RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 LINC00052Q96N35 136 aa7.67□□□□□ -1.18
THBS3-210ENST00000541576 AIFM2Q9BRQ8 373 aa7.67□□□□□ -1.18
THBS3-210ENST00000541576 RBM24Q9BX46 236 aaKnown RBP7.67□□□□□ -1.18
THBS3-210ENST00000541576 EMC7Q9NPA0 242 aa7.67□□□□□ -1.18
THBS3-210ENST00000541576 EXTL2Q9UBQ6 330 aa7.67□□□□□ -1.18
THBS3-210ENST00000541576 NUP50Q9UKX7 468 aa7.67□□□□□ -1.18
THBS3-210ENST00000541576 POLR1DQ9Y2S0 133 aa7.67□□□□□ -1.18
THBS3-210ENST00000541576 NOSIPQ9Y314 301 aaKnown RBP7.67□□□□□ -1.18
THBS3-210ENST00000541576 TRBV2A0A0J9YWF9 115 aa7.66□□□□□ -1.18
THBS3-210ENST00000541576 SHISA3A0PJX4 238 aa7.66□□□□□ -1.18
THBS3-210ENST00000541576 AQP7O14520 342 aa7.66□□□□□ -1.18
THBS3-210ENST00000541576 LANCL1O43813 399 aa7.66□□□□□ -1.18
THBS3-210ENST00000541576 APOC3P02656 99 aa7.66□□□□□ -1.18
THBS3-210ENST00000541576 ETV6P41212 452 aa7.66□□□□□ -1.18
THBS3-210ENST00000541576 GDI2P50395 445 aaKnown RBP7.66□□□□□ -1.18
THBS3-210ENST00000541576 ROM1Q03395 351 aa7.66□□□□□ -1.18
THBS3-210ENST00000541576 RNPS1Q15287 305 aaKnown RBP7.66□□□□□ -1.18
THBS3-210ENST00000541576 CORO6Q6QEF8 472 aa7.66□□□□□ -1.18
THBS3-210ENST00000541576 LRRN1Q6UXK5 716 aa7.66□□□□□ -1.18
THBS3-210ENST00000541576 KRT77Q7Z794 578 aa7.66□□□□□ -1.18
THBS3-210ENST00000541576 SIAH3Q8IW03 269 aa7.66□□□□□ -1.18
THBS3-210ENST00000541576 MCEMP1Q8IX19 187 aa7.66□□□□□ -1.18
THBS3-210ENST00000541576 OR13C5Q8NGS8 318 aa7.66□□□□□ -1.18
THBS3-210ENST00000541576 ABHD4Q8TB40 342 aa7.66□□□□□ -1.18
THBS3-210ENST00000541576 ST8SIA4Q92187 359 aa7.66□□□□□ -1.18
THBS3-210ENST00000541576 HYLS1Q96M11 299 aa7.66□□□□□ -1.18
THBS3-210ENST00000541576 KCTD7Q96MP8 289 aa7.66□□□□□ -1.18
THBS3-210ENST00000541576 PDCD1LG2Q9BQ51 273 aa7.66□□□□□ -1.18
THBS3-210ENST00000541576 PRDM14Q9GZV8 571 aa7.66□□□□□ -1.18
THBS3-210ENST00000541576 ELOVL3Q9HB03 270 aa7.66□□□□□ -1.18
THBS3-210ENST00000541576 RBFOX1Q9NWB1 397 aaKnown RBP7.66□□□□□ -1.18
THBS3-210ENST00000541576 CYB5R1Q9UHQ9 305 aa7.66□□□□□ -1.18
THBS3-210ENST00000541576 GSTK1Q9Y2Q3 226 aa7.66□□□□□ -1.18
THBS3-210ENST00000541576 ATMQ13315 3056 aa7.66□□□□□ -1.18
THBS3-210ENST00000541576 SPTA1P02549 2419 aa7.66□□□□□ -1.18
THBS3-210ENST00000541576 SPENQ96T58 3664 aaKnown RBP7.66□□□□□ -1.18
THBS3-210ENST00000541576 HSPB2A8KAH6 182 aa7.66□□□□□ -1.18
THBS3-210ENST00000541576 MRPL33O75394 65 aaKnown RBP7.66□□□□□ -1.18
THBS3-210ENST00000541576 ZNF84P51523 738 aa7.66□□□□□ -1.18
THBS3-210ENST00000541576 CCR6P51684 374 aa7.66□□□□□ -1.18
THBS3-210ENST00000541576 TRAM1Q15629 374 aa7.66□□□□□ -1.18
THBS3-210ENST00000541576 HSPB2Q16082 182 aa7.66□□□□□ -1.18
THBS3-210ENST00000541576 FAM27D1Q5T7N8 215 aa7.66□□□□□ -1.18
THBS3-210ENST00000541576 TUSC5Q8IXB3 177 aa7.66□□□□□ -1.18
THBS3-210ENST00000541576 GPR137CQ8N3F9 429 aa7.66□□□□□ -1.18
THBS3-210ENST00000541576 MS4A15Q8N5U1 240 aa7.66□□□□□ -1.18
THBS3-210ENST00000541576 ST7LQ8TDW4 575 aa7.66□□□□□ -1.18
THBS3-210ENST00000541576 BCO1Q9HAY6 547 aa7.66□□□□□ -1.18
THBS3-210ENST00000541576 PARPBPQ9NWS1 579 aa7.66□□□□□ -1.18
THBS3-210ENST00000541576 LHX6Q9UPM6 363 aa7.66□□□□□ -1.18
THBS3-210ENST00000541576 TP53TG5Q9Y2B4 290 aa7.66□□□□□ -1.18
THBS3-210ENST00000541576 A3GALT2U3KPV4 340 aa7.66□□□□□ -1.18
THBS3-210ENST00000541576 NCOA6Q14686 2063 aaPredicted RBP7.65□□□□□ -1.18
THBS3-210ENST00000541576 SLC22A20A6NK97 555 aa7.65□□□□□ -1.18
THBS3-210ENST00000541576 ZNF724A8MTY0 619 aa7.65□□□□□ -1.18
THBS3-210ENST00000541576 RGS9O75916 674 aaPredicted RBP7.65□□□□□ -1.18
THBS3-210ENST00000541576 CD3GP09693 182 aa7.65□□□□□ -1.18
THBS3-210ENST00000541576 M6PRP20645 277 aa7.65□□□□□ -1.18
THBS3-210ENST00000541576 MSR1P21757 451 aa7.65□□□□□ -1.18
THBS3-210ENST00000541576 GALP22466 123 aa7.65□□□□□ -1.18
THBS3-210ENST00000541576 DNASE1P24855 282 aa7.65□□□□□ -1.18
THBS3-210ENST00000541576 RPS11P62280 158 aaKnown RBP eCLIP7.65□□□□□ -1.18
THBS3-210ENST00000541576 KCNMB1Q16558 191 aa7.65□□□□□ -1.18
THBS3-210ENST00000541576 SGCAQ16586 387 aa7.65□□□□□ -1.18
THBS3-210ENST00000541576 PLEKHN1Q494U1 663 aaPredicted RBP7.65□□□□□ -1.18
THBS3-210ENST00000541576 RPUSD3Q6P087 351 aaKnown RBP7.65□□□□□ -1.18
THBS3-210ENST00000541576 ALKAL2Q6UX46 152 aa7.65□□□□□ -1.18
THBS3-210ENST00000541576 IZUMO1Q8IYV9 350 aa7.65□□□□□ -1.18
THBS3-210ENST00000541576 FTMTQ8N4E7 242 aa7.65□□□□□ -1.18
THBS3-210ENST00000541576 OR2T35Q8NGX2 323 aa7.65□□□□□ -1.18
THBS3-210ENST00000541576 OR2AJ1Q8NGZ0 328 aa7.65□□□□□ -1.18
THBS3-210ENST00000541576 SARAFQ96BY9 339 aa7.65□□□□□ -1.18
THBS3-210ENST00000541576 MS4A3Q96HJ5 214 aa7.65□□□□□ -1.18
THBS3-210ENST00000541576 ALKBH3Q96Q83 286 aaPredicted RBP7.65□□□□□ -1.18
THBS3-210ENST00000541576 KCNN2Q9H2S1 579 aa7.65□□□□□ -1.18
THBS3-210ENST00000541576 RNF122Q9H9V4 155 aa7.65□□□□□ -1.18
THBS3-210ENST00000541576 CALHM2Q9HA72 323 aa7.65□□□□□ -1.18
THBS3-210ENST00000541576 CRLF2Q9HC73 371 aa7.65□□□□□ -1.18
THBS3-210ENST00000541576 PLSCR2Q9NRY7 297 aa7.65□□□□□ -1.18
THBS3-210ENST00000541576 B3GNT2Q9NY97 397 aa7.65□□□□□ -1.18
THBS3-210ENST00000541576 PLEKHB1Q9UF11 243 aaPredicted RBP7.65□□□□□ -1.18
THBS3-210ENST00000541576 FREM1Q5H8C1 2179 aa7.65□□□□□ -1.18
THBS3-210ENST00000541576 A0A075B6Q4 140 aa7.65□□□□□ -1.18
THBS3-210ENST00000541576 TRIM77I1YAP6 450 aa7.65□□□□□ -1.18
THBS3-210ENST00000541576 SHOXO15266 292 aa7.65□□□□□ -1.18
THBS3-210ENST00000541576 CD1AP06126 327 aa7.65□□□□□ -1.18
THBS3-210ENST00000541576 FCGR2AP12318 317 aa7.65□□□□□ -1.18
THBS3-210ENST00000541576 RIDAP52758 137 aaKnown RBP7.65□□□□□ -1.18
THBS3-210ENST00000541576 DEFA5Q01523 94 aa7.65□□□□□ -1.18
THBS3-210ENST00000541576 OR7E24Q6IFN5 339 aa7.65□□□□□ -1.18
THBS3-210ENST00000541576 FOXL2NBQ6ZUU3 175 aa7.65□□□□□ -1.18
THBS3-210ENST00000541576 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.65□□□□□ -1.18
THBS3-210ENST00000541576 TCTE3Q8IZS6 198 aa7.65□□□□□ -1.18
THBS3-210ENST00000541576 GDPD1Q8N9F7 314 aa7.65□□□□□ -1.18
THBS3-210ENST00000541576 RPS4Y2Q8TD47 263 aa7.65□□□□□ -1.18
THBS3-210ENST00000541576 GCDHQ92947 438 aaPredicted RBP7.65□□□□□ -1.18
THBS3-210ENST00000541576 ZNF837Q96EG3 531 aaPredicted RBP7.65□□□□□ -1.18
THBS3-210ENST00000541576 NELFAQ9H3P2 528 aa7.65□□□□□ -1.18
THBS3-210ENST00000541576 C1orf198Q9H425 327 aa7.65□□□□□ -1.18
THBS3-210ENST00000541576 FRRS1LQ9P0K9 344 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms