RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 AIMP2Q13155 320 aaKnown RBP12.46□□□□□ -0.41
LDB3-207ENST00000542786 TAF13Q15543 124 aa12.46□□□□□ -0.41
LDB3-207ENST00000542786 CSRP2Q16527 193 aa12.46□□□□□ -0.41
LDB3-207ENST00000542786 RNF144BQ7Z419 303 aa12.46□□□□□ -0.41
LDB3-207ENST00000542786 JAGN1Q8N5M9 183 aa12.46□□□□□ -0.41
LDB3-207ENST00000542786 GPX8Q8TED1 209 aa12.46□□□□□ -0.41
LDB3-207ENST00000542786 SSC4DQ8WTU2 575 aa12.46□□□□□ -0.41
LDB3-207ENST00000542786 FOXRED1Q96CU9 486 aaPredicted RBP12.46□□□□□ -0.41
LDB3-207ENST00000542786 FBXO17Q96EF6 278 aa12.46□□□□□ -0.41
LDB3-207ENST00000542786 LYZL4Q96KX0 146 aa12.46□□□□□ -0.41
LDB3-207ENST00000542786 IP6K3Q96PC2 410 aa12.46□□□□□ -0.41
LDB3-207ENST00000542786 TRAF4Q9BUZ4 470 aaPredicted RBP12.46□□□□□ -0.41
LDB3-207ENST00000542786 ULBP2Q9BZM5 246 aa12.46□□□□□ -0.41
LDB3-207ENST00000542786 METTL17Q9H7H0 456 aaPredicted RBP12.46□□□□□ -0.41
LDB3-207ENST00000542786 CNTD2Q9H8S5 307 aa12.46□□□□□ -0.41
LDB3-207ENST00000542786 TMEM138Q9NPI0 162 aa12.46□□□□□ -0.41
LDB3-207ENST00000542786 DIABLOQ9NR28 239 aa12.46□□□□□ -0.41
LDB3-207ENST00000542786 LINC01387J3KSC0 135 aa12.46□□□□□ -0.42
LDB3-207ENST00000542786 CYTIPO60759 359 aa12.46□□□□□ -0.42
LDB3-207ENST00000542786 TRAPPC6AO75865 159 aa12.46□□□□□ -0.42
LDB3-207ENST00000542786 DHFRP00374 187 aa12.46□□□□□ -0.42
LDB3-207ENST00000542786 CELA3AP09093 270 aa12.46□□□□□ -0.42
LDB3-207ENST00000542786 GSTT2BP0CG30 244 aa12.46□□□□□ -0.42
LDB3-207ENST00000542786 PSMB1P20618 241 aaKnown RBP12.46□□□□□ -0.42
LDB3-207ENST00000542786 FCN2Q15485 313 aa12.46□□□□□ -0.42
LDB3-207ENST00000542786 OR1C1Q15619 314 aa12.46□□□□□ -0.42
LDB3-207ENST00000542786 FAM57BQ71RH2 274 aa12.46□□□□□ -0.42
LDB3-207ENST00000542786 NOXA1Q86UR1 476 aa12.46□□□□□ -0.42
LDB3-207ENST00000542786 PAQR4Q8N4S7 273 aaPredicted RBP12.46□□□□□ -0.42
LDB3-207ENST00000542786 MDS2Q8NDY4 140 aa12.46□□□□□ -0.42
LDB3-207ENST00000542786 GJC3Q8NFK1 279 aa12.46□□□□□ -0.42
LDB3-207ENST00000542786 OR14K1Q8NGZ2 314 aa12.46□□□□□ -0.42
LDB3-207ENST00000542786 OR56B4Q8NH76 319 aa12.46□□□□□ -0.42
LDB3-207ENST00000542786 DEDD2Q8WXF8 326 aa12.46□□□□□ -0.42
LDB3-207ENST00000542786 SORCS2Q96PQ0 1159 aa12.46□□□□□ -0.42
LDB3-207ENST00000542786 UQCC2Q9BRT2 126 aa12.46□□□□□ -0.42
LDB3-207ENST00000542786 C20orf85Q9H1P6 137 aa12.46□□□□□ -0.42
LDB3-207ENST00000542786 FBLN5Q9UBX5 448 aa12.46□□□□□ -0.42
LDB3-207ENST00000542786 KNTC1P50748 2209 aa12.45□□□□□ -0.42
LDB3-207ENST00000542786 A0A0A6YYH2 397 aa12.45□□□□□ -0.42
LDB3-207ENST00000542786 A6NJ64 397 aa12.45□□□□□ -0.42
LDB3-207ENST00000542786 CRYGSP22914 178 aa12.45□□□□□ -0.42
LDB3-207ENST00000542786 LHX2P50458 406 aa12.45□□□□□ -0.42
LDB3-207ENST00000542786 UNC119Q13432 240 aa12.45□□□□□ -0.42
LDB3-207ENST00000542786 KRTAP27-1Q3LI81 207 aa12.45□□□□□ -0.42
LDB3-207ENST00000542786 SFRP4Q6FHJ7 346 aaPredicted RBP12.45□□□□□ -0.42
LDB3-207ENST00000542786 OR10K2Q6IF99 312 aa12.45□□□□□ -0.42
LDB3-207ENST00000542786 SEZ6L2Q6UXD5 910 aa12.45□□□□□ -0.42
LDB3-207ENST00000542786 NAA40Q86UY6 237 aa12.45□□□□□ -0.42
LDB3-207ENST00000542786 SULF2Q8IWU5 870 aa12.45□□□□□ -0.42
LDB3-207ENST00000542786 SLC22A24Q8N4F4 322 aa12.45□□□□□ -0.42
LDB3-207ENST00000542786 OR11H7Q8NGC8 314 aa12.45□□□□□ -0.42
LDB3-207ENST00000542786 OR13C9Q8NGT0 318 aa12.45□□□□□ -0.42
LDB3-207ENST00000542786 ZNF775Q96BV0 537 aaPredicted RBP12.45□□□□□ -0.42
LDB3-207ENST00000542786 MS4A3Q96HJ5 214 aa12.45□□□□□ -0.42
LDB3-207ENST00000542786 ZNF845Q96IR2 970 aaPredicted RBP12.45□□□□□ -0.42
LDB3-207ENST00000542786 C1orf147Q96MC9 270 aaPredicted RBP12.45□□□□□ -0.42
LDB3-207ENST00000542786 RBM24Q9BX46 236 aaKnown RBP12.45□□□□□ -0.42
LDB3-207ENST00000542786 ATG5Q9H1Y0 275 aa12.45□□□□□ -0.42
LDB3-207ENST00000542786 OR51J1Q9H342 316 aa12.45□□□□□ -0.42
LDB3-207ENST00000542786 TP63Q9H3D4 680 aaPredicted RBP12.45□□□□□ -0.42
LDB3-207ENST00000542786 TMEM38BQ9NVV0 291 aa12.45□□□□□ -0.42
LDB3-207ENST00000542786 PLA2G3Q9NZ20 509 aa12.45□□□□□ -0.42
LDB3-207ENST00000542786 PAIP2BQ9ULR5 123 aaKnown RBP12.45□□□□□ -0.42
LDB3-207ENST00000542786 IGKV3D-15A0A087WSY6 115 aa12.44□□□□□ -0.42
LDB3-207ENST00000542786 A0A0U1RQV5 110 aa12.44□□□□□ -0.42
LDB3-207ENST00000542786 ABOP16442 354 aa12.44□□□□□ -0.42
LDB3-207ENST00000542786 RAB3AP20336 220 aa12.44□□□□□ -0.42
LDB3-207ENST00000542786 ITGA3P26006 1051 aa12.44□□□□□ -0.42
LDB3-207ENST00000542786 CASRP41180 1078 aa12.44□□□□□ -0.42
LDB3-207ENST00000542786 ZNF84P51523 738 aa12.44□□□□□ -0.42
LDB3-207ENST00000542786 MECP2P51608 486 aaKnown RBP12.44□□□□□ -0.42
LDB3-207ENST00000542786 CLDN18P56856 261 aa12.44□□□□□ -0.42
LDB3-207ENST00000542786 ST3GAL2Q16842 350 aa12.44□□□□□ -0.42
LDB3-207ENST00000542786 MOGAT2Q3SYC2 334 aa12.44□□□□□ -0.42
LDB3-207ENST00000542786 CRIP3Q6Q6R5 217 aa12.44□□□□□ -0.42
LDB3-207ENST00000542786 DOK3Q7L591 496 aa12.44□□□□□ -0.42
LDB3-207ENST00000542786 ABHD12BQ7Z5M8 362 aaPredicted RBP12.44□□□□□ -0.42
LDB3-207ENST00000542786 CDH24Q86UP0 819 aa12.44□□□□□ -0.42
LDB3-207ENST00000542786 PIAS4Q8N2W9 510 aaPredicted RBP12.44□□□□□ -0.42
LDB3-207ENST00000542786 GPR137CQ8N3F9 429 aa12.44□□□□□ -0.42
LDB3-207ENST00000542786 ZNF283Q8N7M2 679 aa12.44□□□□□ -0.42
LDB3-207ENST00000542786 OR5D14Q8NGL3 314 aa12.44□□□□□ -0.42
LDB3-207ENST00000542786 CPT1CQ8TCG5 803 aa12.44□□□□□ -0.42
LDB3-207ENST00000542786 TMEM45BQ96B21 275 aa12.44□□□□□ -0.42
LDB3-207ENST00000542786 ACTR6Q9GZN1 396 aa12.44□□□□□ -0.42
LDB3-207ENST00000542786 FLVCR2Q9UPI3 526 aa12.44□□□□□ -0.42
LDB3-207ENST00000542786 SLC5A6Q9Y289 635 aa12.44□□□□□ -0.42
LDB3-207ENST00000542786 RGS13O14921 159 aa12.44□□□□□ -0.42
LDB3-207ENST00000542786 PEX14O75381 377 aa12.44□□□□□ -0.42
LDB3-207ENST00000542786 BPNT1O95861 308 aa12.44□□□□□ -0.42
LDB3-207ENST00000542786 GNALP38405 381 aa12.44□□□□□ -0.42
LDB3-207ENST00000542786 RFC3P40938 356 aa12.44□□□□□ -0.42
LDB3-207ENST00000542786 CAPZA1P52907 286 aa12.44□□□□□ -0.42
LDB3-207ENST00000542786 SSBP1Q04837 148 aaKnown RBP12.44□□□□□ -0.42
LDB3-207ENST00000542786 RIPPLY2Q5TAB7 128 aa12.44□□□□□ -0.42
LDB3-207ENST00000542786 CD276Q5ZPR3 534 aa12.44□□□□□ -0.42
LDB3-207ENST00000542786 FAAP20Q6NZ36 180 aa12.44□□□□□ -0.42
LDB3-207ENST00000542786 AAED1Q7RTV5 226 aa12.44□□□□□ -0.42
LDB3-207ENST00000542786 LUZP2Q86TE4 346 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms