RNA–Protein interactions for RNA: ENST00000542663.1

CLSTN3-214, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-214ENST00000542663 COX10Q12887 443 aa14.7□□□□□ -0.06
CLSTN3-214ENST00000542663 TRAM2Q15035 370 aa14.7□□□□□ -0.06
CLSTN3-214ENST00000542663 C2orf68Q2NKX9 166 aa14.7□□□□□ -0.06
CLSTN3-214ENST00000542663 CORO6Q6QEF8 472 aa14.7□□□□□ -0.06
CLSTN3-214ENST00000542663 PTCHD4Q6ZW05 846 aa14.7□□□□□ -0.06
CLSTN3-214ENST00000542663 RNF113BQ8IZP6 322 aaKnown RBP14.7□□□□□ -0.06
CLSTN3-214ENST00000542663 PNLDC1Q8NA58 520 aaKnown RBP14.7□□□□□ -0.06
CLSTN3-214ENST00000542663 GJC3Q8NFK1 279 aa14.7□□□□□ -0.06
CLSTN3-214ENST00000542663 ACOT11Q8WXI4 607 aaPredicted RBP14.7□□□□□ -0.06
CLSTN3-214ENST00000542663 SH3GL1Q99961 368 aa14.7□□□□□ -0.06
CLSTN3-214ENST00000542663 FNDC11Q9BVV2 318 aa14.7□□□□□ -0.06
CLSTN3-214ENST00000542663 HCAR1Q9BXC0 346 aa14.7□□□□□ -0.06
CLSTN3-214ENST00000542663 NUAK2Q9H093 628 aa14.7□□□□□ -0.06
CLSTN3-214ENST00000542663 HDHD2Q9H0R4 259 aa14.7□□□□□ -0.06
CLSTN3-214ENST00000542663 RNF7Q9UBF6 113 aa14.7□□□□□ -0.06
CLSTN3-214ENST00000542663 C5orf63A6NC05 138 aa14.69□□□□□ -0.06
CLSTN3-214ENST00000542663 LGALS8O00214 317 aa14.69□□□□□ -0.06
CLSTN3-214ENST00000542663 DCTN6O00399 190 aa14.69□□□□□ -0.06
CLSTN3-214ENST00000542663 ADAM20O43506 726 aa14.69□□□□□ -0.06
CLSTN3-214ENST00000542663 SDHAP31040 664 aa14.69□□□□□ -0.06
CLSTN3-214ENST00000542663 ARF6P62330 175 aa14.69□□□□□ -0.06
CLSTN3-214ENST00000542663 BEND6Q5SZJ8 279 aaPredicted RBP14.69□□□□□ -0.06
CLSTN3-214ENST00000542663 GDPGP1Q6ZNW5 385 aa14.69□□□□□ -0.06
CLSTN3-214ENST00000542663 MBOAT2Q6ZWT7 520 aa14.69□□□□□ -0.06
CLSTN3-214ENST00000542663 VTCN1Q7Z7D3 282 aa14.69□□□□□ -0.06
CLSTN3-214ENST00000542663 NAA40Q86UY6 237 aa14.69□□□□□ -0.06
CLSTN3-214ENST00000542663 PDZD9Q8IXQ8 264 aa14.69□□□□□ -0.06
CLSTN3-214ENST00000542663 SCCPDHQ8NBX0 429 aa14.69□□□□□ -0.06
CLSTN3-214ENST00000542663 NRIP3Q9NQ35 241 aa14.69□□□□□ -0.06
CLSTN3-214ENST00000542663 RPS6KA6Q9UK32 745 aa14.69□□□□□ -0.06
CLSTN3-214ENST00000542663 KMT2CQ8NEZ4 4911 aaKnown RBP14.69□□□□□ -0.06
CLSTN3-214ENST00000542663 ELOVL7A1L3X0 281 aa14.68□□□□□ -0.06
CLSTN3-214ENST00000542663 C3orf80F5H4A9 247 aa14.68□□□□□ -0.06
CLSTN3-214ENST00000542663 PTP4A3O75365 173 aa14.68□□□□□ -0.06
CLSTN3-214ENST00000542663 TSPAN9O75954 239 aa14.68□□□□□ -0.06
CLSTN3-214ENST00000542663 ALX3O95076 343 aa14.68□□□□□ -0.06
CLSTN3-214ENST00000542663 PTBP3O95758 552 aaKnown RBP14.68□□□□□ -0.06
CLSTN3-214ENST00000542663 ACSM4P0C7M7 580 aa14.68□□□□□ -0.06
CLSTN3-214ENST00000542663 IFNA8P32881 189 aa14.68□□□□□ -0.06
CLSTN3-214ENST00000542663 DBPQ10586 325 aaPredicted RBP14.68□□□□□ -0.06
CLSTN3-214ENST00000542663 KPRPQ5T749 579 aaPredicted RBP14.68□□□□□ -0.06
CLSTN3-214ENST00000542663 AGBL2Q5U5Z8 902 aa14.68□□□□□ -0.06
CLSTN3-214ENST00000542663 ZNF730Q6ZMV8 503 aa14.68□□□□□ -0.06
CLSTN3-214ENST00000542663 Q6ZPA2 131 aa14.68□□□□□ -0.06
CLSTN3-214ENST00000542663 BTN2A1Q7KYR7 527 aa14.68□□□□□ -0.06
CLSTN3-214ENST00000542663 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.68□□□□□ -0.06
CLSTN3-214ENST00000542663 BOLLQ8N9W6 283 aaKnown RBP14.68□□□□□ -0.06
CLSTN3-214ENST00000542663 TSSK2Q96PF2 358 aa14.68□□□□□ -0.06
CLSTN3-214ENST00000542663 SEMA6AQ9H2E6 1030 aa14.68□□□□□ -0.06
CLSTN3-214ENST00000542663 DPAGT1Q9H3H5 408 aa14.68□□□□□ -0.06
CLSTN3-214ENST00000542663 SIGLEC7Q9Y286 467 aa14.68□□□□□ -0.06
CLSTN3-214ENST00000542663 POLR1DQ9Y2S0 133 aa14.68□□□□□ -0.06
CLSTN3-214ENST00000542663 NBEAL2Q6ZNJ1 2754 aa14.68□□□□□ -0.06
CLSTN3-214ENST00000542663 FAM220BPB1ANY3 271 aa14.67□□□□□ -0.06
CLSTN3-214ENST00000542663 SOCS2O14508 198 aa14.67□□□□□ -0.06
CLSTN3-214ENST00000542663 OR10H3O60404 316 aa14.67□□□□□ -0.06
CLSTN3-214ENST00000542663 PRB2P02812 416 aaPredicted RBP14.67□□□□□ -0.06
CLSTN3-214ENST00000542663 CSF1P09603 554 aa14.67□□□□□ -0.06
CLSTN3-214ENST00000542663 CDKN2AP42771 156 aaKnown RBP14.67□□□□□ -0.06
CLSTN3-214ENST00000542663 FXYD6P3P58550 94 aa14.67□□□□□ -0.06
CLSTN3-214ENST00000542663 KCNJ8Q15842 424 aa14.67□□□□□ -0.06
CLSTN3-214ENST00000542663 SAMD5Q5TGI4 173 aa14.67□□□□□ -0.06
CLSTN3-214ENST00000542663 CFAP77Q6ZQR2 320 aa14.67□□□□□ -0.06
CLSTN3-214ENST00000542663 SLCO4A1Q96BD0 722 aa14.67□□□□□ -0.06
CLSTN3-214ENST00000542663 GPX7Q96SL4 187 aaPredicted RBP14.67□□□□□ -0.06
CLSTN3-214ENST00000542663 FN3KRPQ9HA64 309 aa14.67□□□□□ -0.06
CLSTN3-214ENST00000542663 ZNRD1Q9P1U0 126 aa14.67□□□□□ -0.06
CLSTN3-214ENST00000542663 IGLV1-36A0A0B4J1U3 117 aa14.66□□□□□ -0.06
CLSTN3-214ENST00000542663 ZNF816-ZNF321PA0A0X1KG74 233 aa14.66□□□□□ -0.06
CLSTN3-214ENST00000542663 OOEPA6NGQ2 149 aa14.66□□□□□ -0.06
CLSTN3-214ENST00000542663 NDUFB2O95178 105 aa14.66□□□□□ -0.06
CLSTN3-214ENST00000542663 GYPAP02724 150 aa14.66□□□□□ -0.06
CLSTN3-214ENST00000542663 IFNW1P05000 195 aa14.66□□□□□ -0.06
CLSTN3-214ENST00000542663 CA6P23280 308 aa14.66□□□□□ -0.06
CLSTN3-214ENST00000542663 ANOS1P23352 680 aa14.66□□□□□ -0.06
CLSTN3-214ENST00000542663 EGR3Q06889 387 aa14.66□□□□□ -0.06
CLSTN3-214ENST00000542663 OR8G1Q15617 311 aa14.66□□□□□ -0.06
CLSTN3-214ENST00000542663 OR8B8Q15620 311 aa14.66□□□□□ -0.06
CLSTN3-214ENST00000542663 GPR139Q6DWJ6 353 aa14.66□□□□□ -0.06
CLSTN3-214ENST00000542663 DHRS7BQ6IAN0 325 aaPredicted RBP14.66□□□□□ -0.06
CLSTN3-214ENST00000542663 VMO1Q7Z5L0 202 aa14.66□□□□□ -0.06
CLSTN3-214ENST00000542663 ADCK1Q86TW2 530 aa14.66□□□□□ -0.06
CLSTN3-214ENST00000542663 FAM90A1Q86YD7 464 aa14.66□□□□□ -0.06
CLSTN3-214ENST00000542663 FGFRL1Q8N441 504 aa14.66□□□□□ -0.06
CLSTN3-214ENST00000542663 OR2T12Q8NG77 320 aa14.66□□□□□ -0.06
CLSTN3-214ENST00000542663 LRTOMTQ8WZ04 291 aa14.66□□□□□ -0.06
CLSTN3-214ENST00000542663 FAM46AQ96IP4 442 aaKnown RBP14.66□□□□□ -0.06
CLSTN3-214ENST00000542663 GMPR2Q9P2T1 348 aaKnown RBP14.66□□□□□ -0.06
CLSTN3-214ENST00000542663 VPREB3Q9UKI3 123 aa14.66□□□□□ -0.06
CLSTN3-214ENST00000542663 IER3IP1Q9Y5U9 82 aa14.66□□□□□ -0.06
CLSTN3-214ENST00000542663 F5H5K5 113 aa14.65□□□□□ -0.06
CLSTN3-214ENST00000542663 DVL1O14640 695 aa14.65□□□□□ -0.06
CLSTN3-214ENST00000542663 MRASO14807 208 aa14.65□□□□□ -0.06
CLSTN3-214ENST00000542663 PPP1R3DO95685 299 aa14.65□□□□□ -0.06
CLSTN3-214ENST00000542663 NPPAP01160 153 aa14.65□□□□□ -0.06
CLSTN3-214ENST00000542663 COQ5Q5HYK3 327 aa14.65□□□□□ -0.06
CLSTN3-214ENST00000542663 SLC18B1Q6NT16 456 aa14.65□□□□□ -0.06
CLSTN3-214ENST00000542663 ZNF826PQ6ZT77 177 aa14.65□□□□□ -0.06
CLSTN3-214ENST00000542663 PGAP1Q75T13 922 aa14.65□□□□□ -0.06
CLSTN3-214ENST00000542663 TSEN54Q7Z6J9 526 aaKnown RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms