RNA–Protein interactions for RNA: ENST00000543115.5

PTPN6-220, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-220ENST00000543115 NTN4Q9HB63 628 aa10.09□□□□□ -0.79
PTPN6-220ENST00000543115 IL1RAPQ9NPH3 570 aa10.09□□□□□ -0.79
PTPN6-220ENST00000543115 DDX28Q9NUL7 540 aaKnown RBP10.09□□□□□ -0.79
PTPN6-220ENST00000543115 ARL8BQ9NVJ2 186 aa10.09□□□□□ -0.79
PTPN6-220ENST00000543115 OR5V1Q9UGF6 321 aa10.09□□□□□ -0.79
PTPN6-220ENST00000543115 LRCH1Q9Y2L9 728 aa10.09□□□□□ -0.79
PTPN6-220ENST00000543115 IGHV3OR16-10A0A075B7F0 116 aa10.08□□□□□ -0.8
PTPN6-220ENST00000543115 DNAJC9-AS1A6NH13 148 aa10.08□□□□□ -0.8
PTPN6-220ENST00000543115 IFNL4K9M1U5 179 aa10.08□□□□□ -0.8
PTPN6-220ENST00000543115 HLA-DQA2P01906 255 aa10.08□□□□□ -0.8
PTPN6-220ENST00000543115 LCATP04180 440 aa10.08□□□□□ -0.8
PTPN6-220ENST00000543115 IGHV4-38-2P0DP08 117 aa10.08□□□□□ -0.8
PTPN6-220ENST00000543115 RPS2P15880 293 aaKnown RBP10.08□□□□□ -0.8
PTPN6-220ENST00000543115 PYCR1P32322 319 aa10.08□□□□□ -0.8
PTPN6-220ENST00000543115 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.08□□□□□ -0.8
PTPN6-220ENST00000543115 MPPED2Q15777 294 aa10.08□□□□□ -0.8
PTPN6-220ENST00000543115 ZNF181Q2M3W8 571 aa10.08□□□□□ -0.8
PTPN6-220ENST00000543115 ZNF404Q494X3 552 aa10.08□□□□□ -0.8
PTPN6-220ENST00000543115 SLC36A3Q495N2 470 aa10.08□□□□□ -0.8
PTPN6-220ENST00000543115 SAMD4BQ5PRF9 694 aaKnown RBP10.08□□□□□ -0.8
PTPN6-220ENST00000543115 ZNF362Q5T0B9 420 aaPredicted RBP10.08□□□□□ -0.8
PTPN6-220ENST00000543115 PRAMEF6Q5VXH4 476 aa10.08□□□□□ -0.8
PTPN6-220ENST00000543115 LYPD2Q6UXB3 125 aa10.08□□□□□ -0.8
PTPN6-220ENST00000543115 ZDHHC21Q8IVQ6 265 aa10.08□□□□□ -0.8
PTPN6-220ENST00000543115 CYB561A3Q8NBI2 242 aa10.08□□□□□ -0.8
PTPN6-220ENST00000543115 C19orf18Q8NEA5 215 aa10.08□□□□□ -0.8
PTPN6-220ENST00000543115 OR9Q2Q8NGE9 314 aa10.08□□□□□ -0.8
PTPN6-220ENST00000543115 OR8D4Q8NGM9 314 aa10.08□□□□□ -0.8
PTPN6-220ENST00000543115 OR2AJ1Q8NGZ0 328 aa10.08□□□□□ -0.8
PTPN6-220ENST00000543115 GNPDA2Q8TDQ7 276 aa10.08□□□□□ -0.8
PTPN6-220ENST00000543115 MCUR1Q96AQ8 359 aa10.08□□□□□ -0.8
PTPN6-220ENST00000543115 SLCO4A1Q96BD0 722 aa10.08□□□□□ -0.8
PTPN6-220ENST00000543115 BTBD10Q9BSF8 475 aa10.08□□□□□ -0.8
PTPN6-220ENST00000543115 CDADC1Q9BWV3 514 aa10.08□□□□□ -0.8
PTPN6-220ENST00000543115 HCAR1Q9BXC0 346 aa10.08□□□□□ -0.8
PTPN6-220ENST00000543115 TMEM100Q9NV29 134 aa10.08□□□□□ -0.8
PTPN6-220ENST00000543115 LYVE1Q9Y5Y7 322 aa10.08□□□□□ -0.8
PTPN6-220ENST00000543115 IGHV2-70DA0A0C4DH43 119 aa10.07□□□□□ -0.8
PTPN6-220ENST00000543115 TVP23AA6NH52 213 aa10.07□□□□□ -0.8
PTPN6-220ENST00000543115 M0R135 149 aa10.07□□□□□ -0.8
PTPN6-220ENST00000543115 BHLHE40O14503 412 aa10.07□□□□□ -0.8
PTPN6-220ENST00000543115 IDH3BO43837 385 aa10.07□□□□□ -0.8
PTPN6-220ENST00000543115 HKR1P10072 659 aa10.07□□□□□ -0.8
PTPN6-220ENST00000543115 PRTN3P24158 256 aa10.07□□□□□ -0.8
PTPN6-220ENST00000543115 IFNGR2P38484 337 aa10.07□□□□□ -0.8
PTPN6-220ENST00000543115 GATA4P43694 442 aa10.07□□□□□ -0.8
PTPN6-220ENST00000543115 RAD23AP54725 363 aa10.07□□□□□ -0.8
PTPN6-220ENST00000543115 GYS2P54840 703 aa10.07□□□□□ -0.8
PTPN6-220ENST00000543115 GNB2P62879 340 aa10.07□□□□□ -0.8
PTPN6-220ENST00000543115 PPP1R8Q12972 351 aaKnown RBP10.07□□□□□ -0.8
PTPN6-220ENST00000543115 ECH1Q13011 328 aa10.07□□□□□ -0.8
PTPN6-220ENST00000543115 SNAI3Q3KNW1 292 aa10.07□□□□□ -0.8
PTPN6-220ENST00000543115 RBMS3Q6XE24 437 aaKnown RBP10.07□□□□□ -0.8
PTPN6-220ENST00000543115 PGAP1Q75T13 922 aa10.07□□□□□ -0.8
PTPN6-220ENST00000543115 CPLX4Q7Z7G2 160 aa10.07□□□□□ -0.8
PTPN6-220ENST00000543115 DEFB107AQ8IZN7 70 aa10.07□□□□□ -0.8
PTPN6-220ENST00000543115 PARP8Q8N3A8 854 aa10.07□□□□□ -0.8
PTPN6-220ENST00000543115 OR51L1Q8NGJ5 315 aa10.07□□□□□ -0.8
PTPN6-220ENST00000543115 TAF15Q92804 592 aaKnown RBP eCLIP10.07□□□□□ -0.8
PTPN6-220ENST00000543115 NEIL1Q96FI4 390 aaPredicted RBP10.07□□□□□ -0.8
PTPN6-220ENST00000543115 ZNF799Q96GE5 643 aa10.07□□□□□ -0.8
PTPN6-220ENST00000543115 NSRP1Q9H0G5 558 aaKnown RBP10.07□□□□□ -0.8
PTPN6-220ENST00000543115 UFSP2Q9NUQ7 469 aa10.07□□□□□ -0.8
PTPN6-220ENST00000543115 MIOXQ9UGB7 285 aa10.07□□□□□ -0.8
PTPN6-220ENST00000543115 TAGLN3Q9UI15 199 aa10.07□□□□□ -0.8
PTPN6-220ENST00000543115 TMCC3Q9ULS5 477 aa10.07□□□□□ -0.8
PTPN6-220ENST00000543115 CDH10Q9Y6N8 788 aa10.07□□□□□ -0.8
PTPN6-220ENST00000543115 TRAV40A0A0B4J280 105 aa10.06□□□□□ -0.8
PTPN6-220ENST00000543115 SPRY1O43609 319 aaPredicted RBP10.06□□□□□ -0.8
PTPN6-220ENST00000543115 FAM20BO75063 409 aa10.06□□□□□ -0.8
PTPN6-220ENST00000543115 FSTL3O95633 263 aa10.06□□□□□ -0.8
PTPN6-220ENST00000543115 GASTP01350 101 aa10.06□□□□□ -0.8
PTPN6-220ENST00000543115 ATP6V1B2P21281 511 aa10.06□□□□□ -0.8
PTPN6-220ENST00000543115 CA6P23280 308 aa10.06□□□□□ -0.8
PTPN6-220ENST00000543115 CD200P41217 278 aa10.06□□□□□ -0.8
PTPN6-220ENST00000543115 HMGA2P52926 109 aa10.06□□□□□ -0.8
PTPN6-220ENST00000543115 TPTEP56180 551 aa10.06□□□□□ -0.8
PTPN6-220ENST00000543115 ZNF92Q03936 586 aa10.06□□□□□ -0.8
PTPN6-220ENST00000543115 MALLQ13021 153 aa10.06□□□□□ -0.8
PTPN6-220ENST00000543115 BAMBIQ13145 260 aa10.06□□□□□ -0.8
PTPN6-220ENST00000543115 ZNF770Q6IQ21 691 aaPredicted RBP10.06□□□□□ -0.8
PTPN6-220ENST00000543115 CYP2R1Q6VVX0 501 aa10.06□□□□□ -0.8
PTPN6-220ENST00000543115 ZNF841Q6ZN19 808 aa10.06□□□□□ -0.8
PTPN6-220ENST00000543115 MRPL21Q7Z2W9 205 aaKnown RBP10.06□□□□□ -0.8
PTPN6-220ENST00000543115 CELF2-AS1Q8N7Q2 184 aa10.06□□□□□ -0.8
PTPN6-220ENST00000543115 SLC37A3Q8NCC5 494 aa10.06□□□□□ -0.8
PTPN6-220ENST00000543115 OR4C15Q8NGM1 316 aa10.06□□□□□ -0.8
PTPN6-220ENST00000543115 OR9Q1Q8NGQ5 310 aa10.06□□□□□ -0.8
PTPN6-220ENST00000543115 OR2AE1Q8NHA4 323 aa10.06□□□□□ -0.8
PTPN6-220ENST00000543115 Q8TCH9 128 aa10.06□□□□□ -0.8
PTPN6-220ENST00000543115 RAB40AQ8WXH6 277 aa10.06□□□□□ -0.8
PTPN6-220ENST00000543115 UPRTQ96BW1 309 aa10.06□□□□□ -0.8
PTPN6-220ENST00000543115 ZMYND19Q96E35 227 aaPredicted RBP10.06□□□□□ -0.8
PTPN6-220ENST00000543115 MS4A7Q9GZW8 240 aaPredicted RBP10.06□□□□□ -0.8
PTPN6-220ENST00000543115 IL20Q9NYY1 176 aa10.06□□□□□ -0.8
PTPN6-220ENST00000543115 PCDHGB1Q9Y5G3 927 aa10.06□□□□□ -0.8
PTPN6-220ENST00000543115 TENM1Q9UKZ4 2725 aa10.05□□□□□ -0.8
PTPN6-220ENST00000543115 KIR2DS1A0A191URI9 304 aa10.05□□□□□ -0.8
PTPN6-220ENST00000543115 MDFIC2A0A1B0GVS7 189 aa10.05□□□□□ -0.8
PTPN6-220ENST00000543115 LRRC30A6NM36 301 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms