RNA–Protein interactions for RNA: ENST00000540802.1

SOX9-AS1-214, SOX9 antisense RNA 1, humanhuman

TSL 4 BASIC

Gene SOX9-AS1, Length 578 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-214ENST00000540802 PGCP20142 388 aa3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 FKBP2P26885 142 aaKnown RBP3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 SHC1P29353 583 aa3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 PRDX6P30041 224 aa3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 PCGF2P35227 344 aa3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 CHI3L1P36222 383 aaPredicted RBP3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 CHRNA7P36544 502 aa3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 SLC1A3P43003 542 aa3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 CRATP43155 626 aa3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 SLC6A8P48029 635 aa3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 RFX3P48380 749 aa3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 STARP49675 285 aa3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 SMSP52788 366 aa3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 CASP9P55211 416 aa3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 H3F3AP84243 136 aa3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 STX5Q13190 355 aa3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 SELENBP1Q13228 472 aa3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 VEZF1Q14119 521 aa3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 GNA13Q14344 377 aa3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 QPRTQ15274 297 aa3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 MAPRE2Q15555 327 aa3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 ZNF239Q16600 458 aaKnown RBP3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 NDUFAF6Q330K2 333 aa3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 LIN52Q52LA3 116 aa3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 RAET1LQ5VY80 246 aa3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 REP15Q6BDI9 236 aa3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 REEP3Q6NUK4 255 aa3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 C3orf33Q6P1S2 294 aa3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 C3P1Q6ZMU1 363 aa3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 ZNF836Q6ZNA1 936 aa3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 EIF3MQ7L2H7 374 aaKnown RBP3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 C16orf62Q7Z3J2 963 aa3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 SPATA21Q7Z572 469 aa3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 LSMEM1Q8N8F7 131 aa3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 GATSQ8NAP1 163 aa3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 OR5M9Q8NGP3 310 aa3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 OR52P1PQ8NH57 321 aa3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 PNPT1Q8TCS8 783 aaKnown RBP3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 MAL2Q969L2 176 aa3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 LRRC58Q96CX6 371 aa3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 RNF145Q96MT1 663 aa3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 ZNF426Q9BUY5 554 aa3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 THUMPD3Q9BV44 507 aaKnown RBP3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 SFXN3Q9BWM7 321 aa3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 RNF122Q9H9V4 155 aa3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 C12orf10Q9HB07 376 aa3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 ACER3Q9NUN7 267 aa3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 PAQR5Q9NXK6 330 aaPredicted RBP3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 DKKL1Q9UK85 242 aa3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 ZNF443Q9Y2A4 671 aaPredicted RBP3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 RPH3AQ9Y2J0 694 aaPredicted RBP3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 IFT52Q9Y366 437 aa3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 SVEP1Q4LDE5 3571 aa3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 DSCAMO60469 2012 aa3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 ARFGEF3Q5TH69 2177 aa3.41□□□□□ -1.86
SOX9-AS1-214ENST00000540802 USF3Q68DE3 2245 aa3.4□□□□□ -1.86
SOX9-AS1-214ENST00000540802 MED13LQ71F56 2210 aa3.4□□□□□ -1.86
SOX9-AS1-214ENST00000540802 A0A0B4J2E0 115 aa3.4□□□□□ -1.87
SOX9-AS1-214ENST00000540802 A0A1B0GX12 115 aa3.4□□□□□ -1.87
SOX9-AS1-214ENST00000540802 A0A1W2PNV4 684 aa3.4□□□□□ -1.87
SOX9-AS1-214ENST00000540802 CFAP73A6NFT4 308 aa3.4□□□□□ -1.87
SOX9-AS1-214ENST00000540802 ANKRD61A6NGH8 418 aa3.4□□□□□ -1.87
SOX9-AS1-214ENST00000540802 EVPLLA8MZ36 301 aa3.4□□□□□ -1.87
SOX9-AS1-214ENST00000540802 FAM220BPB1ANY3 271 aa3.4□□□□□ -1.87
SOX9-AS1-214ENST00000540802 ANGPT2O15123 496 aa3.4□□□□□ -1.87
SOX9-AS1-214ENST00000540802 FMO6PO60774 539 aa3.4□□□□□ -1.87
SOX9-AS1-214ENST00000540802 CCDC22O60826 627 aa3.4□□□□□ -1.87
SOX9-AS1-214ENST00000540802 SS18L1O75177 396 aaPredicted RBP3.4□□□□□ -1.87
SOX9-AS1-214ENST00000540802 AQP8O94778 261 aa3.4□□□□□ -1.87
SOX9-AS1-214ENST00000540802 LYPD3O95274 346 aa3.4□□□□□ -1.87
SOX9-AS1-214ENST00000540802 ANP32DO95626 131 aa3.4□□□□□ -1.87
SOX9-AS1-214ENST00000540802 LGI1O95970 557 aa3.4□□□□□ -1.87
SOX9-AS1-214ENST00000540802 FAM107AO95990 144 aa3.4□□□□□ -1.87
SOX9-AS1-214ENST00000540802 IGF2P01344 180 aa3.4□□□□□ -1.87
SOX9-AS1-214ENST00000540802 DANCRP0C864 163 aa3.4□□□□□ -1.87
SOX9-AS1-214ENST00000540802 UBTFL6P0CB48 400 aaPredicted RBP3.4□□□□□ -1.87
SOX9-AS1-214ENST00000540802 COX4I1P13073 169 aa3.4□□□□□ -1.87
SOX9-AS1-214ENST00000540802 HPGDP15428 266 aa3.4□□□□□ -1.87
SOX9-AS1-214ENST00000540802 GATA2P23769 480 aaPredicted RBP3.4□□□□□ -1.87
SOX9-AS1-214ENST00000540802 HTR2AP28223 471 aa3.4□□□□□ -1.87
SOX9-AS1-214ENST00000540802 HTR1EP28566 365 aa3.4□□□□□ -1.87
SOX9-AS1-214ENST00000540802 GCKP35557 465 aa3.4□□□□□ -1.87
SOX9-AS1-214ENST00000540802 P2RY4P51582 365 aa3.4□□□□□ -1.87
SOX9-AS1-214ENST00000540802 ZNF41P51814 821 aaPredicted RBP3.4□□□□□ -1.87
SOX9-AS1-214ENST00000540802 MTPNP58546 118 aa3.4□□□□□ -1.87
SOX9-AS1-214ENST00000540802 HERV-K104P61576 105 aa3.4□□□□□ -1.87
SOX9-AS1-214ENST00000540802 HPCAP84074 193 aa3.4□□□□□ -1.87
SOX9-AS1-214ENST00000540802 CDK6Q00534 326 aa3.4□□□□□ -1.87
SOX9-AS1-214ENST00000540802 DMTNQ08495 405 aa3.4□□□□□ -1.87
SOX9-AS1-214ENST00000540802 SNTB1Q13884 538 aaKnown RBP3.4□□□□□ -1.87
SOX9-AS1-214ENST00000540802 CYLC2Q14093 348 aaPredicted RBP3.4□□□□□ -1.87
SOX9-AS1-214ENST00000540802 SCARB2Q14108 478 aa3.4□□□□□ -1.87
SOX9-AS1-214ENST00000540802 PDK3Q15120 406 aa3.4□□□□□ -1.87
SOX9-AS1-214ENST00000540802 PON3Q15166 354 aa3.4□□□□□ -1.87
SOX9-AS1-214ENST00000540802 NRF1Q16656 503 aa3.4□□□□□ -1.87
SOX9-AS1-214ENST00000540802 DUSP7Q16829 419 aa3.4□□□□□ -1.87
SOX9-AS1-214ENST00000540802 GPAT3Q53EU6 434 aa3.4□□□□□ -1.87
SOX9-AS1-214ENST00000540802 SYT14P1Q58G82 188 aa3.4□□□□□ -1.87
SOX9-AS1-214ENST00000540802 TMPPEQ6ZT21 453 aa3.4□□□□□ -1.87
SOX9-AS1-214ENST00000540802 GRINAQ7Z429 371 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms