317 aa11.34□□□□□ -0.59
SMG8-202ENST00000543872 PRSS41Q7RTY9 318 aa11.34□□□□□ -0.59
SMG8-202ENST00000543872 MFSD9Q8NBP5 474 aa11.34□□□□□ -0.59
SMG8-202ENST00000543872 OR52R1Q8NGF1 315 aa11.34□□□□□ -0.59
SMG8-202ENST00000543872 CYYR1Q96J86 154 aa11.34□□□□□ -0.59
SMG8-202ENST00000543872 AQP10Q96PS8 301 aa11.34□□□□□ -0.59
SMG8-202ENST00000543872 CNTNAP3Q9BZ76 1288 aa11.34□□□□□ -0.59
SMG8-202ENST00000543872 LSM5Q9Y4Y9 91 aaKnown RBP11.34□□□□□ -0.59
SMG8-202ENST00000543872 B3GALT2O43825 422 aa11.34□□□□□ -0.59
SMG8-202ENST00000543872 RPL12P30050 165 aaKnown RBP11.34□□□□□ -0.59
SMG8-202ENST00000543872 TOMM34Q15785 309 aaPredicted RBP11.34□□□□□ -0.59
SMG8-202ENST00000543872 LBHQ53QV2 105 aaPredicted RBP11.34□□□□□ -0.59
SMG8-202ENST00000543872 TMEM52Q8NDY8 209 aa11.34□□□□□ -0.59
SMG8-202ENST00000543872 OR13C3Q8NGS6 347 aa11.34□□□□□ -0.59
SMG8-202ENST00000543872 OR14K1Q8NGZ2 314 aa11.34□□□□□ -0.59
SMG8-202ENST00000543872 OR6X1Q8NH79 312 aa11.34□□□□□ -0.59
SMG8-202ENST00000543872 ASB5Q8WWX0 329 aa11.34□□□□□ -0.59
SMG8-202ENST00000543872 K7EPK0 472 aa11.33□□□□□ -0.6
SMG8-202ENST00000543872 PQBP1O60828 265 aaKnown RBP11.33□□□□□ -0.6
SMG8-202ENST00000543872 KNG1P01042 644 aa11.33□□□□□ -0.6
SMG8-202ENST00000543872 IGKV1D-16P01601 117 aa11.33□□□□□ -0.6
SMG8-202ENST00000543872 CD37P11049 281 aa11.33□□□□□ -0.6
SMG8-202ENST00000543872 SELPP16109 830 aa11.33□□□□□ -0.6
SMG8-202ENST00000543872 CRABP1P29762 137 aa11.33□□□□□ -0.6
SMG8-202ENST00000543872 SNCAP37840 140 aa11.33□□□□□ -0.6
SMG8-202ENST00000543872 GNALP38405 381 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms