RNA–Protein interactions for RNA: ENST00000539960.1

PRPF19-204, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 796 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-204ENST00000539960 FAM81AQ8TBF8 368 aa11.45□□□□□ -0.58
PRPF19-204ENST00000539960 GTF3AQ92664 365 aaKnown RBP11.45□□□□□ -0.58
PRPF19-204ENST00000539960 ZNF582Q96NG8 517 aaPredicted RBP11.45□□□□□ -0.58
PRPF19-204ENST00000539960 FAM118AQ9NWS6 357 aa11.45□□□□□ -0.58
PRPF19-204ENST00000539960 IMPAD1Q9NX62 359 aa11.45□□□□□ -0.58
PRPF19-204ENST00000539960 CGGBP1Q9UFW8 167 aaPredicted RBP11.45□□□□□ -0.58
PRPF19-204ENST00000539960 WARS2Q9UGM6 360 aaKnown RBP11.45□□□□□ -0.58
PRPF19-204ENST00000539960 LAMP5Q9UJQ1 280 aa11.45□□□□□ -0.58
PRPF19-204ENST00000539960 ZDHHC8Q9ULC8 765 aa11.45□□□□□ -0.58
PRPF19-204ENST00000539960 KLHDC2Q9Y2U9 406 aa11.45□□□□□ -0.58
PRPF19-204ENST00000539960 TMEM14AQ9Y6G1 99 aa11.45□□□□□ -0.58
PRPF19-204ENST00000539960 C5orf63A6NC05 138 aa11.44□□□□□ -0.58
PRPF19-204ENST00000539960 ZSCAN5BA6NJL1 495 aa11.44□□□□□ -0.58
PRPF19-204ENST00000539960 NDUFS8O00217 210 aa11.44□□□□□ -0.58
PRPF19-204ENST00000539960 SPRY3O43610 288 aa11.44□□□□□ -0.58
PRPF19-204ENST00000539960 IGHV1-46P01743 117 aa11.44□□□□□ -0.58
PRPF19-204ENST00000539960 ADH4P08319 380 aa11.44□□□□□ -0.58
PRPF19-204ENST00000539960 MRPL3P09001 348 aaKnown RBP11.44□□□□□ -0.58
PRPF19-204ENST00000539960 INHBBP09529 407 aa11.44□□□□□ -0.58
PRPF19-204ENST00000539960 COL8A2P25067 703 aa11.44□□□□□ -0.58
PRPF19-204ENST00000539960 HSD11B1P28845 292 aa11.44□□□□□ -0.58
PRPF19-204ENST00000539960 HTR1FP30939 366 aa11.44□□□□□ -0.58
PRPF19-204ENST00000539960 CCL8P80075 99 aa11.44□□□□□ -0.58
PRPF19-204ENST00000539960 MRPS11P82912 194 aaKnown RBP11.44□□□□□ -0.58
PRPF19-204ENST00000539960 CDK5R2Q13319 367 aa11.44□□□□□ -0.58
PRPF19-204ENST00000539960 TMED1Q13445 227 aa11.44□□□□□ -0.58
PRPF19-204ENST00000539960 GK2Q14410 553 aaPredicted RBP11.44□□□□□ -0.58
PRPF19-204ENST00000539960 TRIP10Q15642 601 aa11.44□□□□□ -0.58
PRPF19-204ENST00000539960 ZMAT1Q5H9K5 638 aa11.44□□□□□ -0.58
PRPF19-204ENST00000539960 LPCAT4Q643R3 524 aa11.44□□□□□ -0.58
PRPF19-204ENST00000539960 OR2T2Q6IF00 324 aa11.44□□□□□ -0.58
PRPF19-204ENST00000539960 GALNT4Q8N4A0 578 aa11.44□□□□□ -0.58
PRPF19-204ENST00000539960 ASB17Q8WXJ9 295 aa11.44□□□□□ -0.58
PRPF19-204ENST00000539960 RFKQ969G6 155 aa11.44□□□□□ -0.58
PRPF19-204ENST00000539960 COX4I2Q96KJ9 171 aa11.44□□□□□ -0.58
PRPF19-204ENST00000539960 RDH12Q96NR8 316 aa11.44□□□□□ -0.58
PRPF19-204ENST00000539960 DIRC2Q96SL1 478 aa11.44□□□□□ -0.58
PRPF19-204ENST00000539960 CNN2Q99439 309 aaKnown RBP11.44□□□□□ -0.58
PRPF19-204ENST00000539960 SP140LQ9H930 580 aa11.44□□□□□ -0.58
PRPF19-204ENST00000539960 ADGRL4Q9HBW9 690 aa11.44□□□□□ -0.58
PRPF19-204ENST00000539960 MSL2Q9HCI7 577 aa11.44□□□□□ -0.58
PRPF19-204ENST00000539960 C8orf4Q9NR00 106 aa11.44□□□□□ -0.58
PRPF19-204ENST00000539960 DECR2Q9NUI1 292 aa11.44□□□□□ -0.58
PRPF19-204ENST00000539960 DNAJC27Q9NZQ0 273 aa11.44□□□□□ -0.58
PRPF19-204ENST00000539960 N6AMT1Q9Y5N5 214 aa11.44□□□□□ -0.58
PRPF19-204ENST00000539960 GMPPBQ9Y5P6 360 aa11.44□□□□□ -0.58
PRPF19-204ENST00000539960 LOC100130705A0A1B0GUX0 176 aa11.43□□□□□ -0.58
PRPF19-204ENST00000539960 VWC2LB2RUY7 222 aa11.43□□□□□ -0.58
PRPF19-204ENST00000539960 LYNX1G3V0Z9 82 aa11.43□□□□□ -0.58
PRPF19-204ENST00000539960 DLGAP1O14490 977 aa11.43□□□□□ -0.58
PRPF19-204ENST00000539960 SMAD7O15105 426 aaKnown RBP11.43□□□□□ -0.58
PRPF19-204ENST00000539960 SLC16A6O15403 523 aa11.43□□□□□ -0.58
PRPF19-204ENST00000539960 NCR1O76036 304 aa11.43□□□□□ -0.58
PRPF19-204ENST00000539960 SBK2P0C263 348 aa11.43□□□□□ -0.58
PRPF19-204ENST00000539960 LYNX1P0DP58 116 aa11.43□□□□□ -0.58
PRPF19-204ENST00000539960 SLC2A1P11166 492 aa11.43□□□□□ -0.58
PRPF19-204ENST00000539960 SLC25A16P16260 332 aa11.43□□□□□ -0.58
PRPF19-204ENST00000539960 SELEP16581 610 aa11.43□□□□□ -0.58
PRPF19-204ENST00000539960 GIFP27352 417 aa11.43□□□□□ -0.58
PRPF19-204ENST00000539960 CX3CR1P49238 355 aa11.43□□□□□ -0.58
PRPF19-204ENST00000539960 ROM1Q03395 351 aa11.43□□□□□ -0.58
PRPF19-204ENST00000539960 CARTPTQ16568 116 aa11.43□□□□□ -0.58
PRPF19-204ENST00000539960 OCLNQ16625 522 aa11.43□□□□□ -0.58
PRPF19-204ENST00000539960 TSTQ16762 297 aaKnown RBP11.43□□□□□ -0.58
PRPF19-204ENST00000539960 LRRC36Q1X8D7 754 aa11.43□□□□□ -0.58
PRPF19-204ENST00000539960 SNAI3Q3KNW1 292 aa11.43□□□□□ -0.58
PRPF19-204ENST00000539960 FAM209AQ5JX71 171 aa11.43□□□□□ -0.58
PRPF19-204ENST00000539960 KCTD18Q6PI47 426 aaPredicted RBP11.43□□□□□ -0.58
PRPF19-204ENST00000539960 DEGS2Q6QHC5 323 aa11.43□□□□□ -0.58
PRPF19-204ENST00000539960 LRRN1Q6UXK5 716 aa11.43□□□□□ -0.58
PRPF19-204ENST00000539960 Q6ZR03 302 aa11.43□□□□□ -0.58
PRPF19-204ENST00000539960 PGAP1Q75T13 922 aa11.43□□□□□ -0.58
PRPF19-204ENST00000539960 PRSS45Q7RTY3 260 aa11.43□□□□□ -0.58
PRPF19-204ENST00000539960 KRT77Q7Z794 578 aa11.43□□□□□ -0.58
PRPF19-204ENST00000539960 ZNF540Q8NDQ6 660 aa11.43□□□□□ -0.58
PRPF19-204ENST00000539960 OR8G5Q8NG78 346 aa11.43□□□□□ -0.58
PRPF19-204ENST00000539960 RDH5Q92781 318 aa11.43□□□□□ -0.58
PRPF19-204ENST00000539960 MNTQ99583 582 aa11.43□□□□□ -0.58
PRPF19-204ENST00000539960 REPIN1Q9BWE0 567 aaKnown RBP11.43□□□□□ -0.58
PRPF19-204ENST00000539960 DCLRE1BQ9H816 532 aa11.43□□□□□ -0.58
PRPF19-204ENST00000539960 NIPAL2Q9H841 368 aa11.43□□□□□ -0.58
PRPF19-204ENST00000539960 SMPD3Q9NY59 655 aaPredicted RBP11.43□□□□□ -0.58
PRPF19-204ENST00000539960 TEP1Q99973 2627 aaKnown RBP11.43□□□□□ -0.58
PRPF19-204ENST00000539960 MED13LQ71F56 2210 aa11.42□□□□□ -0.58
PRPF19-204ENST00000539960 IQCF6A8MYZ5 107 aa11.42□□□□□ -0.58
PRPF19-204ENST00000539960 TPD52L2O43399 206 aaKnown RBP11.42□□□□□ -0.58
PRPF19-204ENST00000539960 ENTPD6O75354 484 aa11.42□□□□□ -0.58
PRPF19-204ENST00000539960 ZNF254O75437 659 aa11.42□□□□□ -0.58
PRPF19-204ENST00000539960 ANOS1P23352 680 aa11.42□□□□□ -0.58
PRPF19-204ENST00000539960 ZNF121P58317 390 aaPredicted RBP11.42□□□□□ -0.58
PRPF19-204ENST00000539960 ZNF92Q03936 586 aa11.42□□□□□ -0.58
PRPF19-204ENST00000539960 POU4F2Q12837 409 aa11.42□□□□□ -0.58
PRPF19-204ENST00000539960 RIN1Q13671 783 aa11.42□□□□□ -0.58
PRPF19-204ENST00000539960 GLYATL3Q5SZD4 288 aa11.42□□□□□ -0.58
PRPF19-204ENST00000539960 MEDAGQ5VYS4 303 aa11.42□□□□□ -0.58
PRPF19-204ENST00000539960 USP51Q70EK9 711 aa11.42□□□□□ -0.58
PRPF19-204ENST00000539960 FAM57BQ71RH2 274 aa11.42□□□□□ -0.58
PRPF19-204ENST00000539960 MRPL21Q7Z2W9 205 aaKnown RBP11.42□□□□□ -0.58
PRPF19-204ENST00000539960 BIVMQ86UB2 503 aa11.42□□□□□ -0.58
PRPF19-204ENST00000539960 SLC35F2Q8IXU6 374 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms