RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 LCATP04180 440 aa11.01□□□□□ -0.65
RTN3-212ENST00000543123 GATA4P43694 442 aa11.01□□□□□ -0.65
RTN3-212ENST00000543123 MTNR1AP48039 350 aa11.01□□□□□ -0.65
RTN3-212ENST00000543123 SEC61A1P61619 476 aaKnown RBP11.01□□□□□ -0.65
RTN3-212ENST00000543123 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.01□□□□□ -0.65
RTN3-212ENST00000543123 FOXL1Q12952 345 aa11.01□□□□□ -0.65
RTN3-212ENST00000543123 GK2Q14410 553 aaPredicted RBP11.01□□□□□ -0.65
RTN3-212ENST00000543123 KCNJ8Q15842 424 aa11.01□□□□□ -0.65
RTN3-212ENST00000543123 KRTAP27-1Q3LI81 207 aa11.01□□□□□ -0.65
RTN3-212ENST00000543123 CFAP77Q6ZQR2 320 aa11.01□□□□□ -0.65
RTN3-212ENST00000543123 DOK3Q7L591 496 aa11.01□□□□□ -0.65
RTN3-212ENST00000543123 MRPL21Q7Z2W9 205 aaKnown RBP11.01□□□□□ -0.65
RTN3-212ENST00000543123 KLBQ86Z14 1044 aa11.01□□□□□ -0.65
RTN3-212ENST00000543123 LINC00346Q8IVM7 164 aa11.01□□□□□ -0.65
RTN3-212ENST00000543123 ZDHHC21Q8IVQ6 265 aa11.01□□□□□ -0.65
RTN3-212ENST00000543123 SIGLECL1Q8N7X8 197 aa11.01□□□□□ -0.65
RTN3-212ENST00000543123 ZDHHC22Q8N966 263 aa11.01□□□□□ -0.65
RTN3-212ENST00000543123 SDR9C7Q8NEX9 313 aa11.01□□□□□ -0.65
RTN3-212ENST00000543123 PROKR2Q8NFJ6 384 aa11.01□□□□□ -0.65
RTN3-212ENST00000543123 OR52E2Q8NGJ4 325 aa11.01□□□□□ -0.65
RTN3-212ENST00000543123 OR2T4Q8NH00 348 aa11.01□□□□□ -0.65
RTN3-212ENST00000543123 ZNF420Q8TAQ5 688 aaPredicted RBP11.01□□□□□ -0.65
RTN3-212ENST00000543123 CDRT15Q96T59 188 aa11.01□□□□□ -0.65
RTN3-212ENST00000543123 PLA2G12AQ9BZM1 189 aa11.01□□□□□ -0.65
RTN3-212ENST00000543123 WDR76Q9H967 626 aa11.01□□□□□ -0.65
RTN3-212ENST00000543123 ESM1Q9NQ30 184 aa11.01□□□□□ -0.65
RTN3-212ENST00000543123 PPIAL4AQ9Y536 164 aa11.01□□□□□ -0.65
RTN3-212ENST00000543123 CDH10Q9Y6N8 788 aa11.01□□□□□ -0.65
RTN3-212ENST00000543123 OR6C68A6NDL8 312 aa11□□□□□ -0.65
RTN3-212ENST00000543123 M0R135 149 aa11□□□□□ -0.65
RTN3-212ENST00000543123 CYB5R3P00387 301 aaPredicted RBP11□□□□□ -0.65
RTN3-212ENST00000543123 WNT2P09544 360 aa11□□□□□ -0.65
RTN3-212ENST00000543123 PRTN3P24158 256 aa11□□□□□ -0.65
RTN3-212ENST00000543123 GGT2P36268 569 aa11□□□□□ -0.65
RTN3-212ENST00000543123 PITPNBP48739 271 aa11□□□□□ -0.65
RTN3-212ENST00000543123 ZNF404Q494X3 552 aa11□□□□□ -0.65
RTN3-212ENST00000543123 CLEC12AQ5QGZ9 265 aa11□□□□□ -0.65
RTN3-212ENST00000543123 PGBD2Q6P3X8 592 aa11□□□□□ -0.65
RTN3-212ENST00000543123 Q8TCH9 128 aa11□□□□□ -0.65
RTN3-212ENST00000543123 SLC25A28Q96A46 364 aa11□□□□□ -0.65
RTN3-212ENST00000543123 ZNF799Q96GE5 643 aa11□□□□□ -0.65
RTN3-212ENST00000543123 MS4A7Q9GZW8 240 aaPredicted RBP11□□□□□ -0.65
RTN3-212ENST00000543123 OPA3Q9H6K4 179 aa11□□□□□ -0.65
RTN3-212ENST00000543123 TMEM165Q9HC07 324 aa11□□□□□ -0.65
RTN3-212ENST00000543123 TRIM36Q9NQ86 728 aa11□□□□□ -0.65
RTN3-212ENST00000543123 CD300AQ9UGN4 299 aa11□□□□□ -0.65
RTN3-212ENST00000543123 ARL2BPQ9Y2Y0 163 aa11□□□□□ -0.65
RTN3-212ENST00000543123 IGHV2-70DA0A0C4DH43 119 aa10.99□□□□□ -0.65
RTN3-212ENST00000543123 H0YL77 283 aa10.99□□□□□ -0.65
RTN3-212ENST00000543123 PHYHO14832 338 aa10.99□□□□□ -0.65
RTN3-212ENST00000543123 CD200P41217 278 aa10.99□□□□□ -0.65
RTN3-212ENST00000543123 PAX8Q06710 450 aa10.99□□□□□ -0.65
RTN3-212ENST00000543123 MZT1Q08AG7 82 aa10.99□□□□□ -0.65
RTN3-212ENST00000543123 BAMBIQ13145 260 aa10.99□□□□□ -0.65
RTN3-212ENST00000543123 HNRNPA0Q13151 305 aaKnown RBP10.99□□□□□ -0.65
RTN3-212ENST00000543123 OR8G1Q15617 311 aa10.99□□□□□ -0.65
RTN3-212ENST00000543123 AWAT1Q58HT5 328 aa10.99□□□□□ -0.65
RTN3-212ENST00000543123 SLC35F1Q5T1Q4 408 aa10.99□□□□□ -0.65
RTN3-212ENST00000543123 DRAM2Q6UX65 266 aa10.99□□□□□ -0.65
RTN3-212ENST00000543123 DCDC5Q6ZRR9 648 aa10.99□□□□□ -0.65
RTN3-212ENST00000543123 DEFB107AQ8IZN7 70 aa10.99□□□□□ -0.65
RTN3-212ENST00000543123 PARP8Q8N3A8 854 aa10.99□□□□□ -0.65
RTN3-212ENST00000543123 PLPP7Q8NBV4 271 aa10.99□□□□□ -0.65
RTN3-212ENST00000543123 RAB40AQ8WXH6 277 aa10.99□□□□□ -0.65
RTN3-212ENST00000543123 SLCO4A1Q96BD0 722 aa10.99□□□□□ -0.65
RTN3-212ENST00000543123 TMEM246Q9BRR3 403 aa10.99□□□□□ -0.65
RTN3-212ENST00000543123 TRIM15Q9C019 465 aa10.99□□□□□ -0.65
RTN3-212ENST00000543123 FN3KQ9H479 309 aa10.99□□□□□ -0.65
RTN3-212ENST00000543123 FN3KRPQ9HA64 309 aa10.99□□□□□ -0.65
RTN3-212ENST00000543123 TBC1D23Q9NUY8 699 aa10.99□□□□□ -0.65
RTN3-212ENST00000543123 KIF17Q9P2E2 1029 aa10.99□□□□□ -0.65
RTN3-212ENST00000543123 CLN8Q9UBY8 286 aa10.99□□□□□ -0.65
RTN3-212ENST00000543123 ZNF69Q9UC07 566 aa10.99□□□□□ -0.65
RTN3-212ENST00000543123 BAIAP2Q9UQB8 552 aa10.99□□□□□ -0.65
RTN3-212ENST00000543123 ARHGAP32A7KAX9 2087 aa10.99□□□□□ -0.65
RTN3-212ENST00000543123 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.98□□□□□ -0.65
RTN3-212ENST00000543123 DNAJC9-AS1A6NH13 148 aa10.98□□□□□ -0.65
RTN3-212ENST00000543123 CLDN34H7C241 214 aa10.98□□□□□ -0.65
RTN3-212ENST00000543123 TNFRSF11BO00300 401 aa10.98□□□□□ -0.65
RTN3-212ENST00000543123 SPRY1O43609 319 aaPredicted RBP10.98□□□□□ -0.65
RTN3-212ENST00000543123 GMDSO60547 372 aa10.98□□□□□ -0.65
RTN3-212ENST00000543123 CCNB2O95067 398 aa10.98□□□□□ -0.65
RTN3-212ENST00000543123 ZNF205O95201 554 aa10.98□□□□□ -0.65
RTN3-212ENST00000543123 HLA-DPB1P04440 258 aa10.98□□□□□ -0.65
RTN3-212ENST00000543123 HKR1P10072 659 aa10.98□□□□□ -0.65
RTN3-212ENST00000543123 CD80P33681 288 aa10.98□□□□□ -0.65
RTN3-212ENST00000543123 MSX2P35548 267 aaPredicted RBP10.98□□□□□ -0.65
RTN3-212ENST00000543123 NPY4RP50391 375 aa10.98□□□□□ -0.65
RTN3-212ENST00000543123 HMGA2P52926 109 aa10.98□□□□□ -0.65
RTN3-212ENST00000543123 BLVRAP53004 296 aa10.98□□□□□ -0.65
RTN3-212ENST00000543123 TAF13Q15543 124 aa10.98□□□□□ -0.65
RTN3-212ENST00000543123 RSPO1Q2MKA7 263 aaPredicted RBP10.98□□□□□ -0.65
RTN3-212ENST00000543123 TUSC1Q2TAM9 212 aa10.98□□□□□ -0.65
RTN3-212ENST00000543123 KLF17Q5JT82 389 aaPredicted RBP10.98□□□□□ -0.65
RTN3-212ENST00000543123 RASSF6Q6ZTQ3 369 aa10.98□□□□□ -0.65
RTN3-212ENST00000543123 C9orf139Q6ZV77 190 aa10.98□□□□□ -0.65
RTN3-212ENST00000543123 ARHGAP24Q8N264 748 aa10.98□□□□□ -0.65
RTN3-212ENST00000543123 SPERTQ8NA61 448 aa10.98□□□□□ -0.65
RTN3-212ENST00000543123 UPRTQ96BW1 309 aa10.98□□□□□ -0.65
RTN3-212ENST00000543123 MAP6Q96JE9 813 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms